Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G75350

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905499: trichome papilla formation0.00E+00
2GO:0006399: tRNA metabolic process0.00E+00
3GO:0006437: tyrosyl-tRNA aminoacylation0.00E+00
4GO:0002184: cytoplasmic translational termination0.00E+00
5GO:0006780: uroporphyrinogen III biosynthetic process0.00E+00
6GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
7GO:0033494: ferulate metabolic process0.00E+00
8GO:0061635: regulation of protein complex stability0.00E+00
9GO:0016553: base conversion or substitution editing0.00E+00
10GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
11GO:0015805: S-adenosyl-L-methionine transport0.00E+00
12GO:0042821: pyridoxal biosynthetic process0.00E+00
13GO:0007638: mechanosensory behavior0.00E+00
14GO:0042820: vitamin B6 catabolic process0.00E+00
15GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
16GO:0042493: response to drug0.00E+00
17GO:0006412: translation7.93E-16
18GO:0032544: plastid translation1.36E-15
19GO:0015979: photosynthesis3.07E-11
20GO:0009735: response to cytokinin3.32E-11
21GO:0009658: chloroplast organization7.71E-10
22GO:0009773: photosynthetic electron transport in photosystem I8.39E-10
23GO:0042254: ribosome biogenesis8.60E-10
24GO:0030388: fructose 1,6-bisphosphate metabolic process1.02E-05
25GO:0010027: thylakoid membrane organization1.67E-05
26GO:0010196: nonphotochemical quenching1.71E-05
27GO:0006000: fructose metabolic process3.47E-05
28GO:0006518: peptide metabolic process3.47E-05
29GO:0015976: carbon utilization1.30E-04
30GO:2000122: negative regulation of stomatal complex development1.30E-04
31GO:0006546: glycine catabolic process1.30E-04
32GO:0010037: response to carbon dioxide1.30E-04
33GO:0010207: photosystem II assembly1.85E-04
34GO:0019253: reductive pentose-phosphate cycle1.85E-04
35GO:0045454: cell redox homeostasis2.78E-04
36GO:0042549: photosystem II stabilization2.83E-04
37GO:0010190: cytochrome b6f complex assembly2.83E-04
38GO:0061077: chaperone-mediated protein folding3.81E-04
39GO:0071588: hydrogen peroxide mediated signaling pathway4.81E-04
40GO:0010729: positive regulation of hydrogen peroxide biosynthetic process4.81E-04
41GO:0009443: pyridoxal 5'-phosphate salvage4.81E-04
42GO:0043489: RNA stabilization4.81E-04
43GO:1904966: positive regulation of vitamin E biosynthetic process4.81E-04
44GO:1904964: positive regulation of phytol biosynthetic process4.81E-04
45GO:0042371: vitamin K biosynthetic process4.81E-04
46GO:0016117: carotenoid biosynthetic process5.96E-04
47GO:0042335: cuticle development6.58E-04
48GO:0000413: protein peptidyl-prolyl isomerization6.58E-04
49GO:0006002: fructose 6-phosphate metabolic process7.39E-04
50GO:0009657: plastid organization7.39E-04
51GO:0006810: transport9.00E-04
52GO:0042742: defense response to bacterium9.13E-04
53GO:0043039: tRNA aminoacylation1.04E-03
54GO:1902326: positive regulation of chlorophyll biosynthetic process1.04E-03
55GO:0043085: positive regulation of catalytic activity1.40E-03
56GO:0006415: translational termination1.40E-03
57GO:0018119: peptidyl-cysteine S-nitrosylation1.40E-03
58GO:0090506: axillary shoot meristem initiation1.69E-03
59GO:0006954: inflammatory response1.69E-03
60GO:0090391: granum assembly1.69E-03
61GO:0010581: regulation of starch biosynthetic process1.69E-03
62GO:0071492: cellular response to UV-A1.69E-03
63GO:0006696: ergosterol biosynthetic process1.69E-03
64GO:0006094: gluconeogenesis1.82E-03
65GO:0005986: sucrose biosynthetic process1.82E-03
66GO:0015995: chlorophyll biosynthetic process1.85E-03
