co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G76180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0060213: positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	0.00E+00
2	GO:0000390: spliceosomal complex disassembly	0.00E+00
3	GO:0010730: negative regulation of hydrogen peroxide biosynthetic process	0.00E+00
4	GO:0009415: response to water	9.94E-05
5	GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic	1.44E-04
6	GO:0010184: cytokinin transport	1.44E-04
7	GO:0006950: response to stress	1.97E-04
8	GO:0030003: cellular cation homeostasis	3.29E-04
9	GO:0045948: positive regulation of translational initiation	3.29E-04
10	GO:0033523: histone H2B ubiquitination	5.40E-04
11	GO:0030029: actin filament-based process	5.40E-04
12	GO:0042344: indole glucosinolate catabolic process	5.40E-04
13	GO:0006954: inflammatory response	5.40E-04
14	GO:0010601: positive regulation of auxin biosynthetic process	7.73E-04
15	GO:0015749: monosaccharide transport	7.73E-04
16	GO:0009650: UV protection	7.73E-04
17	GO:1901332: negative regulation of lateral root development	7.73E-04
18	GO:0006882: cellular zinc ion homeostasis	7.73E-04
19	GO:0006646: phosphatidylethanolamine biosynthetic process	1.02E-03
20	GO:0015743: malate transport	1.02E-03
21	GO:0033320: UDP-D-xylose biosynthetic process	1.02E-03
22	GO:0022622: root system development	1.02E-03
23	GO:0006370: 7-methylguanosine mRNA capping	1.02E-03
24	GO:0006878: cellular copper ion homeostasis	1.02E-03
25	GO:0048544: recognition of pollen	1.09E-03
26	GO:0043097: pyrimidine nucleoside salvage	1.29E-03
27	GO:0005513: detection of calcium ion	1.29E-03
28	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.29E-03
29	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.59E-03
30	GO:0042732: D-xylose metabolic process	1.59E-03
31	GO:0010286: heat acclimation	1.59E-03
32	GO:0006206: pyrimidine nucleobase metabolic process	1.59E-03
33	GO:0045926: negative regulation of growth	1.91E-03
34	GO:0009612: response to mechanical stimulus	1.91E-03
35	GO:0006694: steroid biosynthetic process	1.91E-03
36	GO:0007623: circadian rhythm	1.95E-03
37	GO:0048573: photoperiodism, flowering	2.09E-03
38	GO:0032880: regulation of protein localization	2.24E-03
39	GO:0098869: cellular oxidant detoxification	2.24E-03
40	GO:0048437: floral organ development	2.24E-03
41	GO:0006333: chromatin assembly or disassembly	2.24E-03
42	GO:0010468: regulation of gene expression	2.44E-03
43	GO:0006811: ion transport	2.55E-03
44	GO:0006979: response to oxidative stress	2.60E-03
45	GO:0009819: drought recovery	2.60E-03
46	GO:0006491: N-glycan processing	2.60E-03
47	GO:0006367: transcription initiation from RNA polymerase II promoter	2.96E-03
48	GO:0046916: cellular transition metal ion homeostasis	3.35E-03
49	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.76E-03
50	GO:0006535: cysteine biosynthetic process from serine	4.18E-03
51	GO:0000165: MAPK cascade	4.54E-03
52	GO:0006816: calcium ion transport	4.61E-03
53	GO:0009682: induced systemic resistance	4.61E-03
54	GO:0052544: defense response by callose deposition in cell wall	4.61E-03
55	GO:0051603: proteolysis involved in cellular protein catabolic process	5.22E-03
56	GO:0006511: ubiquitin-dependent protein catabolic process	5.44E-03
57	GO:2000012: regulation of auxin polar transport	5.52E-03
58	GO:0010102: lateral root morphogenesis	5.52E-03
59	GO:0007034: vacuolar transport	6.00E-03
60	GO:0009225: nucleotide-sugar metabolic process	6.50E-03
61	GO:0006863: purine nucleobase transport	7.00E-03
62	GO:0019344: cysteine biosynthetic process	7.52E-03
63	GO:0006825: copper ion transport	8.06E-03
64	GO:0016575: histone deacetylation	8.06E-03
65	GO:0006874: cellular calcium ion homeostasis	8.06E-03
66	GO:0009269: response to desiccation	8.61E-03
67	GO:0007165: signal transduction	9.22E-03
68	GO:0009737: response to abscisic acid	9.58E-03
69	GO:0009414: response to water deprivation	9.60E-03
