co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G76360

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006105: succinate metabolic process	0.00E+00
2	GO:0045022: early endosome to late endosome transport	0.00E+00
3	GO:0044249: cellular biosynthetic process	0.00E+00
4	GO:0019484: beta-alanine catabolic process	0.00E+00
5	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
6	GO:0046459: short-chain fatty acid metabolic process	0.00E+00
7	GO:0070291: N-acylethanolamine metabolic process	0.00E+00
8	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
9	GO:0006014: D-ribose metabolic process	1.05E-04
10	GO:0010150: leaf senescence	1.74E-04
11	GO:0016559: peroxisome fission	2.41E-04
12	GO:1990641: response to iron ion starvation	2.57E-04
13	GO:1903409: reactive oxygen species biosynthetic process	2.57E-04
14	GO:1902265: abscisic acid homeostasis	2.57E-04
15	GO:0009865: pollen tube adhesion	2.57E-04
16	GO:0035344: hypoxanthine transport	2.57E-04
17	GO:0006540: glutamate decarboxylation to succinate	2.57E-04
18	GO:0035494: SNARE complex disassembly	2.57E-04
19	GO:0098721: uracil import across plasma membrane	2.57E-04
20	GO:0098702: adenine import across plasma membrane	2.57E-04
21	GO:0046167: glycerol-3-phosphate biosynthetic process	2.57E-04
22	GO:0098710: guanine import across plasma membrane	2.57E-04
23	GO:0009450: gamma-aminobutyric acid catabolic process	2.57E-04
24	GO:0006635: fatty acid beta-oxidation	2.91E-04
25	GO:0010286: heat acclimation	4.07E-04
26	GO:0008202: steroid metabolic process	4.27E-04
27	GO:0006641: triglyceride metabolic process	5.68E-04
28	GO:0006101: citrate metabolic process	5.68E-04
29	GO:1900459: positive regulation of brassinosteroid mediated signaling pathway	5.68E-04
30	GO:1902000: homogentisate catabolic process	5.68E-04
31	GO:0030003: cellular cation homeostasis	5.68E-04
32	GO:0019441: tryptophan catabolic process to kynurenine	5.68E-04
33	GO:0010033: response to organic substance	5.68E-04
34	GO:0042344: indole glucosinolate catabolic process	9.22E-04
35	GO:0006954: inflammatory response	9.22E-04
36	GO:0019563: glycerol catabolic process	9.22E-04
37	GO:0046786: viral replication complex formation and maintenance	9.22E-04
38	GO:0030029: actin filament-based process	9.22E-04
39	GO:0009072: aromatic amino acid family metabolic process	9.22E-04
40	GO:0042742: defense response to bacterium	9.80E-04
41	GO:0006072: glycerol-3-phosphate metabolic process	1.32E-03
42	GO:0015749: monosaccharide transport	1.32E-03
43	GO:0009399: nitrogen fixation	1.32E-03
44	GO:1901332: negative regulation of lateral root development	1.32E-03
45	GO:0009963: positive regulation of flavonoid biosynthetic process	1.32E-03
46	GO:0006882: cellular zinc ion homeostasis	1.32E-03
47	GO:0006572: tyrosine catabolic process	1.32E-03
48	GO:0051259: protein oligomerization	1.32E-03
49	GO:0019438: aromatic compound biosynthetic process	1.32E-03
50	GO:0006624: vacuolar protein processing	1.32E-03
51	GO:0006020: inositol metabolic process	1.32E-03
52	GO:0071215: cellular response to abscisic acid stimulus	1.65E-03
53	GO:1902584: positive regulation of response to water deprivation	1.76E-03
54	GO:0006536: glutamate metabolic process	1.76E-03
55	GO:0042594: response to starvation	1.76E-03
56	GO:0010508: positive regulation of autophagy	1.76E-03
57	GO:0010188: response to microbial phytotoxin	1.76E-03
58	GO:0006878: cellular copper ion homeostasis	1.76E-03
59	GO:0006542: glutamine biosynthetic process	1.76E-03
60	GO:0006646: phosphatidylethanolamine biosynthetic process	1.76E-03
61	GO:0010222: stem vascular tissue pattern formation	1.76E-03
62	GO:0009687: abscisic acid metabolic process	1.76E-03
63	GO:0000290: deadenylation-dependent decapping of nuclear-transcribed mRNA	2.25E-03
64	GO:0043097: pyrimidine nucleoside salvage	2.25E-03
65	GO:0046323: glucose import	2.26E-03
