GO Enrichment Analysis of Co-expressed Genes with
AT1G76100
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 2 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 3 | GO:0009773: photosynthetic electron transport in photosystem I | 8.53E-08 |
| 4 | GO:0015995: chlorophyll biosynthetic process | 3.63E-07 |
| 5 | GO:0010205: photoinhibition | 4.27E-06 |
| 6 | GO:0080170: hydrogen peroxide transmembrane transport | 1.01E-05 |
| 7 | GO:0010207: photosystem II assembly | 1.46E-05 |
| 8 | GO:0015979: photosynthesis | 2.23E-05 |
| 9 | GO:0009913: epidermal cell differentiation | 4.59E-05 |
| 10 | GO:0042549: photosystem II stabilization | 4.59E-05 |
| 11 | GO:0034220: ion transmembrane transport | 6.82E-05 |
| 12 | GO:0010027: thylakoid membrane organization | 1.79E-04 |
| 13 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.23E-04 |
| 14 | GO:0035304: regulation of protein dephosphorylation | 3.51E-04 |
| 15 | GO:0043255: regulation of carbohydrate biosynthetic process | 3.51E-04 |
| 16 | GO:0010115: regulation of abscisic acid biosynthetic process | 3.51E-04 |
| 17 | GO:0001736: establishment of planar polarity | 3.51E-04 |
| 18 | GO:0010024: phytochromobilin biosynthetic process | 3.51E-04 |
| 19 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.51E-04 |
| 20 | GO:0006810: transport | 4.43E-04 |
| 21 | GO:0010167: response to nitrate | 4.65E-04 |
| 22 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.19E-04 |
| 23 | GO:0006833: water transport | 5.19E-04 |
| 24 | GO:0006788: heme oxidation | 5.75E-04 |
| 25 | GO:0015714: phosphoenolpyruvate transport | 5.75E-04 |
| 26 | GO:0090391: granum assembly | 5.75E-04 |
| 27 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 8.23E-04 |
| 28 | GO:1901332: negative regulation of lateral root development | 8.23E-04 |
| 29 | GO:0071484: cellular response to light intensity | 8.23E-04 |
| 30 | GO:0009306: protein secretion | 8.91E-04 |
| 31 | GO:0045727: positive regulation of translation | 1.09E-03 |
| 32 | GO:0015713: phosphoglycerate transport | 1.09E-03 |
| 33 | GO:0030104: water homeostasis | 1.09E-03 |
| 34 | GO:0010021: amylopectin biosynthetic process | 1.09E-03 |
| 35 | GO:0030308: negative regulation of cell growth | 1.38E-03 |
| 36 | GO:0016120: carotene biosynthetic process | 1.38E-03 |
| 37 | GO:0009228: thiamine biosynthetic process | 1.70E-03 |
| 38 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.70E-03 |
| 39 | GO:0010337: regulation of salicylic acid metabolic process | 1.70E-03 |
| 40 | GO:0006561: proline biosynthetic process | 1.70E-03 |
| 41 | GO:0006751: glutathione catabolic process | 1.70E-03 |
| 42 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.70E-03 |
| 43 | GO:0010019: chloroplast-nucleus signaling pathway | 2.03E-03 |
| 44 | GO:0010196: nonphotochemical quenching | 2.39E-03 |
| 45 | GO:1900057: positive regulation of leaf senescence | 2.39E-03 |
| 46 | GO:0010444: guard mother cell differentiation | 2.39E-03 |
| 47 | GO:0009395: phospholipid catabolic process | 2.39E-03 |
| 48 | GO:0009772: photosynthetic electron transport in photosystem II | 2.39E-03 |
| 49 | GO:0010311: lateral root formation | 2.67E-03 |
| 50 | GO:0008610: lipid biosynthetic process | 2.77E-03 |
| 51 | GO:0005978: glycogen biosynthetic process | 2.77E-03 |
| 52 | GO:0006605: protein targeting | 2.77E-03 |
| 53 | GO:0055075: potassium ion homeostasis | 2.77E-03 |
| 54 | GO:0032544: plastid translation | 3.16E-03 |
| 55 | GO:0009735: response to cytokinin | 3.46E-03 |
| 56 | GO:0010206: photosystem II repair | 3.58E-03 |
| 57 | GO:0009416: response to light stimulus | 3.96E-03 |
| 58 | GO:0005982: starch metabolic process | 4.01E-03 |
| 59 | GO:0009638: phototropism | 4.01E-03 |
| 60 | GO:0006032: chitin catabolic process | 4.46E-03 |
| 61 | GO:0009688: abscisic acid biosynthetic process | 4.46E-03 |
| 62 | GO:0048829: root cap development | 4.46E-03 |
| 63 | GO:0019684: photosynthesis, light reaction | 4.92E-03 |
