co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G78610

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905499: trichome papilla formation	0.00E+00
2	GO:0007638: mechanosensory behavior	0.00E+00
3	GO:0009956: radial pattern formation	1.18E-05
4	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	1.18E-04
5	GO:0010442: guard cell morphogenesis	1.18E-04
6	GO:0033481: galacturonate biosynthetic process	1.18E-04
7	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	1.18E-04
8	GO:0006434: seryl-tRNA aminoacylation	1.18E-04
9	GO:0030388: fructose 1,6-bisphosphate metabolic process	2.73E-04
10	GO:0043039: tRNA aminoacylation	2.73E-04
11	GO:0052541: plant-type cell wall cellulose metabolic process	2.73E-04
12	GO:0009933: meristem structural organization	2.87E-04
13	GO:0009735: response to cytokinin	3.88E-04
14	GO:0090506: axillary shoot meristem initiation	4.52E-04
15	GO:0006000: fructose metabolic process	4.52E-04
16	GO:0015979: photosynthesis	6.44E-04
17	GO:0043572: plastid fission	6.47E-04
18	GO:0007231: osmosensory signaling pathway	6.47E-04
19	GO:0006241: CTP biosynthetic process	6.47E-04
20	GO:0006165: nucleoside diphosphate phosphorylation	6.47E-04
21	GO:0006228: UTP biosynthetic process	6.47E-04
22	GO:0042335: cuticle development	7.29E-04
23	GO:0010305: leaf vascular tissue pattern formation	7.83E-04
24	GO:0006869: lipid transport	7.94E-04
25	GO:0033500: carbohydrate homeostasis	8.60E-04
26	GO:0010037: response to carbon dioxide	8.60E-04
27	GO:0015976: carbon utilization	8.60E-04
28	GO:0009765: photosynthesis, light harvesting	8.60E-04
29	GO:0006183: GTP biosynthetic process	8.60E-04
30	GO:0045727: positive regulation of translation	8.60E-04
31	GO:2000122: negative regulation of stomatal complex development	8.60E-04
32	GO:0006564: L-serine biosynthetic process	1.08E-03
33	GO:0010236: plastoquinone biosynthetic process	1.08E-03
34	GO:0016123: xanthophyll biosynthetic process	1.08E-03
35	GO:0006665: sphingolipid metabolic process	1.08E-03
36	GO:0016120: carotene biosynthetic process	1.08E-03
37	GO:0071805: potassium ion transmembrane transport	1.22E-03
38	GO:0010405: arabinogalactan protein metabolic process	1.33E-03
39	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.33E-03
40	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.33E-03
41	GO:0071555: cell wall organization	1.57E-03
42	GO:0010189: vitamin E biosynthetic process	1.59E-03
43	GO:0048444: floral organ morphogenesis	1.59E-03
44	GO:0010067: procambium histogenesis	1.59E-03
45	GO:0009395: phospholipid catabolic process	1.87E-03
46	GO:0050829: defense response to Gram-negative bacterium	1.87E-03
47	GO:0031540: regulation of anthocyanin biosynthetic process	2.16E-03
48	GO:0007155: cell adhesion	2.16E-03
49	GO:0009658: chloroplast organization	2.39E-03
50	GO:0032544: plastid translation	2.46E-03
51	GO:0006002: fructose 6-phosphate metabolic process	2.46E-03
52	GO:0034765: regulation of ion transmembrane transport	2.78E-03
53	GO:0042761: very long-chain fatty acid biosynthetic process	3.12E-03
54	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.27E-03
55	GO:0018119: peptidyl-cysteine S-nitrosylation	3.82E-03
56	GO:0010015: root morphogenesis	3.82E-03
57	GO:0006816: calcium ion transport	3.82E-03
58	GO:0009773: photosynthetic electron transport in photosystem I	3.82E-03
