co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G76520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032497: detection of lipopolysaccharide	0.00E+00
2	GO:0019484: beta-alanine catabolic process	0.00E+00
3	GO:0010398: xylogalacturonan metabolic process	0.00E+00
4	GO:0045185: maintenance of protein location	0.00E+00
5	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
6	GO:0006105: succinate metabolic process	0.00E+00
7	GO:0048544: recognition of pollen	1.33E-05
8	GO:0008202: steroid metabolic process	5.55E-05
9	GO:0009865: pollen tube adhesion	6.42E-05
10	GO:0006540: glutamate decarboxylation to succinate	6.42E-05
11	GO:0035266: meristem growth	6.42E-05
12	GO:0009450: gamma-aminobutyric acid catabolic process	6.42E-05
13	GO:0007292: female gamete generation	6.42E-05
14	GO:0015865: purine nucleotide transport	1.55E-04
15	GO:1902000: homogentisate catabolic process	1.55E-04
16	GO:0019441: tryptophan catabolic process to kynurenine	1.55E-04
17	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	1.55E-04
18	GO:0010033: response to organic substance	1.55E-04
19	GO:0051788: response to misfolded protein	1.55E-04
20	GO:0046686: response to cadmium ion	1.56E-04
21	GO:0031408: oxylipin biosynthetic process	2.16E-04
22	GO:0071215: cellular response to abscisic acid stimulus	2.59E-04
23	GO:0009072: aromatic amino acid family metabolic process	2.63E-04
24	GO:0060968: regulation of gene silencing	2.63E-04
25	GO:0009113: purine nucleobase biosynthetic process	3.82E-04
26	GO:0001676: long-chain fatty acid metabolic process	3.82E-04
27	GO:0006572: tyrosine catabolic process	3.82E-04
28	GO:0019438: aromatic compound biosynthetic process	3.82E-04
29	GO:0006624: vacuolar protein processing	3.82E-04
30	GO:0006020: inositol metabolic process	3.82E-04
31	GO:0046902: regulation of mitochondrial membrane permeability	3.82E-04
32	GO:0010150: leaf senescence	5.04E-04
33	GO:0010222: stem vascular tissue pattern formation	5.10E-04
34	GO:1902584: positive regulation of response to water deprivation	5.10E-04
35	GO:0006536: glutamate metabolic process	5.10E-04
36	GO:0006014: D-ribose metabolic process	7.90E-04
37	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	7.90E-04
38	GO:0048827: phyllome development	7.90E-04
39	GO:0048232: male gamete generation	7.90E-04
40	GO:0043248: proteasome assembly	7.90E-04
41	GO:0008219: cell death	8.14E-04
42	GO:0006499: N-terminal protein myristoylation	8.94E-04
43	GO:0006694: steroid biosynthetic process	9.40E-04
44	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	9.40E-04
45	GO:0045087: innate immune response	1.02E-03
46	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.10E-03
47	GO:0071669: plant-type cell wall organization or biogenesis	1.10E-03
48	GO:0009396: folic acid-containing compound biosynthetic process	1.10E-03
49	GO:0006605: protein targeting	1.26E-03
50	GO:0010078: maintenance of root meristem identity	1.26E-03
51	GO:0016559: peroxisome fission	1.26E-03
52	GO:0035999: tetrahydrofolate interconversion	1.81E-03
53	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.81E-03
54	GO:0048364: root development	1.94E-03
55	GO:0043069: negative regulation of programmed cell death	2.01E-03
56	GO:0048829: root cap development	2.01E-03
57	GO:0007064: mitotic sister chromatid cohesion	2.01E-03
58	GO:0048367: shoot system development	2.11E-03
59	GO:0009626: plant-type hypersensitive response	2.17E-03
60	GO:0006378: mRNA polyadenylation	2.21E-03
61	GO:0010015: root morphogenesis	2.21E-03
62	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	2.42E-03
63	GO:0071365: cellular response to auxin stimulus	2.42E-03
64	GO:0000266: mitochondrial fission	2.42E-03
65	GO:0006541: glutamine metabolic process	2.87E-03