| 64 | GO:0043085: positive regulation of catalytic activity | 4.92E-03 |
| 65 | GO:0009750: response to fructose | 4.92E-03 |
| 66 | GO:0048765: root hair cell differentiation | 4.92E-03 |
| 67 | GO:0046856: phosphatidylinositol dephosphorylation | 4.92E-03 |
| 68 | GO:0000038: very long-chain fatty acid metabolic process | 4.92E-03 |
| 69 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 5.25E-03 |
| 70 | GO:0015706: nitrate transport | 5.41E-03 |
| 71 | GO:0055085: transmembrane transport | 5.69E-03 |
| 72 | GO:0009785: blue light signaling pathway | 5.91E-03 |
| 73 | GO:0010628: positive regulation of gene expression | 5.91E-03 |
| 74 | GO:0009718: anthocyanin-containing compound biosynthetic process | 5.91E-03 |
| 75 | GO:0006094: gluconeogenesis | 5.91E-03 |
| 76 | GO:0006857: oligopeptide transport | 5.95E-03 |
| 77 | GO:0010143: cutin biosynthetic process | 6.42E-03 |
| 78 | GO:0009825: multidimensional cell growth | 6.95E-03 |
| 79 | GO:0071732: cellular response to nitric oxide | 6.95E-03 |
| 80 | GO:0010030: positive regulation of seed germination | 6.95E-03 |
| 81 | GO:0010053: root epidermal cell differentiation | 6.95E-03 |
| 82 | GO:0010025: wax biosynthetic process | 7.49E-03 |
| 83 | GO:0009624: response to nematode | 7.91E-03 |
| 84 | GO:2000377: regulation of reactive oxygen species metabolic process | 8.05E-03 |
| 85 | GO:0009651: response to salt stress | 8.38E-03 |
| 86 | GO:0007017: microtubule-based process | 8.63E-03 |
| 87 | GO:0031408: oxylipin biosynthetic process | 9.22E-03 |
| 88 | GO:0016114: terpenoid biosynthetic process | 9.22E-03 |
| 89 | GO:0003333: amino acid transmembrane transport | 9.22E-03 |
| 90 | GO:0016998: cell wall macromolecule catabolic process | 9.22E-03 |
| 91 | GO:0048511: rhythmic process | 9.22E-03 |
| 92 | GO:0019915: lipid storage | 9.22E-03 |
| 93 | GO:0071369: cellular response to ethylene stimulus | 1.04E-02 |
| 94 | GO:0009561: megagametogenesis | 1.11E-02 |
| 95 | GO:0009414: response to water deprivation | 1.11E-02 |
| 96 | GO:0042127: regulation of cell proliferation | 1.11E-02 |
| 97 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.17E-02 |
| 98 | GO:0016117: carotenoid biosynthetic process | 1.17E-02 |
| 99 | GO:0042335: cuticle development | 1.24E-02 |
| 100 | GO:0000413: protein peptidyl-prolyl isomerization | 1.24E-02 |
| 101 | GO:0042631: cellular response to water deprivation | 1.24E-02 |
| 102 | GO:0006633: fatty acid biosynthetic process | 1.25E-02 |
| 103 | GO:0009734: auxin-activated signaling pathway | 1.28E-02 |
| 104 | GO:0071472: cellular response to salt stress | 1.31E-02 |
| 105 | GO:0010305: leaf vascular tissue pattern formation | 1.31E-02 |
| 106 | GO:0009958: positive gravitropism | 1.31E-02 |
| 107 | GO:0010182: sugar mediated signaling pathway | 1.31E-02 |
| 108 | GO:0015986: ATP synthesis coupled proton transport | 1.37E-02 |
| 109 | GO:0042752: regulation of circadian rhythm | 1.37E-02 |
| 110 | GO:0048825: cotyledon development | 1.44E-02 |
| 111 | GO:0019252: starch biosynthetic process | 1.44E-02 |
| 112 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.52E-02 |
| 113 | GO:0007166: cell surface receptor signaling pathway | 1.57E-02 |
| 114 | GO:0016032: viral process | 1.59E-02 |
| 115 | GO:0071281: cellular response to iron ion | 1.66E-02 |
| 116 | GO:0009409: response to cold | 1.82E-02 |
| 117 | GO:0045893: positive regulation of transcription, DNA-templated | 2.04E-02 |
| 118 | GO:0048573: photoperiodism, flowering | 2.21E-02 |
| 119 | GO:0030244: cellulose biosynthetic process | 2.38E-02 |
| 120 | GO:0018298: protein-chromophore linkage | 2.38E-02 |
| 121 | GO:0080167: response to karrikin | 2.64E-02 |
| 122 | GO:0006865: amino acid transport | 2.72E-02 |
| 123 | GO:0009637: response to blue light | 2.81E-02 |
| 124 | GO:0009926: auxin polar transport | 3.37E-02 |
| 125 | GO:0009737: response to abscisic acid | 3.55E-02 |
| 126 | GO:0009644: response to high light intensity | 3.56E-02 |
| 127 | GO:0032259: methylation | 3.72E-02 |
