GO Enrichment Analysis of Co-expressed Genes with
AT1G78060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905499: trichome papilla formation | 0.00E+00 |
| 2 | GO:0015979: photosynthesis | 1.23E-06 |
| 3 | GO:0015995: chlorophyll biosynthetic process | 1.45E-06 |
| 4 | GO:0010025: wax biosynthetic process | 4.03E-06 |
| 5 | GO:0009735: response to cytokinin | 1.07E-05 |
| 6 | GO:0009772: photosynthetic electron transport in photosystem II | 2.70E-05 |
| 7 | GO:0042761: very long-chain fatty acid biosynthetic process | 6.89E-05 |
| 8 | GO:0042759: long-chain fatty acid biosynthetic process | 7.39E-05 |
| 9 | GO:0005991: trehalose metabolic process | 7.39E-05 |
| 10 | GO:0001736: establishment of planar polarity | 1.77E-04 |
| 11 | GO:0090391: granum assembly | 2.99E-04 |
| 12 | GO:0015675: nickel cation transport | 2.99E-04 |
| 13 | GO:0006013: mannose metabolic process | 2.99E-04 |
| 14 | GO:0009958: positive gravitropism | 4.31E-04 |
| 15 | GO:0006986: response to unfolded protein | 4.32E-04 |
| 16 | GO:0051085: chaperone mediated protein folding requiring cofactor | 4.32E-04 |
| 17 | GO:0010239: chloroplast mRNA processing | 4.32E-04 |
| 18 | GO:0009697: salicylic acid biosynthetic process | 7.29E-04 |
| 19 | GO:0006564: L-serine biosynthetic process | 7.29E-04 |
| 20 | GO:0045038: protein import into chloroplast thylakoid membrane | 7.29E-04 |
| 21 | GO:0048497: maintenance of floral organ identity | 7.29E-04 |
| 22 | GO:0006665: sphingolipid metabolic process | 7.29E-04 |
| 23 | GO:0010438: cellular response to sulfur starvation | 7.29E-04 |
| 24 | GO:0010027: thylakoid membrane organization | 7.56E-04 |
| 25 | GO:0009913: epidermal cell differentiation | 8.91E-04 |
| 26 | GO:0003006: developmental process involved in reproduction | 8.91E-04 |
| 27 | GO:0009759: indole glucosinolate biosynthetic process | 8.91E-04 |
| 28 | GO:0010311: lateral root formation | 1.02E-03 |
| 29 | GO:0042372: phylloquinone biosynthetic process | 1.06E-03 |
| 30 | GO:1901259: chloroplast rRNA processing | 1.06E-03 |
| 31 | GO:0006400: tRNA modification | 1.24E-03 |
| 32 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.24E-03 |
| 33 | GO:0010196: nonphotochemical quenching | 1.24E-03 |
| 34 | GO:0006605: protein targeting | 1.43E-03 |
| 35 | GO:0031540: regulation of anthocyanin biosynthetic process | 1.43E-03 |
| 36 | GO:0048564: photosystem I assembly | 1.43E-03 |
| 37 | GO:0045292: mRNA cis splicing, via spliceosome | 1.43E-03 |
| 38 | GO:0006353: DNA-templated transcription, termination | 1.43E-03 |
| 39 | GO:0070413: trehalose metabolism in response to stress | 1.43E-03 |
| 40 | GO:0034765: regulation of ion transmembrane transport | 1.83E-03 |
| 41 | GO:0000373: Group II intron splicing | 1.83E-03 |
| 42 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.05E-03 |
| 43 | GO:0048829: root cap development | 2.28E-03 |
| 44 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.28E-03 |
| 45 | GO:0048765: root hair cell differentiation | 2.51E-03 |
| 46 | GO:0009773: photosynthetic electron transport in photosystem I | 2.51E-03 |
| 47 | GO:0002213: defense response to insect | 2.75E-03 |
| 48 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.75E-03 |
| 49 | GO:0009624: response to nematode | 2.95E-03 |
| 50 | GO:0010229: inflorescence development | 3.00E-03 |
| 51 | GO:0009742: brassinosteroid mediated signaling pathway | 3.12E-03 |
| 52 | GO:0048467: gynoecium development | 3.25E-03 |
| 53 | GO:0010143: cutin biosynthetic process | 3.25E-03 |
| 54 | GO:0042023: DNA endoreduplication | 3.78E-03 |
| 55 | GO:0000162: tryptophan biosynthetic process | 3.78E-03 |
| 56 | GO:0005992: trehalose biosynthetic process | 4.06E-03 |
| 57 | GO:0009695: jasmonic acid biosynthetic process | 4.34E-03 |
| 58 | GO:0019953: sexual reproduction | 4.34E-03 |
| 59 | GO:0031408: oxylipin biosynthetic process | 4.63E-03 |
| 60 | GO:0003333: amino acid transmembrane transport | 4.63E-03 |
| 61 | GO:0016998: cell wall macromolecule catabolic process | 4.63E-03 |
| 62 | GO:0030245: cellulose catabolic process | 4.93E-03 |