66	GO:0009933: meristem structural organization	2.87E-03
67	GO:0090351: seedling development	3.09E-03
68	GO:0007031: peroxisome organization	3.09E-03
69	GO:0010167: response to nitrate	3.09E-03
70	GO:0005985: sucrose metabolic process	3.09E-03
71	GO:0000162: tryptophan biosynthetic process	3.33E-03
72	GO:0030433: ubiquitin-dependent ERAD pathway	4.34E-03
73	GO:0071456: cellular response to hypoxia	4.34E-03
74	GO:0007166: cell surface receptor signaling pathway	4.80E-03
75	GO:0000271: polysaccharide biosynthetic process	5.43E-03
76	GO:0010051: xylem and phloem pattern formation	5.43E-03
77	GO:0042631: cellular response to water deprivation	5.43E-03
78	GO:0045489: pectin biosynthetic process	5.72E-03
79	GO:0010154: fruit development	5.72E-03
80	GO:0009749: response to glucose	6.31E-03
81	GO:0019252: starch biosynthetic process	6.31E-03
82	GO:0010183: pollen tube guidance	6.31E-03
83	GO:0006635: fatty acid beta-oxidation	6.61E-03
84	GO:0007264: small GTPase mediated signal transduction	6.92E-03
85	GO:0006464: cellular protein modification process	7.55E-03
86	GO:0071805: potassium ion transmembrane transport	7.88E-03
87	GO:0080167: response to karrikin	8.04E-03
88	GO:0051607: defense response to virus	8.21E-03
89	GO:0016126: sterol biosynthetic process	8.54E-03
90	GO:0046777: protein autophosphorylation	8.59E-03
91	GO:0055114: oxidation-reduction process	8.95E-03
92	GO:0006979: response to oxidative stress	9.36E-03
93	GO:0048573: photoperiodism, flowering	9.57E-03
94	GO:0030244: cellulose biosynthetic process	1.03E-02
95	GO:0006869: lipid transport	1.06E-02
96	GO:0009832: plant-type cell wall biogenesis	1.07E-02
97	GO:0048767: root hair elongation	1.07E-02
98	GO:0010311: lateral root formation	1.07E-02
99	GO:0006468: protein phosphorylation	1.33E-02
100	GO:0006839: mitochondrial transport	1.33E-02
101	GO:0006631: fatty acid metabolic process	1.37E-02
102	GO:0051707: response to other organism	1.45E-02
103	GO:0009965: leaf morphogenesis	1.58E-02
104	GO:0006813: potassium ion transport	1.80E-02
105	GO:0051603: proteolysis involved in cellular protein catabolic process	1.84E-02
106	GO:0009620: response to fungus	2.16E-02
107	GO:0009611: response to wounding	2.16E-02
108	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.69E-02
109	GO:0006470: protein dephosphorylation	3.75E-02
110	GO:0006508: proteolysis	3.80E-02
111	GO:0010468: regulation of gene expression	3.86E-02
112	GO:0071555: cell wall organization	4.27E-02
113	GO:0042742: defense response to bacterium	4.27E-02
114	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	4.40E-02
115	GO:0009860: pollen tube growth	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
2	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
3	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
4	GO:0004334: fumarylacetoacetase activity	0.00E+00
5	GO:0035671: enone reductase activity	6.42E-05
6	GO:0003867: 4-aminobutyrate transaminase activity	6.42E-05
7	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	1.55E-04
8	GO:0004061: arylformamidase activity	1.55E-04
9	GO:0004329: formate-tetrahydrofolate ligase activity	1.55E-04
10	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	1.55E-04
11	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	1.55E-04
12	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	1.55E-04
13	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	2.63E-04
14	GO:0005047: signal recognition particle binding	2.63E-04
15	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	2.63E-04
16	GO:0004300: enoyl-CoA hydratase activity	3.82E-04
17	GO:0016004: phospholipase activator activity	5.10E-04
18	GO:0004834: tryptophan synthase activity	5.10E-04
19	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	5.10E-04