66	GO:0019252: starch biosynthetic process	2.61E-03
67	GO:0042732: D-xylose metabolic process	2.77E-03
68	GO:0006206: pyrimidine nucleobase metabolic process	2.77E-03
69	GO:0000741: karyogamy	2.77E-03
70	GO:0016070: RNA metabolic process	2.77E-03
71	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	2.77E-03
72	GO:0016192: vesicle-mediated transport	3.03E-03
73	GO:0071281: cellular response to iron ion	3.18E-03
74	GO:0019509: L-methionine salvage from methylthioadenosine	3.33E-03
75	GO:0006694: steroid biosynthetic process	3.33E-03
76	GO:0048280: vesicle fusion with Golgi apparatus	3.33E-03
77	GO:0031930: mitochondria-nucleus signaling pathway	3.33E-03
78	GO:0070370: cellular heat acclimation	3.93E-03
79	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.93E-03
80	GO:0006333: chromatin assembly or disassembly	3.93E-03
81	GO:0010044: response to aluminum ion	3.93E-03
82	GO:0009395: phospholipid catabolic process	3.93E-03
83	GO:0001666: response to hypoxia	4.03E-03
84	GO:0009061: anaerobic respiration	4.56E-03
85	GO:0009819: drought recovery	4.56E-03
86	GO:0006605: protein targeting	4.56E-03
87	GO:0009415: response to water	4.56E-03
88	GO:0006491: N-glycan processing	4.56E-03
89	GO:0006102: isocitrate metabolic process	4.56E-03
90	GO:0006950: response to stress	4.74E-03
91	GO:0030968: endoplasmic reticulum unfolded protein response	5.22E-03
92	GO:0009808: lignin metabolic process	5.22E-03
93	GO:0008219: cell death	5.25E-03
94	GO:0006811: ion transport	5.79E-03
95	GO:0006098: pentose-phosphate shunt	5.92E-03
96	GO:0046916: cellular transition metal ion homeostasis	5.92E-03
97	GO:0009631: cold acclimation	6.07E-03
98	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.64E-03
99	GO:0006099: tricarboxylic acid cycle	6.96E-03
100	GO:0010468: regulation of gene expression	7.00E-03
101	GO:0007064: mitotic sister chromatid cohesion	7.40E-03
102	GO:0006896: Golgi to vacuole transport	7.40E-03
103	GO:0006535: cysteine biosynthetic process from serine	7.40E-03
104	GO:0009641: shade avoidance	7.40E-03
105	GO:0006897: endocytosis	7.91E-03
106	GO:0006816: calcium ion transport	8.19E-03
107	GO:0009682: induced systemic resistance	8.19E-03
108	GO:0052544: defense response by callose deposition in cell wall	8.19E-03
109	GO:0006378: mRNA polyadenylation	8.19E-03
110	GO:0000266: mitochondrial fission	9.00E-03
111	GO:0034605: cellular response to heat	1.07E-02
112	GO:0006541: glutamine metabolic process	1.07E-02
113	GO:0007034: vacuolar transport	1.07E-02
114	GO:0002237: response to molecule of bacterial origin	1.07E-02
115	GO:0007031: peroxisome organization	1.16E-02
116	GO:0010167: response to nitrate	1.16E-02
117	GO:0005985: sucrose metabolic process	1.16E-02
118	GO:0071732: cellular response to nitric oxide	1.16E-02
119	GO:0010030: positive regulation of seed germination	1.16E-02
120	GO:0051603: proteolysis involved in cellular protein catabolic process	1.20E-02
121	GO:0034976: response to endoplasmic reticulum stress	1.25E-02
122	GO:0045333: cellular respiration	1.35E-02
123	GO:2000377: regulation of reactive oxygen species metabolic process	1.35E-02
124	GO:0019344: cysteine biosynthetic process	1.35E-02
125	GO:0007165: signal transduction	1.40E-02
126	GO:0048367: shoot system development	1.42E-02
127	GO:0044550: secondary metabolite biosynthetic process	1.43E-02
128	GO:0016575: histone deacetylation	1.45E-02
129	GO:0006874: cellular calcium ion homeostasis	1.45E-02
130	GO:0009695: jasmonic acid biosynthetic process	1.45E-02
131	GO:0009626: plant-type hypersensitive response	1.46E-02
132	GO:0009269: response to desiccation	1.55E-02
133	GO:0031408: oxylipin biosynthetic process	1.55E-02
134	GO:0035428: hexose transmembrane transport	1.65E-02
135	GO:0007005: mitochondrion organization	1.65E-02
136	GO:0071456: cellular response to hypoxia	1.65E-02
137	GO:0006396: RNA processing	1.70E-02