| 63 | GO:0010017: red or far-red light signaling pathway | 4.93E-03 |
| 64 | GO:0007623: circadian rhythm | 5.06E-03 |
| 65 | GO:0045490: pectin catabolic process | 5.06E-03 |
| 66 | GO:0009451: RNA modification | 5.18E-03 |
| 67 | GO:0040007: growth | 5.23E-03 |
| 68 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 5.23E-03 |
| 69 | GO:0010091: trichome branching | 5.54E-03 |
| 70 | GO:0007166: cell surface receptor signaling pathway | 5.78E-03 |
| 71 | GO:0080022: primary root development | 6.18E-03 |
| 72 | GO:0042335: cuticle development | 6.18E-03 |
| 73 | GO:0042391: regulation of membrane potential | 6.18E-03 |
| 74 | GO:0010182: sugar mediated signaling pathway | 6.51E-03 |
| 75 | GO:0015986: ATP synthesis coupled proton transport | 6.84E-03 |
| 76 | GO:0042752: regulation of circadian rhythm | 6.84E-03 |
| 77 | GO:0048825: cotyledon development | 7.19E-03 |
| 78 | GO:0016032: viral process | 7.89E-03 |
| 79 | GO:0009828: plant-type cell wall loosening | 8.61E-03 |
| 80 | GO:0010252: auxin homeostasis | 8.61E-03 |
| 81 | GO:0071805: potassium ion transmembrane transport | 8.98E-03 |
| 82 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.00E-02 |
| 83 | GO:0009627: systemic acquired resistance | 1.05E-02 |
| 84 | GO:0010411: xyloglucan metabolic process | 1.09E-02 |
| 85 | GO:0071555: cell wall organization | 1.18E-02 |
| 86 | GO:0009832: plant-type cell wall biogenesis | 1.22E-02 |
| 87 | GO:0000160: phosphorelay signal transduction system | 1.22E-02 |
| 88 | GO:0006865: amino acid transport | 1.34E-02 |
| 89 | GO:0016042: lipid catabolic process | 1.40E-02 |
| 90 | GO:0008283: cell proliferation | 1.66E-02 |
| 91 | GO:0010114: response to red light | 1.66E-02 |
| 92 | GO:0009926: auxin polar transport | 1.66E-02 |
| 93 | GO:0042546: cell wall biogenesis | 1.71E-02 |
| 94 | GO:0009664: plant-type cell wall organization | 1.95E-02 |
| 95 | GO:0009736: cytokinin-activated signaling pathway | 2.05E-02 |
| 96 | GO:0009809: lignin biosynthetic process | 2.05E-02 |
| 97 | GO:0009740: gibberellic acid mediated signaling pathway | 2.53E-02 |
| 98 | GO:0009737: response to abscisic acid | 3.06E-02 |
| 99 | GO:0009058: biosynthetic process | 3.21E-02 |
| 100 | GO:0009845: seed germination | 3.27E-02 |
| 101 | GO:0042744: hydrogen peroxide catabolic process | 3.39E-02 |
| 102 | GO:0009790: embryo development | 3.46E-02 |
| 103 | GO:0040008: regulation of growth | 3.77E-02 |
| 104 | GO:0009739: response to gibberellin | 4.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 2 | GO:0016851: magnesium chelatase activity | 2.80E-06 |
| 3 | GO:0004321: fatty-acyl-CoA synthase activity | 7.39E-05 |
| 4 | GO:0008909: isochorismate synthase activity | 7.39E-05 |
| 5 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 7.39E-05 |
| 6 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 7.39E-05 |
| 7 | GO:0004565: beta-galactosidase activity | 1.31E-04 |
| 8 | GO:0016630: protochlorophyllide reductase activity | 1.77E-04 |
| 9 | GO:0015099: nickel cation transmembrane transporter activity | 1.77E-04 |
| 10 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.77E-04 |
| 11 | GO:0030570: pectate lyase activity | 3.14E-04 |
| 12 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 4.32E-04 |
| 13 | GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | 4.32E-04 |
| 14 | GO:0010011: auxin binding | 5.75E-04 |
| 15 | GO:0010328: auxin influx transmembrane transporter activity | 5.75E-04 |
| 16 | GO:0016791: phosphatase activity | 6.38E-04 |
| 17 | GO:0016597: amino acid binding | 7.15E-04 |
| 18 | GO:0003959: NADPH dehydrogenase activity | 7.29E-04 |
| 19 | GO:0009922: fatty acid elongase activity | 7.29E-04 |
| 20 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 8.91E-04 |
| 21 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 8.91E-04 |
| 22 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.06E-03 |
| 23 | GO:0004559: alpha-mannosidase activity | 1.06E-03 |
| 24 | GO:0005242: inward rectifier potassium channel activity | 1.06E-03 |
| 25 | GO:0030246: carbohydrate binding | 1.36E-03 |
| 26 | GO:0052747: sinapyl alcohol dehydrogenase activity | 1.43E-03 |