70	GO:0071215: cellular response to abscisic acid stimulus	9.75E-03
71	GO:0048443: stamen development	1.03E-02
72	GO:0008284: positive regulation of cell proliferation	1.09E-02
73	GO:0015991: ATP hydrolysis coupled proton transport	1.16E-02
74	GO:0042631: cellular response to water deprivation	1.16E-02
75	GO:0000226: microtubule cytoskeleton organization	1.16E-02
76	GO:0042391: regulation of membrane potential	1.16E-02
77	GO:0046323: glucose import	1.22E-02
78	GO:0009960: endosperm development	1.22E-02
79	GO:0009958: positive gravitropism	1.22E-02
80	GO:0006814: sodium ion transport	1.28E-02
81	GO:0042752: regulation of circadian rhythm	1.28E-02
82	GO:0009556: microsporogenesis	1.35E-02
83	GO:0008654: phospholipid biosynthetic process	1.35E-02
84	GO:0006635: fatty acid beta-oxidation	1.41E-02
85	GO:0006470: protein dephosphorylation	1.42E-02
86	GO:0009617: response to bacterium	1.49E-02
87	GO:0009409: response to cold	1.57E-02
88	GO:0019760: glucosinolate metabolic process	1.62E-02
89	GO:0035556: intracellular signal transduction	1.62E-02
90	GO:0006914: autophagy	1.62E-02
91	GO:0016126: sterol biosynthetic process	1.84E-02
92	GO:0009911: positive regulation of flower development	1.84E-02
93	GO:0006970: response to osmotic stress	2.08E-02
94	GO:0009651: response to salt stress	2.09E-02
95	GO:0009817: defense response to fungus, incompatible interaction	2.22E-02
96	GO:0018298: protein-chromophore linkage	2.22E-02
97	GO:0006499: N-terminal protein myristoylation	2.38E-02
98	GO:0010043: response to zinc ion	2.46E-02
99	GO:0009631: cold acclimation	2.46E-02
100	GO:0048527: lateral root development	2.46E-02
101	GO:0010119: regulation of stomatal movement	2.46E-02
102	GO:0016192: vesicle-mediated transport	2.52E-02
103	GO:0009637: response to blue light	2.63E-02
104	GO:0006099: tricarboxylic acid cycle	2.71E-02
105	GO:0030001: metal ion transport	2.88E-02
106	GO:0006897: endocytosis	2.97E-02
107	GO:0042542: response to hydrogen peroxide	3.06E-02
108	GO:0051707: response to other organism	3.15E-02
109	GO:0000209: protein polyubiquitination	3.23E-02
110	GO:0009644: response to high light intensity	3.33E-02
111	GO:0042742: defense response to bacterium	3.66E-02
112	GO:0016310: phosphorylation	3.78E-02
113	GO:0006813: potassium ion transport	3.89E-02
114	GO:0009626: plant-type hypersensitive response	4.58E-02
115	GO:0009620: response to fungus	4.68E-02
116	GO:0009553: embryo sac development	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:1990446: U1 snRNP binding	0.00E+00
2	GO:0005272: sodium channel activity	0.00E+00
3	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
4	GO:0004482: mRNA (guanine-N7-)-methyltransferase activity	0.00E+00
5	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
6	GO:0015211: purine nucleoside transmembrane transporter activity	0.00E+00
7	GO:0009679: hexose:proton symporter activity	1.44E-04
8	GO:0046870: cadmium ion binding	1.44E-04
9	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.44E-04
10	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.44E-04
11	GO:0001047: core promoter binding	3.29E-04
12	GO:0032791: lead ion binding	3.29E-04
13	GO:0004609: phosphatidylserine decarboxylase activity	3.29E-04
14	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	3.29E-04
15	GO:0019829: cation-transporting ATPase activity	5.40E-04
16	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	5.40E-04
17	GO:0004707: MAP kinase activity	6.31E-04
18	GO:0004108: citrate (Si)-synthase activity	7.73E-04
19	GO:0030527: structural constituent of chromatin	7.73E-04
20	GO:0005253: anion channel activity	1.02E-03
21	GO:0015145: monosaccharide transmembrane transporter activity	1.29E-03
22	GO:0048040: UDP-glucuronate decarboxylase activity	1.59E-03
23	GO:0004629: phospholipase C activity	1.59E-03
24	GO:0031369: translation initiation factor binding	1.59E-03
25	GO:0019137: thioglucosidase activity	1.59E-03
26	GO:0004124: cysteine synthase activity	1.91E-03
27	GO:0070403: NAD+ binding	1.91E-03