138	GO:0009742: brassinosteroid mediated signaling pathway	1.76E-02
139	GO:0071369: cellular response to ethylene stimulus	1.76E-02
140	GO:0048443: stamen development	1.86E-02
141	GO:0009306: protein secretion	1.86E-02
142	GO:0042147: retrograde transport, endosome to Golgi	1.97E-02
143	GO:0042631: cellular response to water deprivation	2.09E-02
144	GO:0010051: xylem and phloem pattern formation	2.09E-02
145	GO:0015991: ATP hydrolysis coupled proton transport	2.09E-02
146	GO:0009960: endosperm development	2.20E-02
147	GO:0010154: fruit development	2.20E-02
148	GO:0010197: polar nucleus fusion	2.20E-02
149	GO:0010182: sugar mediated signaling pathway	2.20E-02
150	GO:0048364: root development	2.21E-02
151	GO:0006397: mRNA processing	2.21E-02
152	GO:0048544: recognition of pollen	2.32E-02
153	GO:0061025: membrane fusion	2.32E-02
154	GO:0006814: sodium ion transport	2.32E-02
155	GO:0006623: protein targeting to vacuole	2.43E-02
156	GO:0010183: pollen tube guidance	2.43E-02
157	GO:0009749: response to glucose	2.43E-02
158	GO:0008654: phospholipid biosynthetic process	2.43E-02
159	GO:0006891: intra-Golgi vesicle-mediated transport	2.56E-02
160	GO:0006633: fatty acid biosynthetic process	2.61E-02
161	GO:0010583: response to cyclopentenone	2.68E-02
162	GO:0009630: gravitropism	2.68E-02
163	GO:0019760: glucosinolate metabolic process	2.93E-02
164	GO:0010252: auxin homeostasis	2.93E-02
165	GO:0006914: autophagy	2.93E-02
166	GO:0006904: vesicle docking involved in exocytosis	3.06E-02
167	GO:0016579: protein deubiquitination	3.19E-02
168	GO:0051607: defense response to virus	3.19E-02
169	GO:0007166: cell surface receptor signaling pathway	3.27E-02
170	GO:0016126: sterol biosynthetic process	3.32E-02
171	GO:0006468: protein phosphorylation	3.38E-02
172	GO:0009617: response to bacterium	3.42E-02
173	GO:0009816: defense response to bacterium, incompatible interaction	3.46E-02
174	GO:0006979: response to oxidative stress	3.49E-02
175	GO:0042128: nitrate assimilation	3.59E-02
176	GO:0048573: photoperiodism, flowering	3.73E-02
177	GO:0006888: ER to Golgi vesicle-mediated transport	3.73E-02
178	GO:0009817: defense response to fungus, incompatible interaction	4.01E-02
179	GO:0006499: N-terminal protein myristoylation	4.30E-02
180	GO:0009611: response to wounding	4.39E-02
181	GO:0010043: response to zinc ion	4.45E-02
182	GO:0006865: amino acid transport	4.60E-02
183	GO:0045087: innate immune response	4.75E-02
184	GO:0016051: carbohydrate biosynthetic process	4.75E-02
185	GO:0016310: phosphorylation	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0047172: shikimate O-hydroxycinnamoyltransferase activity	0.00E+00
2	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
3	GO:0009045: xylose isomerase activity	0.00E+00
4	GO:0103073: anandamide amidohydrolase activity	0.00E+00
5	GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity	0.00E+00
6	GO:0102077: oleamide hydrolase activity	0.00E+00
7	GO:0004334: fumarylacetoacetase activity	0.00E+00
8	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
9	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
10	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
11	GO:0004370: glycerol kinase activity	0.00E+00
12	GO:0047412: N-(long-chain-acyl)ethanolamine deacylase activity	0.00E+00
13	GO:0005272: sodium channel activity	0.00E+00
14	GO:0047205: quinate O-hydroxycinnamoyltransferase activity	0.00E+00
15	GO:0004747: ribokinase activity	1.45E-04
16	GO:0004525: ribonuclease III activity	2.41E-04
17	GO:0008865: fructokinase activity	2.41E-04
18	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	2.57E-04
19	GO:0001530: lipopolysaccharide binding	2.57E-04
20	GO:0046870: cadmium ion binding	2.57E-04
21	GO:0015208: guanine transmembrane transporter activity	2.57E-04
22	GO:0004112: cyclic-nucleotide phosphodiesterase activity	2.57E-04
23	GO:0015294: solute:cation symporter activity	2.57E-04