59	GO:0006813: potassium ion transport	3.84E-03
60	GO:0045454: cell redox homeostasis	3.94E-03
61	GO:0010229: inflorescence development	4.57E-03
62	GO:0006094: gluconeogenesis	4.57E-03
63	GO:0005986: sucrose biosynthetic process	4.57E-03
64	GO:0010207: photosystem II assembly	4.97E-03
65	GO:0010223: secondary shoot formation	4.97E-03
66	GO:0010540: basipetal auxin transport	4.97E-03
67	GO:0009934: regulation of meristem structural organization	4.97E-03
68	GO:0048467: gynoecium development	4.97E-03
69	GO:0010020: chloroplast fission	4.97E-03
70	GO:0019253: reductive pentose-phosphate cycle	4.97E-03
71	GO:0006629: lipid metabolic process	5.14E-03
72	GO:0070588: calcium ion transmembrane transport	5.37E-03
73	GO:0009969: xyloglucan biosynthetic process	5.37E-03
74	GO:0009225: nucleotide-sugar metabolic process	5.37E-03
75	GO:0009825: multidimensional cell growth	5.37E-03
76	GO:0005985: sucrose metabolic process	5.37E-03
77	GO:0010025: wax biosynthetic process	5.79E-03
78	GO:0042023: DNA endoreduplication	5.79E-03
79	GO:0006071: glycerol metabolic process	5.79E-03
80	GO:0019762: glucosinolate catabolic process	5.79E-03
81	GO:0042742: defense response to bacterium	6.55E-03
82	GO:0009768: photosynthesis, light harvesting in photosystem I	6.66E-03
83	GO:0051302: regulation of cell division	6.66E-03
84	GO:0010026: trichome differentiation	6.66E-03
85	GO:0016998: cell wall macromolecule catabolic process	7.11E-03
86	GO:0007005: mitochondrion organization	7.57E-03
87	GO:0080092: regulation of pollen tube growth	7.57E-03
88	GO:0030245: cellulose catabolic process	7.57E-03
89	GO:0009294: DNA mediated transformation	8.05E-03
90	GO:0001944: vasculature development	8.05E-03
91	GO:0010091: trichome branching	8.53E-03
92	GO:0010089: xylem development	8.53E-03
93	GO:0019722: calcium-mediated signaling	8.53E-03
94	GO:0016117: carotenoid biosynthetic process	9.02E-03
95	GO:0007623: circadian rhythm	9.43E-03
96	GO:0045490: pectin catabolic process	9.43E-03
97	GO:0010087: phloem or xylem histogenesis	9.53E-03
98	GO:0042391: regulation of membrane potential	9.53E-03
99	GO:0009741: response to brassinosteroid	1.00E-02
100	GO:0002229: defense response to oomycetes	1.16E-02
101	GO:0007264: small GTPase mediated signal transduction	1.22E-02
102	GO:1901657: glycosyl compound metabolic process	1.28E-02
103	GO:0010252: auxin homeostasis	1.33E-02
104	GO:0007267: cell-cell signaling	1.39E-02
105	GO:0010411: xyloglucan metabolic process	1.70E-02
106	GO:0048481: plant ovule development	1.82E-02
107	GO:0018298: protein-chromophore linkage	1.82E-02
108	GO:0009817: defense response to fungus, incompatible interaction	1.82E-02
109	GO:0000160: phosphorelay signal transduction system	1.89E-02
110	GO:0046777: protein autophosphorylation	1.94E-02
111	GO:0010218: response to far red light	1.96E-02
112	GO:0010119: regulation of stomatal movement	2.02E-02
113	GO:0007568: aging	2.02E-02
114	GO:0009637: response to blue light	2.16E-02
115	GO:0008283: cell proliferation	2.59E-02
116	GO:0010114: response to red light	2.59E-02
117	GO:0009926: auxin polar transport	2.59E-02
118	GO:0042546: cell wall biogenesis	2.66E-02
119	GO:0008643: carbohydrate transport	2.73E-02
120	GO:0009965: leaf morphogenesis	2.81E-02
121	GO:0009736: cytokinin-activated signaling pathway	3.20E-02