28	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.91E-03
29	GO:0005261: cation channel activity	1.91E-03
30	GO:0004849: uridine kinase activity	1.91E-03
31	GO:0004602: glutathione peroxidase activity	1.91E-03
32	GO:0004435: phosphatidylinositol phospholipase C activity	1.91E-03
33	GO:0005509: calcium ion binding	2.22E-03
34	GO:0009881: photoreceptor activity	2.24E-03
35	GO:0015140: malate transmembrane transporter activity	2.24E-03
36	GO:0004525: ribonuclease III activity	2.60E-03
37	GO:0005267: potassium channel activity	2.96E-03
38	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	2.96E-03
39	GO:0005375: copper ion transmembrane transporter activity	2.96E-03
40	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.35E-03
41	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	3.76E-03
42	GO:0004842: ubiquitin-protein transferase activity	4.51E-03
43	GO:0005262: calcium channel activity	5.52E-03
44	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	5.52E-03
45	GO:0008081: phosphoric diester hydrolase activity	5.52E-03
46	GO:0008083: growth factor activity	6.00E-03
47	GO:0030552: cAMP binding	6.50E-03
48	GO:0030553: cGMP binding	6.50E-03
49	GO:0005217: intracellular ligand-gated ion channel activity	6.50E-03
50	GO:0004970: ionotropic glutamate receptor activity	6.50E-03
51	GO:0051536: iron-sulfur cluster binding	7.52E-03
52	GO:0004407: histone deacetylase activity	7.52E-03
53	GO:0005345: purine nucleobase transmembrane transporter activity	8.06E-03
54	GO:0005216: ion channel activity	8.06E-03
55	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	9.23E-03
56	GO:0003727: single-stranded RNA binding	1.03E-02
57	GO:0005249: voltage-gated potassium channel activity	1.16E-02
58	GO:0030551: cyclic nucleotide binding	1.16E-02
59	GO:0016301: kinase activity	1.26E-02
60	GO:0004197: cysteine-type endopeptidase activity	1.48E-02
61	GO:0005200: structural constituent of cytoskeleton	1.69E-02
62	GO:0046982: protein heterodimerization activity	1.89E-02
63	GO:0102483: scopolin beta-glucosidase activity	2.06E-02
64	GO:0030247: polysaccharide binding	2.06E-02
65	GO:0005096: GTPase activator activity	2.30E-02
66	GO:0005507: copper ion binding	2.36E-02
67	GO:0004497: monooxygenase activity	2.39E-02
68	GO:0003697: single-stranded DNA binding	2.63E-02
69	GO:0008422: beta-glucosidase activity	2.80E-02
70	GO:0004871: signal transducer activity	3.00E-02
71	GO:0004722: protein serine/threonine phosphatase activity	3.14E-02
72	GO:0035091: phosphatidylinositol binding	3.33E-02
73	GO:0005198: structural molecule activity	3.42E-02
74	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.89E-02
75	GO:0003824: catalytic activity	4.10E-02
76	GO:0031625: ubiquitin protein ligase binding	4.18E-02
77	GO:0008234: cysteine-type peptidase activity	4.18E-02
78	GO:0005524: ATP binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0031981: nuclear lumen	0.00E+00
2	GO:0071008: U2-type post-mRNA release spliceosomal complex	0.00E+00
3	GO:0005886: plasma membrane	5.68E-04
4	GO:0000323: lytic vacuole	7.73E-04
5	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.02E-03
6	GO:0005776: autophagosome	1.02E-03
7	GO:0000815: ESCRT III complex	1.91E-03
8	GO:0016363: nuclear matrix	1.91E-03
9	GO:0030131: clathrin adaptor complex	2.60E-03
10	GO:0000786: nucleosome	2.79E-03
11	GO:0030125: clathrin vesicle coat	4.18E-03
12	GO:0005777: peroxisome	4.21E-03
13	GO:0005665: DNA-directed RNA polymerase II, core complex	5.06E-03
14	GO:0005764: lysosome	6.00E-03
15	GO:0010008: endosome membrane	6.16E-03
16	GO:0005905: clathrin-coated pit	8.61E-03
17	GO:0031410: cytoplasmic vesicle	9.17E-03
18	GO:0031965: nuclear membrane	1.35E-02
19	GO:0005615: extracellular space	1.39E-02
20	GO:0000785: chromatin	1.48E-02
21	GO:0016021: integral component of membrane	1.73E-02
22	GO:0000932: P-body	1.84E-02
23	GO:0005737: cytoplasm	2.09E-02
24	GO:0005768: endosome	3.21E-02
25	GO:0005887: integral component of plasma membrane	4.77E-02