24	GO:0003867: 4-aminobutyrate transaminase activity	2.57E-04
25	GO:0015207: adenine transmembrane transporter activity	2.57E-04
26	GO:0030544: Hsp70 protein binding	2.57E-04
27	GO:0019707: protein-cysteine S-acyltransferase activity	2.57E-04
28	GO:0009679: hexose:proton symporter activity	2.57E-04
29	GO:0035671: enone reductase activity	2.57E-04
30	GO:0016301: kinase activity	4.78E-04
31	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	5.68E-04
32	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	5.68E-04
33	GO:0004061: arylformamidase activity	5.68E-04
34	GO:0019200: carbohydrate kinase activity	5.68E-04
35	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	5.68E-04
36	GO:0047209: coniferyl-alcohol glucosyltransferase activity	5.68E-04
37	GO:0004566: beta-glucuronidase activity	5.68E-04
38	GO:0032791: lead ion binding	5.68E-04
39	GO:0004609: phosphatidylserine decarboxylase activity	5.68E-04
40	GO:0003994: aconitate hydratase activity	5.68E-04
41	GO:0005047: signal recognition particle binding	9.22E-04
42	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	9.22E-04
43	GO:0004383: guanylate cyclase activity	9.22E-04
44	GO:0005483: soluble NSF attachment protein activity	9.22E-04
45	GO:0004180: carboxypeptidase activity	9.22E-04
46	GO:0001653: peptide receptor activity	1.32E-03
47	GO:0048027: mRNA 5'-UTR binding	1.32E-03
48	GO:0004108: citrate (Si)-synthase activity	1.32E-03
49	GO:0030527: structural constituent of chromatin	1.32E-03
50	GO:0000339: RNA cap binding	1.32E-03
51	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.32E-03
52	GO:0004300: enoyl-CoA hydratase activity	1.32E-03
53	GO:0015210: uracil transmembrane transporter activity	1.76E-03
54	GO:0003995: acyl-CoA dehydrogenase activity	1.76E-03
55	GO:0009916: alternative oxidase activity	1.76E-03
56	GO:0004737: pyruvate decarboxylase activity	1.76E-03
57	GO:0019905: syntaxin binding	1.76E-03
58	GO:0015145: monosaccharide transmembrane transporter activity	2.25E-03
59	GO:0004040: amidase activity	2.25E-03
60	GO:0003997: acyl-CoA oxidase activity	2.25E-03
61	GO:0004356: glutamate-ammonia ligase activity	2.25E-03
62	GO:0010294: abscisic acid glucosyltransferase activity	2.25E-03
63	GO:0019137: thioglucosidase activity	2.77E-03
64	GO:0030976: thiamine pyrophosphate binding	2.77E-03
65	GO:0004197: cysteine-type endopeptidase activity	2.98E-03
66	GO:0004849: uridine kinase activity	3.33E-03
67	GO:0003730: mRNA 3'-UTR binding	3.33E-03
68	GO:0005261: cation channel activity	3.33E-03
69	GO:0004124: cysteine synthase activity	3.33E-03
70	GO:0004620: phospholipase activity	3.93E-03
71	GO:0016831: carboxy-lyase activity	3.93E-03
72	GO:0015144: carbohydrate transmembrane transporter activity	4.66E-03
73	GO:0005267: potassium channel activity	5.22E-03
74	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	5.22E-03
75	GO:0008142: oxysterol binding	5.22E-03
76	GO:0005351: sugar:proton symporter activity	5.42E-03
77	GO:0000989: transcription factor activity, transcription factor binding	5.92E-03
78	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	5.92E-03
79	GO:0005507: copper ion binding	5.98E-03
80	GO:0050897: cobalt ion binding	6.07E-03
81	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	6.64E-03
82	GO:0008171: O-methyltransferase activity	7.40E-03
83	GO:0047372: acylglycerol lipase activity	8.19E-03
84	GO:0000976: transcription regulatory region sequence-specific DNA binding	9.00E-03
85	GO:0004521: endoribonuclease activity	9.00E-03
86	GO:0005262: calcium channel activity	9.85E-03
87	GO:0019888: protein phosphatase regulator activity	9.85E-03
88	GO:0004175: endopeptidase activity	1.07E-02
89	GO:0004970: ionotropic glutamate receptor activity	1.16E-02
90	GO:0005217: intracellular ligand-gated ion channel activity	1.16E-02
91	GO:0004407: histone deacetylase activity	1.35E-02