67GO:0009409: response to cold2.00E-03
68GO:0010020: chloroplast fission2.05E-03
69GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.45E-03
70GO:0007231: osmosensory signaling pathway2.45E-03
71GO:0009650: UV protection2.45E-03
72GO:0010731: protein glutathionylation2.45E-03
73GO:0006424: glutamyl-tRNA aminoacylation2.45E-03
74GO:0043572: plastid fission2.45E-03
75GO:2001141: regulation of RNA biosynthetic process2.45E-03
76GO:0006418: tRNA aminoacylation for protein translation3.15E-03
77GO:0071486: cellular response to high light intensity3.30E-03
78GO:0019464: glycine decarboxylation via glycine cleavage system3.30E-03
79GO:0009765: photosynthesis, light harvesting3.30E-03
80GO:0045727: positive regulation of translation3.30E-03
81GO:0033500: carbohydrate homeostasis3.30E-03
82GO:0031365: N-terminal protein amino acid modification4.23E-03
83GO:0006461: protein complex assembly4.23E-03
84GO:0016123: xanthophyll biosynthetic process4.23E-03
85GO:0006665: sphingolipid metabolic process4.23E-03
86GO:0032543: mitochondrial translation4.23E-03
87GO:0016120: carotene biosynthetic process4.23E-03
88GO:0006564: L-serine biosynthetic process4.23E-03
89GO:0055114: oxidation-reduction process4.39E-03
90GO:0006869: lipid transport4.92E-03
91GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway5.24E-03
92GO:0016554: cytidine to uridine editing5.24E-03
93GO:0009854: oxidative photosynthetic carbon pathway6.32E-03
94GO:0010019: chloroplast-nucleus signaling pathway6.32E-03
95GO:0010555: response to mannitol6.32E-03
96GO:0009955: adaxial/abaxial pattern specification6.32E-03
97GO:0042372: phylloquinone biosynthetic process6.32E-03
98GO:0010067: procambium histogenesis6.32E-03
99GO:0042026: protein refolding6.32E-03
100GO:0006458: 'de novo' protein folding6.32E-03
101GO:0006694: steroid biosynthetic process6.32E-03
102GO:1901259: chloroplast rRNA processing6.32E-03
103GO:0006400: tRNA modification7.48E-03
104GO:0006457: protein folding8.71E-03
105GO:0030091: protein repair8.71E-03
106GO:0009819: drought recovery8.71E-03
107GO:0009642: response to light intensity8.71E-03
108GO:0017004: cytochrome complex assembly1.00E-02
109GO:0009808: lignin metabolic process1.00E-02
110GO:0071482: cellular response to light stimulus1.00E-02
111GO:0019430: removal of superoxide radicals1.00E-02
112GO:0010206: photosystem II repair1.14E-02
113GO:0006779: porphyrin-containing compound biosynthetic process1.28E-02
114GO:0042761: very long-chain fatty acid biosynthetic process1.28E-02
115GO:1900865: chloroplast RNA modification1.28E-02
116GO:0010380: regulation of chlorophyll biosynthetic process1.28E-02
117GO:0009817: defense response to fungus, incompatible interaction1.34E-02
118GO:0018298: protein-chromophore linkage1.34E-02
119GO:0043069: negative regulation of programmed cell death1.43E-02
120GO:0006949: syncytium formation1.43E-02
121GO:0042744: hydrogen peroxide catabolic process1.43E-02
122GO:0006782: protoporphyrinogen IX biosynthetic process1.43E-02
123GO:0009790: embryo development1.48E-02
124GO:0010119: regulation of stomatal movement1.55E-02
125GO:0009631: cold acclimation1.55E-02
126GO:0006816: calcium ion transport1.58E-02
127GO:0009073: aromatic amino acid family biosynthetic process1.58E-02
128GO:0006352: DNA-templated transcription, initiation1.58E-02
129GO:0009750: response to fructose1.58E-02
130GO:0009637: response to blue light1.70E-02
131GO:0005983: starch catabolic process1.74E-02
132GO:0034599: cellular response to oxidative stress1.78E-02
133GO:0045490: pectin catabolic process1.83E-02
134GO:0009793: embryo development ending in seed dormancy1.88E-02
