GO Enrichment Analysis of Co-expressed Genes with
AT1G77090
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000505: regulation of energy homeostasis | 0.00E+00 |
| 2 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 3 | GO:0009773: photosynthetic electron transport in photosystem I | 3.82E-10 |
| 4 | GO:0015979: photosynthesis | 1.29E-05 |
| 5 | GO:0009306: protein secretion | 3.92E-05 |
| 6 | GO:0010444: guard mother cell differentiation | 6.86E-05 |
| 7 | GO:1902458: positive regulation of stomatal opening | 1.33E-04 |
| 8 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.33E-04 |
| 9 | GO:1904964: positive regulation of phytol biosynthetic process | 1.33E-04 |
| 10 | GO:0043686: co-translational protein modification | 1.33E-04 |
| 11 | GO:0010027: thylakoid membrane organization | 1.36E-04 |
| 12 | GO:0015995: chlorophyll biosynthetic process | 1.71E-04 |
| 13 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.64E-04 |
| 14 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.07E-04 |
| 15 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.07E-04 |
| 16 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.07E-04 |
| 17 | GO:0035304: regulation of protein dephosphorylation | 3.07E-04 |
| 18 | GO:0010115: regulation of abscisic acid biosynthetic process | 3.07E-04 |
| 19 | GO:0010207: photosystem II assembly | 3.42E-04 |
| 20 | GO:0090391: granum assembly | 5.06E-04 |
| 21 | GO:0010623: programmed cell death involved in cell development | 5.06E-04 |
| 22 | GO:0009735: response to cytokinin | 5.32E-04 |
| 23 | GO:0009765: photosynthesis, light harvesting | 9.59E-04 |
| 24 | GO:0045727: positive regulation of translation | 9.59E-04 |
| 25 | GO:0015994: chlorophyll metabolic process | 9.59E-04 |
| 26 | GO:0031365: N-terminal protein amino acid modification | 1.21E-03 |
| 27 | GO:0080110: sporopollenin biosynthetic process | 1.21E-03 |
| 28 | GO:0009697: salicylic acid biosynthetic process | 1.21E-03 |
| 29 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.21E-03 |
| 30 | GO:0042549: photosystem II stabilization | 1.49E-03 |
| 31 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.49E-03 |
| 32 | GO:0006561: proline biosynthetic process | 1.49E-03 |
| 33 | GO:0042372: phylloquinone biosynthetic process | 1.78E-03 |
| 34 | GO:0009395: phospholipid catabolic process | 2.09E-03 |
| 35 | GO:0009772: photosynthetic electron transport in photosystem II | 2.09E-03 |
| 36 | GO:0010196: nonphotochemical quenching | 2.09E-03 |
| 37 | GO:1900057: positive regulation of leaf senescence | 2.09E-03 |
| 38 | GO:0006400: tRNA modification | 2.09E-03 |
| 39 | GO:0010492: maintenance of shoot apical meristem identity | 2.42E-03 |
| 40 | GO:0006605: protein targeting | 2.42E-03 |
| 41 | GO:2000070: regulation of response to water deprivation | 2.42E-03 |
| 42 | GO:0032544: plastid translation | 2.77E-03 |
| 43 | GO:0048507: meristem development | 3.13E-03 |
| 44 | GO:0010206: photosystem II repair | 3.13E-03 |
| 45 | GO:0010205: photoinhibition | 3.50E-03 |
| 46 | GO:0009688: abscisic acid biosynthetic process | 3.89E-03 |
| 47 | GO:0046856: phosphatidylinositol dephosphorylation | 4.30E-03 |
| 48 | GO:0019684: photosynthesis, light reaction | 4.30E-03 |
| 49 | GO:0009750: response to fructose | 4.30E-03 |
| 50 | GO:0006364: rRNA processing | 4.56E-03 |
| 51 | GO:0050826: response to freezing | 5.15E-03 |
| 52 | GO:0009767: photosynthetic electron transport chain | 5.15E-03 |
| 53 | GO:0010628: positive regulation of gene expression | 5.15E-03 |
| 54 | GO:0010143: cutin biosynthetic process | 5.60E-03 |
| 55 | GO:0090351: seedling development | 6.06E-03 |
| 56 | GO:0016042: lipid catabolic process | 6.18E-03 |
| 57 | GO:0010025: wax biosynthetic process | 6.53E-03 |