92	GO:0043424: protein histidine kinase binding	1.45E-02
93	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.51E-02
94	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.51E-02
95	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.55E-02
96	GO:0004707: MAP kinase activity	1.55E-02
97	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.55E-02
98	GO:0005524: ATP binding	1.61E-02
99	GO:0005515: protein binding	1.73E-02
100	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.78E-02
101	GO:0003756: protein disulfide isomerase activity	1.86E-02
102	GO:0003924: GTPase activity	2.10E-02
103	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.13E-02
104	GO:0030170: pyridoxal phosphate binding	2.30E-02
105	GO:0005355: glucose transmembrane transporter activity	2.32E-02
106	GO:0016853: isomerase activity	2.32E-02
107	GO:0004872: receptor activity	2.43E-02
108	GO:0005525: GTP binding	2.55E-02
109	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.80E-02
110	GO:0005200: structural constituent of cytoskeleton	3.06E-02
111	GO:0005509: calcium ion binding	3.07E-02
112	GO:0008289: lipid binding	3.17E-02
113	GO:0008194: UDP-glycosyltransferase activity	3.20E-02
114	GO:0043565: sequence-specific DNA binding	3.21E-02
115	GO:0005506: iron ion binding	3.37E-02
116	GO:0042802: identical protein binding	3.64E-02
117	GO:0102483: scopolin beta-glucosidase activity	3.73E-02
118	GO:0030247: polysaccharide binding	3.73E-02
119	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.87E-02
120	GO:0008236: serine-type peptidase activity	3.87E-02
121	GO:0005096: GTPase activator activity	4.16E-02
122	GO:0003682: chromatin binding	4.67E-02
123	GO:0003993: acid phosphatase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0010009: cytoplasmic side of endosome membrane	0.00E+00
2	GO:0005785: signal recognition particle receptor complex	0.00E+00
3	GO:0016021: integral component of membrane	4.48E-07
4	GO:0005886: plasma membrane	9.55E-06
5	GO:0005773: vacuole	2.69E-05
6	GO:0005774: vacuolar membrane	6.49E-05
7	GO:0005777: peroxisome	2.71E-04
8	GO:0005783: endoplasmic reticulum	2.94E-04
9	GO:0042406: extrinsic component of endoplasmic reticulum membrane	9.22E-04
10	GO:0009506: plasmodesma	1.08E-03
11	GO:0000323: lytic vacuole	1.32E-03
12	GO:0005849: mRNA cleavage factor complex	1.32E-03
13	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.76E-03
14	GO:0005789: endoplasmic reticulum membrane	2.48E-03
15	GO:0030140: trans-Golgi network transport vesicle	2.77E-03
16	GO:0005851: eukaryotic translation initiation factor 2B complex	2.77E-03
17	GO:0005794: Golgi apparatus	3.04E-03
18	GO:0000815: ESCRT III complex	3.33E-03
19	GO:0005778: peroxisomal membrane	3.59E-03
20	GO:0005829: cytosol	3.90E-03
21	GO:0012507: ER to Golgi transport vesicle membrane	4.56E-03
22	GO:0030131: clathrin adaptor complex	4.56E-03
23	GO:0005779: integral component of peroxisomal membrane	5.22E-03
24	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	5.22E-03
25	GO:0034045: pre-autophagosomal structure membrane	5.22E-03
26	GO:0009514: glyoxysome	5.22E-03
27	GO:0005737: cytoplasm	5.50E-03
28	GO:0031901: early endosome membrane	5.92E-03
29	GO:0030125: clathrin vesicle coat	7.40E-03
30	GO:0031201: SNARE complex	7.91E-03
31	GO:0000159: protein phosphatase type 2A complex	8.19E-03
32	GO:0005765: lysosomal membrane	8.19E-03
33	GO:0016020: membrane	9.29E-03
34	GO:0005769: early endosome	1.25E-02
35	GO:0070469: respiratory chain	1.45E-02
36	GO:0005741: mitochondrial outer membrane	1.55E-02
37	GO:0005905: clathrin-coated pit	1.55E-02
38	GO:0005770: late endosome	2.20E-02
39	GO:0043231: intracellular membrane-bounded organelle	2.37E-02
40	GO:0031965: nuclear membrane	2.43E-02
41	GO:0000785: chromatin	2.68E-02
42	GO:0005768: endosome	2.96E-02
43	GO:0000932: P-body	3.32E-02
44	GO:0000325: plant-type vacuole	4.45E-02
45	GO:0000786: nucleosome	4.60E-02