co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G77690

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006833: water transport	3.07E-06
2	GO:0034220: ion transmembrane transport	1.09E-05
3	GO:0045490: pectin catabolic process	4.49E-05
4	GO:0010442: guard cell morphogenesis	6.58E-05
5	GO:0071370: cellular response to gibberellin stimulus	6.58E-05
6	GO:0006810: transport	1.47E-04
7	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	1.59E-04
8	GO:0030388: fructose 1,6-bisphosphate metabolic process	1.59E-04
9	GO:0052541: plant-type cell wall cellulose metabolic process	1.59E-04
10	GO:0042545: cell wall modification	2.48E-04
11	GO:0015840: urea transport	2.69E-04
12	GO:0006000: fructose metabolic process	2.69E-04
13	GO:0019722: calcium-mediated signaling	2.92E-04
14	GO:0006168: adenine salvage	3.90E-04
15	GO:0006166: purine ribonucleoside salvage	3.90E-04
16	GO:0080170: hydrogen peroxide transmembrane transport	3.90E-04
17	GO:0051016: barbed-end actin filament capping	3.90E-04
18	GO:0071554: cell wall organization or biogenesis	4.56E-04
19	GO:0010583: response to cyclopentenone	4.86E-04
20	GO:2000122: negative regulation of stomatal complex development	5.20E-04
21	GO:0010037: response to carbon dioxide	5.20E-04
22	GO:0015976: carbon utilization	5.20E-04
23	GO:0009765: photosynthesis, light harvesting	5.20E-04
24	GO:0006085: acetyl-CoA biosynthetic process	5.20E-04
25	GO:0007267: cell-cell signaling	5.82E-04
26	GO:0016123: xanthophyll biosynthetic process	6.60E-04
27	GO:0044209: AMP salvage	6.60E-04
28	GO:0032876: negative regulation of DNA endoreduplication	6.60E-04
29	GO:0016120: carotene biosynthetic process	6.60E-04
30	GO:0010405: arabinogalactan protein metabolic process	8.06E-04
31	GO:0018258: protein O-linked glycosylation via hydroxyproline	8.06E-04
32	GO:0005975: carbohydrate metabolic process	8.24E-04
33	GO:0045926: negative regulation of growth	9.59E-04
34	GO:0017148: negative regulation of translation	9.59E-04
35	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	9.59E-04
36	GO:0016051: carbohydrate biosynthetic process	1.05E-03
37	GO:0006402: mRNA catabolic process	1.29E-03
38	GO:0045010: actin nucleation	1.29E-03
39	GO:0007155: cell adhesion	1.29E-03
40	GO:0007389: pattern specification process	1.47E-03
41	GO:0006002: fructose 6-phosphate metabolic process	1.47E-03
42	GO:0006754: ATP biosynthetic process	1.65E-03
43	GO:0009870: defense response signaling pathway, resistance gene-dependent	2.05E-03
44	GO:0009773: photosynthetic electron transport in photosystem I	2.26E-03
45	GO:0006790: sulfur compound metabolic process	2.48E-03
46	GO:0009742: brassinosteroid mediated signaling pathway	2.68E-03
47	GO:2000028: regulation of photoperiodism, flowering	2.70E-03
48	GO:0030036: actin cytoskeleton organization	2.70E-03
49	GO:0050826: response to freezing	2.70E-03
50	GO:0006094: gluconeogenesis	2.70E-03
51	GO:0005986: sucrose biosynthetic process	2.70E-03
52	GO:0019253: reductive pentose-phosphate cycle	2.93E-03
53	GO:0046854: phosphatidylinositol phosphorylation	3.16E-03
54	GO:0009825: multidimensional cell growth	3.16E-03
55	GO:0005985: sucrose metabolic process	3.16E-03
56	GO:0006071: glycerol metabolic process	3.40E-03
57	GO:0010026: trichome differentiation	3.90E-03
58	GO:0009294: DNA mediated transformation	4.70E-03
59	GO:0009617: response to bacterium	5.17E-03
60	GO:0016117: carotenoid biosynthetic process	5.26E-03
61	GO:0055085: transmembrane transport	5.34E-03
62	GO:0000271: polysaccharide biosynthetic process	5.55E-03
63	GO:0080022: primary root development	5.55E-03
64	GO:0010051: xylem and phloem pattern formation	5.55E-03
65	GO:0009741: response to brassinosteroid	5.85E-03
66	GO:0045489: pectin biosynthetic process	5.85E-03
67	GO:0019252: starch biosynthetic process	6.45E-03
68	GO:1901657: glycosyl compound metabolic process	7.40E-03
69	GO:0016126: sterol biosynthetic process	8.74E-03
70	GO:0009414: response to water deprivation	9.37E-03
71	GO:0071555: cell wall organization	9.67E-03
72	GO:0010411: xyloglucan metabolic process	9.79E-03
73	GO:0000160: phosphorelay signal transduction system	1.09E-02
74	GO:0010119: regulation of stomatal movement	1.17E-02
75	GO:0006629: lipid metabolic process	1.23E-02
76	GO:0006839: mitochondrial transport	1.36E-02
77	GO:0042546: cell wall biogenesis	1.53E-02
78	GO:0009736: cytokinin-activated signaling pathway	1.84E-02
79	GO:0051603: proteolysis involved in cellular protein catabolic process	1.88E-02
80	GO:0009738: abscisic acid-activated signaling pathway	2.11E-02
81	GO:0048367: shoot system development	2.12E-02
82	GO:0009626: plant-type hypersensitive response	2.17E-02
83	GO:0009740: gibberellic acid mediated signaling pathway	2.26E-02