| 128 | GO:0016042: lipid catabolic process | 3.78E-02 |
| 129 | GO:0006629: lipid metabolic process | 3.89E-02 |
| 130 | GO:0009408: response to heat | 3.89E-02 |
| 131 | GO:0009664: plant-type cell wall organization | 3.96E-02 |
| 132 | GO:0009809: lignin biosynthetic process | 4.17E-02 |
| 133 | GO:0006364: rRNA processing | 4.17E-02 |
| 134 | GO:0008152: metabolic process | 4.28E-02 |
| 135 | GO:0006096: glycolytic process | 4.69E-02 |
| 136 | GO:0009733: response to auxin | 4.75E-02 |
| 137 | GO:0048316: seed development | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 2 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 3 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 4 | GO:0045436: lycopene beta cyclase activity | 0.00E+00 |
| 5 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 6 | GO:0015121: phosphoenolpyruvate:phosphate antiporter activity | 1.54E-04 |
| 7 | GO:0010242: oxygen evolving activity | 1.54E-04 |
| 8 | GO:0045485: omega-6 fatty acid desaturase activity | 1.54E-04 |
| 9 | GO:0046906: tetrapyrrole binding | 1.54E-04 |
| 10 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.54E-04 |
| 11 | GO:0015250: water channel activity | 1.79E-04 |
| 12 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 3.51E-04 |
| 13 | GO:0003839: gamma-glutamylcyclotransferase activity | 3.51E-04 |
| 14 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 3.51E-04 |
| 15 | GO:0008266: poly(U) RNA binding | 4.15E-04 |
| 16 | GO:0043169: cation binding | 5.75E-04 |
| 17 | GO:0090729: toxin activity | 5.75E-04 |
| 18 | GO:0016851: magnesium chelatase activity | 8.23E-04 |
| 19 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 8.23E-04 |
| 20 | GO:0001872: (1->3)-beta-D-glucan binding | 8.23E-04 |
| 21 | GO:0010328: auxin influx transmembrane transporter activity | 1.09E-03 |
| 22 | GO:0052793: pectin acetylesterase activity | 1.09E-03 |
| 23 | GO:0004392: heme oxygenase (decyclizing) activity | 1.09E-03 |
| 24 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 1.09E-03 |
| 25 | GO:0015120: phosphoglycerate transmembrane transporter activity | 1.09E-03 |
| 26 | GO:0010011: auxin binding | 1.09E-03 |
| 27 | GO:0016746: transferase activity, transferring acyl groups | 1.15E-03 |
| 28 | GO:0004629: phospholipase C activity | 1.70E-03 |
| 29 | GO:0035673: oligopeptide transmembrane transporter activity | 1.70E-03 |
| 30 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.70E-03 |
| 31 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 1.70E-03 |
| 32 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.70E-03 |
| 33 | GO:0004332: fructose-bisphosphate aldolase activity | 1.70E-03 |
| 34 | GO:0004435: phosphatidylinositol phospholipase C activity | 2.03E-03 |
| 35 | GO:0016168: chlorophyll binding | 2.07E-03 |
| 36 | GO:0030247: polysaccharide binding | 2.30E-03 |
| 37 | GO:0019899: enzyme binding | 2.39E-03 |
| 38 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.16E-03 |
| 39 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 3.58E-03 |
| 40 | GO:0015112: nitrate transmembrane transporter activity | 4.01E-03 |
| 41 | GO:0004568: chitinase activity | 4.46E-03 |
| 42 | GO:0015293: symporter activity | 4.64E-03 |
| 43 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.82E-03 |
| 44 | GO:0016491: oxidoreductase activity | 4.92E-03 |
| 45 | GO:0008794: arsenate reductase (glutaredoxin) activity | 4.92E-03 |
| 46 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 5.41E-03 |
| 47 | GO:0015198: oligopeptide transporter activity | 5.41E-03 |
| 48 | GO:0004565: beta-galactosidase activity | 5.91E-03 |
| 49 | GO:0008081: phosphoric diester hydrolase activity | 5.91E-03 |
| 50 | GO:0004022: alcohol dehydrogenase (NAD) activity | 5.91E-03 |
| 51 | GO:0031072: heat shock protein binding | 5.91E-03 |
| 52 | GO:0004871: signal transducer activity | 6.71E-03 |
| 53 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 7.49E-03 |
| 54 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 7.49E-03 |