122	GO:0009809: lignin biosynthetic process	3.20E-02
123	GO:0006364: rRNA processing	3.20E-02
124	GO:0009409: response to cold	3.78E-02
125	GO:0042545: cell wall modification	4.02E-02
126	GO:0018105: peptidyl-serine phosphorylation	4.19E-02
127	GO:0009742: brassinosteroid mediated signaling pathway	4.28E-02
128	GO:0005975: carbohydrate metabolic process	4.35E-02

Rank	GO Term	Adjusted P value
1	GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity	0.00E+00
2	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
3	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
4	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
5	GO:0051920: peroxiredoxin activity	3.06E-07
6	GO:0016209: antioxidant activity	7.76E-07
7	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	4.17E-05
8	GO:0070006: metalloaminopeptidase activity	1.18E-04
9	GO:0019210: kinase inhibitor activity	1.18E-04
10	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	1.18E-04
11	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.18E-04
12	GO:0004828: serine-tRNA ligase activity	1.18E-04
13	GO:0004617: phosphoglycerate dehydrogenase activity	2.73E-04
14	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	2.73E-04
15	GO:0008967: phosphoglycolate phosphatase activity	2.73E-04
16	GO:0004601: peroxidase activity	3.76E-04
17	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	6.47E-04
18	GO:0004550: nucleoside diphosphate kinase activity	6.47E-04
19	GO:0050378: UDP-glucuronate 4-epimerase activity	8.60E-04
20	GO:0004659: prenyltransferase activity	8.60E-04
21	GO:0009922: fatty acid elongase activity	1.08E-03
22	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.33E-03
23	GO:0008289: lipid binding	1.55E-03
24	GO:0051753: mannan synthase activity	1.59E-03
25	GO:0005242: inward rectifier potassium channel activity	1.59E-03
26	GO:0052747: sinapyl alcohol dehydrogenase activity	2.16E-03
27	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	2.78E-03
28	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.78E-03
29	GO:0030234: enzyme regulator activity	3.46E-03
30	GO:0005089: Rho guanyl-nucleotide exchange factor activity	3.82E-03
31	GO:0004177: aminopeptidase activity	3.82E-03
32	GO:0047372: acylglycerol lipase activity	3.82E-03
33	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.19E-03
34	GO:0008378: galactosyltransferase activity	4.19E-03
35	GO:0004089: carbonate dehydratase activity	4.57E-03
36	GO:0005262: calcium channel activity	4.57E-03
37	GO:0004565: beta-galactosidase activity	4.57E-03
38	GO:0008266: poly(U) RNA binding	4.97E-03
39	GO:0030599: pectinesterase activity	5.14E-03
40	GO:0031409: pigment binding	5.79E-03
41	GO:0004857: enzyme inhibitor activity	6.22E-03
42	GO:0015079: potassium ion transmembrane transporter activity	6.66E-03
43	GO:0008324: cation transmembrane transporter activity	6.66E-03
44	GO:0019843: rRNA binding	6.83E-03
45	GO:0004176: ATP-dependent peptidase activity	7.11E-03
46	GO:0033612: receptor serine/threonine kinase binding	7.11E-03
47	GO:0003824: catalytic activity	7.54E-03
48	GO:0030570: pectate lyase activity	8.05E-03
49	GO:0008810: cellulase activity	8.05E-03
50	GO:0046872: metal ion binding	8.69E-03
51	GO:0005102: receptor binding	9.02E-03
52	GO:0005249: voltage-gated potassium channel activity	9.53E-03
53	GO:0030551: cyclic nucleotide binding	9.53E-03