| 27 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 1.83E-03 |
| 28 | GO:0016207: 4-coumarate-CoA ligase activity | 1.83E-03 |
| 29 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 2.28E-03 |
| 30 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.53E-03 |
| 31 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 2.75E-03 |
| 32 | GO:0016746: transferase activity, transferring acyl groups | 3.03E-03 |
| 33 | GO:0016829: lyase activity | 3.98E-03 |
| 34 | GO:0005528: FK506 binding | 4.06E-03 |
| 35 | GO:0051087: chaperone binding | 4.34E-03 |
| 36 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.72E-03 |
| 37 | GO:0008810: cellulase activity | 5.23E-03 |
| 38 | GO:0005249: voltage-gated potassium channel activity | 6.18E-03 |
| 39 | GO:0030551: cyclic nucleotide binding | 6.18E-03 |
| 40 | GO:0016740: transferase activity | 6.20E-03 |
| 41 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 6.51E-03 |
| 42 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 7.53E-03 |
| 43 | GO:0004518: nuclease activity | 7.89E-03 |
| 44 | GO:0000156: phosphorelay response regulator activity | 8.25E-03 |
| 45 | GO:0008483: transaminase activity | 8.98E-03 |
| 46 | GO:0005509: calcium ion binding | 1.06E-02 |
| 47 | GO:0052689: carboxylic ester hydrolase activity | 1.07E-02 |
| 48 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.09E-02 |
| 49 | GO:0008236: serine-type peptidase activity | 1.13E-02 |
| 50 | GO:0003746: translation elongation factor activity | 1.39E-02 |
| 51 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.52E-02 |
| 52 | GO:0004519: endonuclease activity | 1.56E-02 |
| 53 | GO:0043621: protein self-association | 1.76E-02 |
| 54 | GO:0015293: symporter activity | 1.80E-02 |
| 55 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.85E-02 |
| 56 | GO:0051287: NAD binding | 1.90E-02 |
| 57 | GO:0016298: lipase activity | 2.10E-02 |
| 58 | GO:0046872: metal ion binding | 2.10E-02 |
| 59 | GO:0015171: amino acid transmembrane transporter activity | 2.21E-02 |
| 60 | GO:0016887: ATPase activity | 2.23E-02 |
| 61 | GO:0016874: ligase activity | 2.53E-02 |
| 62 | GO:0016301: kinase activity | 2.62E-02 |
| 63 | GO:0051082: unfolded protein binding | 2.64E-02 |
| 64 | GO:0019843: rRNA binding | 3.10E-02 |
| 65 | GO:0030170: pyridoxal phosphate binding | 3.33E-02 |
| 66 | GO:0004252: serine-type endopeptidase activity | 3.33E-02 |
| 67 | GO:0005525: GTP binding | 4.19E-02 |
| 68 | GO:0042802: identical protein binding | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010007: magnesium chelatase complex | 1.17E-06 |
| 2 | GO:0005618: cell wall | 1.45E-05 |
| 3 | GO:0009534: chloroplast thylakoid | 2.31E-05 |
| 4 | GO:0009515: granal stacked thylakoid | 7.39E-05 |
| 5 | GO:0009923: fatty acid elongase complex | 7.39E-05 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 4.25E-04 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 5.15E-04 |
| 8 | GO:0005576: extracellular region | 7.71E-04 |
| 9 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 8.91E-04 |
| 10 | GO:0009507: chloroplast | 1.21E-03 |
| 11 | GO:0009986: cell surface | 1.24E-03 |
| 12 | GO:0009570: chloroplast stroma | 1.27E-03 |
| 13 | GO:0048046: apoplast | 1.34E-03 |
| 14 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.63E-03 |
| 15 | GO:0030095: chloroplast photosystem II | 3.25E-03 |
| 16 | GO:0009505: plant-type cell wall | 3.56E-03 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 4.34E-03 |
| 18 | GO:0009579: thylakoid | 6.04E-03 |
| 19 | GO:0009523: photosystem II | 7.19E-03 |
| 20 | GO:0019898: extrinsic component of membrane | 7.19E-03 |
| 21 | GO:0010319: stromule | 8.98E-03 |
| 22 | GO:0005773: vacuole | 9.64E-03 |
| 23 | GO:0031977: thylakoid lumen | 1.57E-02 |
| 24 | GO:0043231: intracellular membrane-bounded organelle | 1.58E-02 |
| 25 | GO:0009941: chloroplast envelope | 2.60E-02 |
| 26 | GO:0010287: plastoglobule | 2.98E-02 |
| 27 | GO:0005886: plasma membrane | 3.26E-02 |
| 28 | GO:0005759: mitochondrial matrix | 3.64E-02 |
| 29 | GO:0005768: endosome | 4.63E-02 |