| 58 | GO:2000377: regulation of reactive oxygen species metabolic process | 7.01E-03 |
| 59 | GO:0008152: metabolic process | 7.26E-03 |
| 60 | GO:0019953: sexual reproduction | 7.51E-03 |
| 61 | GO:0007017: microtubule-based process | 7.51E-03 |
| 62 | GO:0010017: red or far-red light signaling pathway | 8.55E-03 |
| 63 | GO:0010584: pollen exine formation | 9.63E-03 |
| 64 | GO:0042127: regulation of cell proliferation | 9.63E-03 |
| 65 | GO:0000413: protein peptidyl-prolyl isomerization | 1.08E-02 |
| 66 | GO:0010182: sugar mediated signaling pathway | 1.13E-02 |
| 67 | GO:0071472: cellular response to salt stress | 1.13E-02 |
| 68 | GO:0010305: leaf vascular tissue pattern formation | 1.13E-02 |
| 69 | GO:0042752: regulation of circadian rhythm | 1.19E-02 |
| 70 | GO:0048544: recognition of pollen | 1.19E-02 |
| 71 | GO:0015986: ATP synthesis coupled proton transport | 1.19E-02 |
| 72 | GO:0016032: viral process | 1.38E-02 |
| 73 | GO:0005975: carbohydrate metabolic process | 1.60E-02 |
| 74 | GO:0018298: protein-chromophore linkage | 2.06E-02 |
| 75 | GO:0000160: phosphorelay signal transduction system | 2.14E-02 |
| 76 | GO:0006865: amino acid transport | 2.36E-02 |
| 77 | GO:0010114: response to red light | 2.92E-02 |
| 78 | GO:0006629: lipid metabolic process | 3.19E-02 |
| 79 | GO:0009736: cytokinin-activated signaling pathway | 3.62E-02 |
| 80 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.71E-02 |
| 81 | GO:0048316: seed development | 4.17E-02 |
| 82 | GO:0009409: response to cold | 4.68E-02 |
| 83 | GO:0051726: regulation of cell cycle | 4.84E-02 |
| 84 | GO:0009742: brassinosteroid mediated signaling pathway | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 3 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 4 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 5 | GO:0005528: FK506 binding | 1.85E-05 |
| 6 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.74E-05 |
| 7 | GO:0010242: oxygen evolving activity | 1.33E-04 |
| 8 | GO:0042586: peptide deformylase activity | 1.33E-04 |
| 9 | GO:0008909: isochorismate synthase activity | 1.33E-04 |
| 10 | GO:0047746: chlorophyllase activity | 3.07E-04 |
| 11 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 3.07E-04 |
| 12 | GO:0016630: protochlorophyllide reductase activity | 3.07E-04 |
| 13 | GO:0008266: poly(U) RNA binding | 3.42E-04 |
| 14 | GO:0016851: magnesium chelatase activity | 7.24E-04 |
| 15 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 7.24E-04 |
| 16 | GO:0016746: transferase activity, transferring acyl groups | 9.02E-04 |
| 17 | GO:0043495: protein anchor | 9.59E-04 |
| 18 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 9.59E-04 |
| 19 | GO:0050662: coenzyme binding | 9.89E-04 |
| 20 | GO:0003959: NADPH dehydrogenase activity | 1.21E-03 |
| 21 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.49E-03 |
| 22 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.49E-03 |
| 23 | GO:0042578: phosphoric ester hydrolase activity | 1.49E-03 |
| 24 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 1.49E-03 |
| 25 | GO:0016597: amino acid binding | 1.52E-03 |
| 26 | GO:0016168: chlorophyll binding | 1.70E-03 |
| 27 | GO:0004017: adenylate kinase activity | 1.78E-03 |
| 28 | GO:0019899: enzyme binding | 2.09E-03 |
| 29 | GO:0043022: ribosome binding | 2.42E-03 |
| 30 | GO:0016788: hydrolase activity, acting on ester bonds | 3.05E-03 |
| 31 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 3.13E-03 |
| 32 | GO:0016491: oxidoreductase activity | 3.46E-03 |
| 33 | GO:0047372: acylglycerol lipase activity | 4.30E-03 |
| 34 | GO:0052689: carboxylic ester hydrolase activity | 4.44E-03 |
| 35 | GO:0030246: carbohydrate binding | 4.59E-03 |