54	GO:0050662: coenzyme binding	1.06E-02
55	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.16E-02
56	GO:0000156: phosphorelay response regulator activity	1.28E-02
57	GO:0016759: cellulose synthase activity	1.33E-02
58	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.39E-02
59	GO:0008237: metallopeptidase activity	1.39E-02
60	GO:0016597: amino acid binding	1.45E-02
61	GO:0016788: hydrolase activity, acting on ester bonds	1.49E-02
62	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.52E-02
63	GO:0016168: chlorophyll binding	1.57E-02
64	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.63E-02
65	GO:0004683: calmodulin-dependent protein kinase activity	1.70E-02
66	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.70E-02
67	GO:0102483: scopolin beta-glucosidase activity	1.70E-02
68	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.76E-02
69	GO:0005516: calmodulin binding	1.79E-02
70	GO:0004222: metalloendopeptidase activity	1.96E-02
71	GO:0003993: acid phosphatase activity	2.23E-02
72	GO:0008422: beta-glucosidase activity	2.30E-02
73	GO:0005509: calcium ion binding	2.35E-02
74	GO:0051287: NAD binding	2.96E-02
75	GO:0003690: double-stranded DNA binding	3.28E-02
76	GO:0045330: aspartyl esterase activity	3.44E-02
77	GO:0004650: polygalacturonase activity	3.85E-02
78	GO:0022857: transmembrane transporter activity	3.94E-02
79	GO:0003779: actin binding	4.02E-02
80	GO:0016757: transferase activity, transferring glycosyl groups	4.06E-02
81	GO:0004672: protein kinase activity	4.18E-02
82	GO:0016758: transferase activity, transferring hexosyl groups	4.73E-02
83	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0048046: apoplast	3.69E-10
2	GO:0009941: chloroplast envelope	1.34E-06
3	GO:0009507: chloroplast	2.52E-06
4	GO:0005886: plasma membrane	1.11E-05
5	GO:0046658: anchored component of plasma membrane	2.92E-05
6	GO:0031225: anchored component of membrane	3.05E-05
7	GO:0009570: chloroplast stroma	3.71E-05
8	GO:0010319: stromule	8.89E-05
9	GO:0009923: fatty acid elongase complex	1.18E-04
10	GO:0009505: plant-type cell wall	1.19E-04
11	GO:0009536: plastid	5.49E-04
12	GO:0009706: chloroplast inner membrane	7.02E-04
13	GO:0010287: plastoglobule	8.68E-04
14	GO:0009543: chloroplast thylakoid lumen	9.26E-04
15	GO:0005618: cell wall	1.71E-03
16	GO:0009535: chloroplast thylakoid membrane	1.80E-03
17	GO:0009533: chloroplast stromal thylakoid	1.87E-03
18	GO:0009579: thylakoid	2.94E-03
19	GO:0009534: chloroplast thylakoid	2.99E-03
20	GO:0016324: apical plasma membrane	3.46E-03
21	GO:0016021: integral component of membrane	3.86E-03
22	GO:0030095: chloroplast photosystem II	4.97E-03
23	GO:0030076: light-harvesting complex	5.37E-03
24	GO:0005875: microtubule associated complex	5.79E-03
25	GO:0005758: mitochondrial intermembrane space	6.22E-03
26	GO:0009654: photosystem II oxygen evolving complex	6.66E-03
27	GO:0005794: Golgi apparatus	7.31E-03
28	GO:0005576: extracellular region	1.02E-02
29	GO:0000139: Golgi membrane	1.04E-02
30	GO:0009522: photosystem I	1.06E-02
31	GO:0019898: extrinsic component of membrane	1.11E-02
32	GO:0032580: Golgi cisterna membrane	1.33E-02
33	GO:0015934: large ribosomal subunit	2.02E-02
34	GO:0009506: plasmodesma	2.26E-02
35	GO:0005887: integral component of plasma membrane	3.64E-02
36	GO:0016020: membrane	4.90E-02