20	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	6.45E-04
21	GO:0005471: ATP:ADP antiporter activity	6.45E-04
22	GO:0016301: kinase activity	7.16E-04
23	GO:0030247: polysaccharide binding	7.39E-04
24	GO:0004029: aldehyde dehydrogenase (NAD) activity	7.90E-04
25	GO:0035252: UDP-xylosyltransferase activity	7.90E-04
26	GO:0036402: proteasome-activating ATPase activity	7.90E-04
27	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	9.40E-04
28	GO:0004747: ribokinase activity	9.40E-04
29	GO:0051753: mannan synthase activity	9.40E-04
30	GO:0004620: phospholipase activity	1.10E-03
31	GO:0008865: fructokinase activity	1.26E-03
32	GO:0008142: oxysterol binding	1.44E-03
33	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.62E-03
34	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.62E-03
35	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.81E-03
36	GO:0031625: ubiquitin protein ligase binding	1.92E-03
37	GO:0008171: O-methyltransferase activity	2.01E-03
38	GO:0047372: acylglycerol lipase activity	2.21E-03
39	GO:0008794: arsenate reductase (glutaredoxin) activity	2.21E-03
40	GO:0004175: endopeptidase activity	2.87E-03
41	GO:0017025: TBP-class protein binding	3.09E-03
42	GO:0004725: protein tyrosine phosphatase activity	3.33E-03
43	GO:0005524: ATP binding	3.44E-03
44	GO:0015079: potassium ion transmembrane transporter activity	3.82E-03
45	GO:0043424: protein histidine kinase binding	3.82E-03
46	GO:0016760: cellulose synthase (UDP-forming) activity	4.60E-03
47	GO:0030246: carbohydrate binding	5.52E-03
48	GO:0010181: FMN binding	6.01E-03
49	GO:0004197: cysteine-type endopeptidase activity	6.92E-03
50	GO:0005525: GTP binding	7.12E-03
51	GO:0016759: cellulose synthase activity	7.55E-03
52	GO:0051213: dioxygenase activity	8.54E-03
53	GO:0008236: serine-type peptidase activity	9.93E-03
54	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	9.93E-03
55	GO:0050897: cobalt ion binding	1.14E-02
56	GO:0003924: GTPase activity	1.19E-02
57	GO:0016298: lipase activity	1.84E-02
58	GO:0008234: cysteine-type peptidase activity	1.93E-02
59	GO:0045735: nutrient reservoir activity	2.02E-02
60	GO:0004674: protein serine/threonine kinase activity	2.10E-02
61	GO:0015035: protein disulfide oxidoreductase activity	2.36E-02
62	GO:0030170: pyridoxal phosphate binding	2.92E-02
63	GO:0005516: calmodulin binding	3.18E-02
64	GO:0008017: microtubule binding	3.52E-02
65	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.04E-02
66	GO:0042802: identical protein binding	4.04E-02
67	GO:0004601: peroxidase activity	4.65E-02
68	GO:0003824: catalytic activity	4.68E-02
69	GO:0003682: chromatin binding	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0000323: lytic vacuole	2.19E-06
3	GO:0005849: mRNA cleavage factor complex	3.82E-04
4	GO:0005886: plasma membrane	4.02E-04
5	GO:0031597: cytosolic proteasome complex	9.40E-04
6	GO:0030173: integral component of Golgi membrane	9.40E-04
7	GO:0031595: nuclear proteasome complex	1.10E-03
8	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.44E-03
9	GO:0005779: integral component of peroxisomal membrane	1.44E-03
10	GO:0008540: proteasome regulatory particle, base subcomplex	1.81E-03
11	GO:0005773: vacuole	1.93E-03
12	GO:0016021: integral component of membrane	2.26E-03
13	GO:0005794: Golgi apparatus	2.54E-03
14	GO:0005802: trans-Golgi network	6.88E-03
15	GO:0005778: peroxisomal membrane	7.88E-03
16	GO:0005768: endosome	8.11E-03
17	GO:0009506: plasmodesma	1.16E-02
18	GO:0005774: vacuolar membrane	1.24E-02
19	GO:0000502: proteasome complex	1.80E-02
20	GO:0005777: peroxisome	2.43E-02
21	GO:0009524: phragmoplast	2.81E-02
22	GO:0005759: mitochondrial matrix	3.19E-02
23	GO:0005829: cytosol	3.88E-02