| 36 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 4.72E-03 |
| 37 | GO:0031072: heat shock protein binding | 5.15E-03 |
| 38 | GO:0004565: beta-galactosidase activity | 5.15E-03 |
| 39 | GO:0004022: alcohol dehydrogenase (NAD) activity | 5.15E-03 |
| 40 | GO:0043424: protein histidine kinase binding | 7.51E-03 |
| 41 | GO:0004176: ATP-dependent peptidase activity | 8.02E-03 |
| 42 | GO:0016787: hydrolase activity | 8.10E-03 |
| 43 | GO:0022891: substrate-specific transmembrane transporter activity | 9.08E-03 |
| 44 | GO:0003756: protein disulfide isomerase activity | 9.63E-03 |
| 45 | GO:0003824: catalytic activity | 9.82E-03 |
| 46 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.13E-02 |
| 47 | GO:0048038: quinone binding | 1.32E-02 |
| 48 | GO:0004197: cysteine-type endopeptidase activity | 1.38E-02 |
| 49 | GO:0042802: identical protein binding | 1.43E-02 |
| 50 | GO:0000156: phosphorelay response regulator activity | 1.44E-02 |
| 51 | GO:0016791: phosphatase activity | 1.51E-02 |
| 52 | GO:0005200: structural constituent of cytoskeleton | 1.57E-02 |
| 53 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.06E-02 |
| 54 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.21E-02 |
| 55 | GO:0003746: translation elongation factor activity | 2.44E-02 |
| 56 | GO:0003993: acid phosphatase activity | 2.52E-02 |
| 57 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.68E-02 |
| 58 | GO:0009055: electron carrier activity | 3.42E-02 |
| 59 | GO:0016298: lipase activity | 3.71E-02 |
| 60 | GO:0015171: amino acid transmembrane transporter activity | 3.89E-02 |
| 61 | GO:0008234: cysteine-type peptidase activity | 3.89E-02 |
| 62 | GO:0016874: ligase activity | 4.45E-02 |
| 63 | GO:0051082: unfolded protein binding | 4.65E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009535: chloroplast thylakoid membrane | 6.95E-28 |
| 2 | GO:0009507: chloroplast | 1.62E-24 |
| 3 | GO:0009534: chloroplast thylakoid | 1.70E-22 |
| 4 | GO:0009579: thylakoid | 1.98E-12 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 1.33E-11 |
| 6 | GO:0009570: chloroplast stroma | 5.96E-08 |
| 7 | GO:0009941: chloroplast envelope | 5.97E-08 |
| 8 | GO:0031977: thylakoid lumen | 8.65E-07 |
| 9 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.21E-06 |
| 10 | GO:0033281: TAT protein transport complex | 3.35E-06 |
| 11 | GO:0010287: plastoglobule | 1.30E-04 |
| 12 | GO:0009515: granal stacked thylakoid | 1.33E-04 |
| 13 | GO:0030093: chloroplast photosystem I | 3.07E-04 |
| 14 | GO:0030095: chloroplast photosystem II | 3.42E-04 |
| 15 | GO:0010007: magnesium chelatase complex | 5.06E-04 |
| 16 | GO:0015630: microtubule cytoskeleton | 7.24E-04 |
| 17 | GO:0016021: integral component of membrane | 1.04E-03 |
| 18 | GO:0009523: photosystem II | 1.06E-03 |
| 19 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.49E-03 |
| 20 | GO:0009533: chloroplast stromal thylakoid | 2.09E-03 |
| 21 | GO:0008180: COP9 signalosome | 3.13E-03 |
| 22 | GO:0031969: chloroplast membrane | 3.91E-03 |
| 23 | GO:0005578: proteinaceous extracellular matrix | 5.15E-03 |
| 24 | GO:0009508: plastid chromosome | 5.15E-03 |
| 25 | GO:0005764: lysosome | 5.60E-03 |
| 26 | GO:0009654: photosystem II oxygen evolving complex | 7.51E-03 |
| 27 | GO:0042651: thylakoid membrane | 7.51E-03 |
| 28 | GO:0009522: photosystem I | 1.19E-02 |
| 29 | GO:0019898: extrinsic component of membrane | 1.25E-02 |
| 30 | GO:0010319: stromule | 1.57E-02 |
| 31 | GO:0009295: nucleoid | 1.57E-02 |
| 32 | GO:0019005: SCF ubiquitin ligase complex | 2.06E-02 |
| 33 | GO:0000325: plant-type vacuole | 2.29E-02 |
| 34 | GO:0005618: cell wall | 2.33E-02 |
| 35 | GO:0000502: proteasome complex | 3.62E-02 |
| 36 | GO:0009505: plant-type cell wall | 4.26E-02 |