135GO:0009767: photosynthetic electron transport chain1.91E-02
136GO:0006006: glucose metabolic process1.91E-02
137GO:0006839: mitochondrial transport1.94E-02
138GO:0010143: cutin biosynthetic process2.08E-02
139GO:0010223: secondary shoot formation2.08E-02
140GO:0010114: response to red light2.19E-02
141GO:0005985: sucrose metabolic process2.26E-02
142GO:0070588: calcium ion transmembrane transport2.26E-02
143GO:0019762: glucosinolate catabolic process2.44E-02
144GO:0010025: wax biosynthetic process2.44E-02
145GO:0006636: unsaturated fatty acid biosynthetic process2.44E-02
146GO:0019344: cysteine biosynthetic process2.62E-02
147GO:0000027: ribosomal large subunit assembly2.62E-02
148GO:0009768: photosynthesis, light harvesting in photosystem I2.82E-02
149GO:0006364: rRNA processing2.96E-02
150GO:0080092: regulation of pollen tube growth3.21E-02
151GO:0030245: cellulose catabolic process3.21E-02
152GO:0016226: iron-sulfur cluster assembly3.21E-02
153GO:0001944: vasculature development3.42E-02
154GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.42E-02
155GO:0009411: response to UV3.42E-02
156GO:0006096: glycolytic process3.50E-02
157GO:0006508: proteolysis3.51E-02
158GO:0010089: xylem development3.63E-02
159GO:0010091: trichome branching3.63E-02
160GO:0019722: calcium-mediated signaling3.63E-02
161GO:0010087: phloem or xylem histogenesis4.06E-02
162GO:0006662: glycerol ether metabolic process4.28E-02
163GO:0006396: RNA processing4.33E-02
164GO:0016132: brassinosteroid biosynthetic process4.97E-02
165GO:0000302: response to reactive oxygen species4.97E-02
166GO:0002229: defense response to oomycetes4.97E-02
RankGO TermAdjusted P value
1GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
2GO:0004852: uroporphyrinogen-III synthase activity0.00E+00
3GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
4GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
5GO:0050614: delta24-sterol reductase activity0.00E+00
6GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
7GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
8GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
9GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
10GO:0008887: glycerate kinase activity0.00E+00
11GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
12GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
13GO:0045435: lycopene epsilon cyclase activity0.00E+00
14GO:0004822: isoleucine-tRNA ligase activity0.00E+00
15GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
16GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
17GO:0046905: phytoene synthase activity0.00E+00
18GO:0019843: rRNA binding3.77E-22
19GO:0003735: structural constituent of ribosome1.76E-18
20GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.15E-09
21GO:0051920: peroxiredoxin activity1.18E-07
22GO:0016209: antioxidant activity4.15E-07
23GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity1.02E-05
24GO:0005528: FK506 binding1.74E-05
25GO:0016149: translation release factor activity, codon specific7.46E-05
26GO:0008266: poly(U) RNA binding1.85E-04
27GO:0004222: metalloendopeptidase activity3.72E-04
28GO:0004723: calcium-dependent protein serine/threonine phosphatase activity3.78E-04
29GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity4.81E-04
30GO:0080132: fatty acid alpha-hydroxylase activity4.81E-04
31GO:0004831: tyrosine-tRNA ligase activity4.81E-04
32GO:0005080: protein kinase C binding4.81E-04
33GO:0051996: squalene synthase activity4.81E-04
34GO:0004601: peroxidase activity5.05E-04
35GO:0004033: aldo-keto reductase (NADP) activity6.06E-04