84	GO:0018105: peptidyl-serine phosphorylation	2.41E-02
85	GO:0051726: regulation of cell cycle	2.46E-02
86	GO:0007623: circadian rhythm	3.49E-02
87	GO:0007166: cell surface receptor signaling pathway	3.83E-02

Rank	GO Term	Adjusted P value
1	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
2	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
3	GO:0015250: water channel activity	3.24E-05
4	GO:0010313: phytochrome binding	6.58E-05
5	GO:0030797: 24-methylenesterol C-methyltransferase activity	6.58E-05
6	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	6.58E-05
7	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.59E-04
8	GO:0045330: aspartyl esterase activity	1.84E-04
9	GO:0030599: pectinesterase activity	2.38E-04
10	GO:0003999: adenine phosphoribosyltransferase activity	3.90E-04
11	GO:0003878: ATP citrate synthase activity	3.90E-04
12	GO:0048027: mRNA 5'-UTR binding	3.90E-04
13	GO:0015204: urea transmembrane transporter activity	5.20E-04
14	GO:0016413: O-acetyltransferase activity	6.17E-04
15	GO:1990714: hydroxyproline O-galactosyltransferase activity	8.06E-04
16	GO:0042578: phosphoric ester hydrolase activity	8.06E-04
17	GO:0051753: mannan synthase activity	9.59E-04
18	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	9.59E-04
19	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	9.59E-04
20	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.04E-03
21	GO:0004564: beta-fructofuranosidase activity	1.29E-03
22	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.65E-03
23	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.65E-03
24	GO:0004575: sucrose alpha-glucosidase activity	1.85E-03
25	GO:0004650: polygalacturonase activity	2.31E-03
26	GO:0004089: carbonate dehydratase activity	2.70E-03
27	GO:0016758: transferase activity, transferring hexosyl groups	3.07E-03
28	GO:0004857: enzyme inhibitor activity	3.65E-03
29	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	4.43E-03
30	GO:0030570: pectate lyase activity	4.70E-03
31	GO:0019901: protein kinase binding	6.45E-03
32	GO:0016762: xyloglucan:xyloglucosyl transferase activity	6.76E-03
33	GO:0004518: nuclease activity	7.08E-03
34	GO:0000156: phosphorelay response regulator activity	7.40E-03
35	GO:0051015: actin filament binding	7.40E-03
36	GO:0009931: calcium-dependent protein serine/threonine kinase activity	9.44E-03
37	GO:0004683: calmodulin-dependent protein kinase activity	9.79E-03
38	GO:0016798: hydrolase activity, acting on glycosyl bonds	9.79E-03
39	GO:0102483: scopolin beta-glucosidase activity	9.79E-03
40	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.02E-02
41	GO:0004871: signal transducer activity	1.04E-02
42	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.13E-02
43	GO:0008422: beta-glucosidase activity	1.32E-02
44	GO:0004185: serine-type carboxypeptidase activity	1.49E-02
45	GO:0045735: nutrient reservoir activity	2.07E-02
46	GO:0022857: transmembrane transporter activity	2.26E-02
47	GO:0003779: actin binding	2.31E-02
48	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.82E-02
49	GO:0016829: lyase activity	2.93E-02
50	GO:0030246: carbohydrate binding	2.94E-02
51	GO:0005516: calmodulin binding	3.29E-02
52	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.32E-02
53	GO:0046872: metal ion binding	3.51E-02
54	GO:0016757: transferase activity, transferring glycosyl groups	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0031225: anchored component of membrane	2.99E-05
2	GO:0046658: anchored component of plasma membrane	7.60E-05
3	GO:0000139: Golgi membrane	1.22E-04
4	GO:0005576: extracellular region	1.44E-04
5	GO:0005775: vacuolar lumen	3.90E-04
6	GO:0009346: citrate lyase complex	3.90E-04
7	GO:0009505: plant-type cell wall	5.89E-04
8	GO:0048046: apoplast	9.80E-04
9	GO:0042807: central vacuole	1.12E-03
10	GO:0005618: cell wall	1.16E-03
11	GO:0000326: protein storage vacuole	1.47E-03
12	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.65E-03
13	GO:0048471: perinuclear region of cytoplasm	2.26E-03
14	GO:0005794: Golgi apparatus	2.75E-03
15	GO:0005887: integral component of plasma membrane	2.81E-03
16	GO:0030529: intracellular ribonucleoprotein complex	8.74E-03
17	GO:0000325: plant-type vacuole	1.17E-02
18	GO:0009506: plasmodesma	1.23E-02
19	GO:0031902: late endosome membrane	1.40E-02
20	GO:0016020: membrane	1.47E-02
21	GO:0005886: plasma membrane	1.89E-02
22	GO:0016021: integral component of membrane	1.93E-02
23	GO:0009941: chloroplast envelope	2.06E-02
24	GO:0009705: plant-type vacuole membrane	3.49E-02
25	GO:0005802: trans-Golgi network	3.50E-02
26	GO:0005615: extracellular space	3.78E-02
27	GO:0005768: endosome	3.97E-02
28	GO:0005774: vacuolar membrane	4.58E-02