| 55 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 7.49E-03 |
| 56 | GO:0005528: FK506 binding | 8.05E-03 |
| 57 | GO:0043424: protein histidine kinase binding | 8.63E-03 |
| 58 | GO:0004176: ATP-dependent peptidase activity | 9.22E-03 |
| 59 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.02E-02 |
| 60 | GO:0030570: pectate lyase activity | 1.04E-02 |
| 61 | GO:0022891: substrate-specific transmembrane transporter activity | 1.04E-02 |
| 62 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.28E-02 |
| 63 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.31E-02 |
| 64 | GO:0005215: transporter activity | 1.34E-02 |
| 65 | GO:0050662: coenzyme binding | 1.37E-02 |
| 66 | GO:0016791: phosphatase activity | 1.74E-02 |
| 67 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.74E-02 |
| 68 | GO:0008483: transaminase activity | 1.81E-02 |
| 69 | GO:0005200: structural constituent of cytoskeleton | 1.81E-02 |
| 70 | GO:0016597: amino acid binding | 1.89E-02 |
| 71 | GO:0004672: protein kinase activity | 2.05E-02 |
| 72 | GO:0016788: hydrolase activity, acting on ester bonds | 2.17E-02 |
| 73 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.38E-02 |
| 74 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.43E-02 |
| 75 | GO:0005096: GTPase activator activity | 2.46E-02 |
| 76 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.55E-02 |
| 77 | GO:0003746: translation elongation factor activity | 2.81E-02 |
| 78 | GO:0003993: acid phosphatase activity | 2.90E-02 |
| 79 | GO:0052689: carboxylic ester hydrolase activity | 2.91E-02 |
| 80 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.56E-02 |
| 81 | GO:0015171: amino acid transmembrane transporter activity | 4.48E-02 |
| 82 | GO:0031625: ubiquitin protein ligase binding | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009534: chloroplast thylakoid | 3.08E-17 |
| 2 | GO:0009507: chloroplast | 2.28E-15 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 9.00E-14 |
| 4 | GO:0009579: thylakoid | 1.30E-10 |
| 5 | GO:0009941: chloroplast envelope | 2.70E-08 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 8.82E-07 |
| 7 | GO:0010287: plastoglobule | 1.48E-05 |
| 8 | GO:0031969: chloroplast membrane | 1.55E-05 |
| 9 | GO:0043674: columella | 1.54E-04 |
| 10 | GO:0009515: granal stacked thylakoid | 1.54E-04 |
| 11 | GO:0030093: chloroplast photosystem I | 3.51E-04 |
| 12 | GO:0030095: chloroplast photosystem II | 4.15E-04 |
| 13 | GO:0031977: thylakoid lumen | 4.44E-04 |
| 14 | GO:0010007: magnesium chelatase complex | 5.75E-04 |
| 15 | GO:0033281: TAT protein transport complex | 5.75E-04 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 6.32E-04 |
| 17 | GO:0015630: microtubule cytoskeleton | 8.23E-04 |
| 18 | GO:0009531: secondary cell wall | 8.23E-04 |
| 19 | GO:0005886: plasma membrane | 1.02E-03 |
| 20 | GO:0016021: integral component of membrane | 1.20E-03 |
| 21 | GO:0019898: extrinsic component of membrane | 1.28E-03 |
| 22 | GO:0009570: chloroplast stroma | 1.49E-03 |
| 23 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.70E-03 |
| 24 | GO:0042807: central vacuole | 2.39E-03 |
| 25 | GO:0009986: cell surface | 2.39E-03 |
| 26 | GO:0009533: chloroplast stromal thylakoid | 2.39E-03 |
| 27 | GO:0005887: integral component of plasma membrane | 2.64E-03 |
| 28 | GO:0009501: amyloplast | 2.77E-03 |
| 29 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.58E-03 |
| 30 | GO:0008180: COP9 signalosome | 3.58E-03 |
| 31 | GO:0009508: plastid chromosome | 5.91E-03 |
| 32 | GO:0009706: chloroplast inner membrane | 7.91E-03 |
| 33 | GO:0009522: photosystem I | 1.37E-02 |
| 34 | GO:0009523: photosystem II | 1.44E-02 |
| 35 | GO:0009505: plant-type cell wall | 1.62E-02 |
| 36 | GO:0009295: nucleoid | 1.81E-02 |
| 37 | GO:0010319: stromule | 1.81E-02 |
| 38 | GO:0016020: membrane | 1.82E-02 |
| 39 | GO:0019005: SCF ubiquitin ligase complex | 2.38E-02 |
| 40 | GO:0000502: proteasome complex | 4.17E-02 |