36GO:0003747: translation release factor activity8.84E-04
37GO:0042389: omega-3 fatty acid desaturase activity1.04E-03
38GO:0004618: phosphoglycerate kinase activity1.04E-03
39GO:0004617: phosphoglycerate dehydrogenase activity1.04E-03
40GO:0004047: aminomethyltransferase activity1.04E-03
41GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.04E-03
42GO:0016630: protochlorophyllide reductase activity1.04E-03
43GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity1.04E-03
44GO:0004310: farnesyl-diphosphate farnesyltransferase activity1.04E-03
45GO:0008047: enzyme activator activity1.21E-03
46GO:0016168: chlorophyll binding1.61E-03
47GO:0070402: NADPH binding1.69E-03
48GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.69E-03
49GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity1.69E-03
50GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity1.69E-03
51GO:0050734: hydroxycinnamoyltransferase activity1.69E-03
52GO:0002161: aminoacyl-tRNA editing activity1.69E-03
53GO:0004148: dihydrolipoyl dehydrogenase activity1.69E-03
54GO:0045174: glutathione dehydrogenase (ascorbate) activity1.69E-03
55GO:0030267: glyoxylate reductase (NADP) activity1.69E-03
56GO:0004089: carbonate dehydratase activity1.82E-03
57GO:0005509: calcium ion binding2.19E-03
58GO:0043023: ribosomal large subunit binding2.45E-03
59GO:0008097: 5S rRNA binding2.45E-03
60GO:0004375: glycine dehydrogenase (decarboxylating) activity2.45E-03
61GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity2.45E-03
62GO:0004659: prenyltransferase activity3.30E-03
63GO:0001053: plastid sigma factor activity3.30E-03
64GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor3.30E-03
65GO:0016987: sigma factor activity3.30E-03
66GO:1990137: plant seed peroxidase activity3.30E-03
67GO:0043495: protein anchor3.30E-03
68GO:0022891: substrate-specific transmembrane transporter activity4.14E-03
69GO:0030570: pectate lyase activity4.14E-03
70GO:0009922: fatty acid elongase activity4.23E-03
71GO:0003959: NADPH dehydrogenase activity4.23E-03
72GO:0016773: phosphotransferase activity, alcohol group as acceptor4.23E-03
73GO:0004040: amidase activity4.23E-03
74GO:0004812: aminoacyl-tRNA ligase activity4.88E-03
75GO:0008200: ion channel inhibitor activity5.24E-03
76GO:0004130: cytochrome-c peroxidase activity5.24E-03
77GO:0016208: AMP binding5.24E-03
78GO:0016688: L-ascorbate peroxidase activity5.24E-03
79GO:0004791: thioredoxin-disulfide reductase activity6.12E-03
80GO:0033743: peptide-methionine (R)-S-oxide reductase activity6.32E-03
81GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity6.32E-03
82GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.32E-03
83GO:0016831: carboxy-lyase activity7.48E-03
84GO:0008235: metalloexopeptidase activity7.48E-03
85GO:0019899: enzyme binding7.48E-03
86GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor8.02E-03
87GO:0052747: sinapyl alcohol dehydrogenase activity8.71E-03
88GO:0008237: metallopeptidase activity9.08E-03
89GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water1.00E-02
90GO:0008289: lipid binding1.08E-02
91GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors1.14E-02
92GO:0047617: acyl-CoA hydrolase activity1.28E-02
93GO:0030234: enzyme regulator activity1.43E-02
94GO:0030145: manganese ion binding1.55E-02
95GO:0004177: aminopeptidase activity1.58E-02
96GO:0044183: protein binding involved in protein folding1.58E-02
97GO:0005089: Rho guanyl-nucleotide exchange factor activity1.58E-02
98GO:0046872: metal ion binding1.63E-02
99GO:0000049: tRNA binding1.74E-02
100GO:0045551: cinnamyl-alcohol dehydrogenase activity1.74E-02
101GO:0031072: heat shock protein binding1.91E-02
102GO:0005262: calcium channel activity1.91E-02
103GO:0004565: beta-galactosidase activity1.91E-02
104GO:0004364: glutathione transferase activity2.11E-02
105GO:0051537: 2 iron, 2 sulfur cluster binding2.37E-02
106GO:0031409: pigment binding2.44E-02
107GO:0051536: iron-sulfur cluster binding2.62E-02
108GO:0004857: enzyme inhibitor activity2.62E-02
109GO:0051287: NAD binding2.66E-02
110GO:0043424: protein histidine kinase binding2.82E-02
111GO:0008324: cation transmembrane transporter activity2.82E-02
112GO:0004176: ATP-dependent peptidase activity3.01E-02
113GO:0033612: receptor serine/threonine kinase binding3.01E-02
114GO:0016788: hydrolase activity, acting on ester bonds3.24E-02
115GO:0008810: cellulase activity3.42E-02
116GO:0045735: nutrient reservoir activity3.50E-02
117GO:0047134: protein-disulfide reductase activity3.84E-02
118GO:0005102: receptor binding3.84E-02
119GO:0030599: pectinesterase activity3.96E-02
120GO:0051082: unfolded protein binding4.20E-02
121GO:0008080: N-acetyltransferase activity4.28E-02
122GO:0050662: coenzyme binding4.51E-02
123GO:0052689: carboxylic ester hydrolase activity4.66E-02
124GO:0016762: xyloglucan:xyloglucosyl transferase activity4.97E-02
125GO:0048038: quinone binding4.97E-02
RankGO TermAdjusted P value
1GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
2GO:0044391: ribosomal subunit0.00E+00
3GO:0009507: chloroplast1.66E-86
4GO:0009570: chloroplast stroma3.45E-55
5GO:0009941: chloroplast envelope5.33E-42
6GO:0009535: chloroplast thylakoid membrane2.93E-37
7GO:0009579: thylakoid2.98E-28
8GO:0009543: chloroplast thylakoid lumen1.43E-20
9GO:0009534: chloroplast thylakoid3.11E-19
10GO:0005840: ribosome1.35E-17
11GO:0031977: thylakoid lumen2.06E-14
12GO:0048046: apoplast1.60E-12
13GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.42E-08
14GO:0009654: photosystem II oxygen evolving complex1.65E-08
15GO:0000311: plastid large ribosomal subunit4.77E-06
16GO:0019898: extrinsic component of membrane5.44E-06
17GO:0030095: chloroplast photosystem II8.45E-06
18GO:0010319: stromule1.25E-05
19GO:0042651: thylakoid membrane2.15E-05
20GO:0031969: chloroplast membrane3.01E-05
21GO:0015934: large ribosomal subunit4.49E-05
22GO:0009523: photosystem II9.26E-05
23GO:0005618: cell wall4.45E-04
24GO:0009547: plastid ribosome4.81E-04
25GO:0009515: granal stacked thylakoid4.81E-04
26GO:0009923: fatty acid elongase complex4.81E-04
27GO:0009344: nitrite reductase complex [NAD(P)H]4.81E-04
28GO:0009533: chloroplast stromal thylakoid4.86E-04
29GO:0009536: plastid5.42E-04
30GO:0009505: plant-type cell wall5.76E-04
31GO:0042170: plastid membrane1.04E-03
32GO:0016020: membrane1.12E-03
33GO:0046658: anchored component of plasma membrane1.58E-03
34GO:0009706: chloroplast inner membrane1.85E-03
35GO:0010287: plastoglobule2.41E-03
36GO:0005960: glycine cleavage complex2.45E-03
37GO:0015935: small ribosomal subunit3.46E-03
38GO:0031225: anchored component of membrane4.29E-03
39GO:0022626: cytosolic ribosome4.81E-03
40GO:0009539: photosystem II reaction center1.00E-02
41GO:0005811: lipid particle1.00E-02
42GO:0005763: mitochondrial small ribosomal subunit1.14E-02
43GO:0016324: apical plasma membrane1.43E-02
44GO:0031012: extracellular matrix1.91E-02
45GO:0000312: plastid small ribosomal subunit2.08E-02
46GO:0030076: light-harvesting complex2.26E-02
47GO:0005875: microtubule associated complex2.44E-02
48GO:0009532: plastid stroma3.01E-02
49GO:0022625: cytosolic large ribosomal subunit4.39E-02
50GO:0009522: photosystem I4.51E-02
Gene type



Gene DE type