co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G74680

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
2	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
3	GO:0033317: pantothenate biosynthetic process from valine	0.00E+00
4	GO:0070070: proton-transporting V-type ATPase complex assembly	0.00E+00
5	GO:0009768: photosynthesis, light harvesting in photosystem I	1.46E-23
6	GO:0018298: protein-chromophore linkage	2.77E-15
7	GO:0015979: photosynthesis	4.30E-14
8	GO:0009645: response to low light intensity stimulus	1.13E-10
9	GO:0009644: response to high light intensity	2.54E-08
10	GO:0009769: photosynthesis, light harvesting in photosystem II	4.85E-08
11	GO:0010218: response to far red light	5.17E-07
12	GO:0009637: response to blue light	7.09E-07
13	GO:0010114: response to red light	1.26E-06
14	GO:0015812: gamma-aminobutyric acid transport	4.45E-05
15	GO:0030259: lipid glycosylation	1.10E-04
16	GO:1902448: positive regulation of shade avoidance	1.89E-04
17	GO:0015940: pantothenate biosynthetic process	1.89E-04
18	GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly	2.78E-04
19	GO:0009416: response to light stimulus	3.11E-04
20	GO:2000306: positive regulation of photomorphogenesis	3.73E-04
21	GO:0030104: water homeostasis	3.73E-04
22	GO:0009765: photosynthesis, light harvesting	3.73E-04
23	GO:0045962: positive regulation of development, heterochronic	5.82E-04
24	GO:0007035: vacuolar acidification	5.82E-04
25	GO:0009635: response to herbicide	5.82E-04
26	GO:0080167: response to karrikin	6.28E-04
27	GO:0071333: cellular response to glucose stimulus	6.94E-04
28	GO:0010196: nonphotochemical quenching	8.11E-04
29	GO:0008643: carbohydrate transport	8.93E-04
30	GO:0090333: regulation of stomatal closure	1.19E-03
31	GO:0030042: actin filament depolymerization	1.32E-03
32	GO:0009409: response to cold	1.44E-03
33	GO:0010629: negative regulation of gene expression	1.47E-03
34	GO:0018119: peptidyl-cysteine S-nitrosylation	1.61E-03
35	GO:0009767: photosynthetic electron transport chain	1.92E-03
36	GO:0010207: photosystem II assembly	2.09E-03
37	GO:0007015: actin filament organization	2.09E-03
38	GO:0090351: seedling development	2.25E-03
39	GO:0009269: response to desiccation	2.96E-03
40	GO:0003333: amino acid transmembrane transport	2.96E-03
41	GO:0048511: rhythmic process	2.96E-03
42	GO:0071215: cellular response to abscisic acid stimulus	3.33E-03
43	GO:0045492: xylan biosynthetic process	3.53E-03
44	GO:0015991: ATP hydrolysis coupled proton transport	3.93E-03
45	GO:0015986: ATP synthesis coupled proton transport	4.35E-03
46	GO:1901657: glycosyl compound metabolic process	5.22E-03
47	GO:0016579: protein deubiquitination	5.91E-03
48	GO:0048573: photoperiodism, flowering	6.89E-03
49	GO:0006950: response to stress	6.89E-03
50	GO:0048481: plant ovule development	7.39E-03
51	GO:0010119: regulation of stomatal movement	8.18E-03
52	GO:0007568: aging	8.18E-03
53	GO:0009640: photomorphogenesis	1.04E-02
54	GO:0009965: leaf morphogenesis	1.13E-02
55	GO:0009735: response to cytokinin	1.20E-02
56	GO:0009058: biosynthetic process	2.01E-02
57	GO:0010228: vegetative to reproductive phase transition of meristem	2.51E-02
58	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.63E-02
59	GO:0048366: leaf development	3.73E-02
60	GO:0010200: response to chitin	3.96E-02
61	GO:0016192: vesicle-mediated transport	4.01E-02
62	GO:0005975: carbohydrate metabolic process	4.03E-02
63	GO:0044550: secondary metabolite biosynthetic process	4.11E-02
64	GO:0006886: intracellular protein transport	4.50E-02
65	GO:0032259: methylation	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0004567: beta-mannosidase activity	0.00E+00
2	GO:0080082: esculin beta-glucosidase activity	0.00E+00
3	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
4	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
5	GO:0050511: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity	0.00E+00
6	GO:0004592: pantoate-beta-alanine ligase activity	0.00E+00
7	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
8	GO:0031409: pigment binding	2.38E-21
9	GO:0016168: chlorophyll binding	5.51E-18
10	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	4.45E-05
11	GO:0080079: cellobiose glucosidase activity	4.45E-05
12	GO:0015180: L-alanine transmembrane transporter activity	1.10E-04
13	GO:0015181: arginine transmembrane transporter activity	2.78E-04
14	GO:0015189: L-lysine transmembrane transporter activity	2.78E-04
15	GO:0005313: L-glutamate transmembrane transporter activity	3.73E-04
16	GO:0051117: ATPase binding	5.82E-04
17	GO:0046961: proton-transporting ATPase activity, rotational mechanism	1.61E-03
18	GO:0004177: aminopeptidase activity	1.61E-03
19	GO:0047372: acylglycerol lipase activity	1.61E-03
20	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.97E-03
21	GO:0003712: transcription cofactor activity	2.25E-03
22	GO:0015297: antiporter activity	2.51E-03
23	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	2.96E-03
24	GO:0046872: metal ion binding	4.23E-03
25	GO:0004843: thiol-dependent ubiquitin-specific protease activity	4.77E-03
26	GO:0004497: monooxygenase activity	5.00E-03
27	GO:0102483: scopolin beta-glucosidase activity	6.89E-03
28	GO:0003993: acid phosphatase activity	8.99E-03
29	GO:0008422: beta-glucosidase activity	9.27E-03
30	GO:0005198: structural molecule activity	1.13E-02
31	GO:0016787: hydrolase activity	1.33E-02
32	GO:0015171: amino acid transmembrane transporter activity	1.38E-02
33	GO:0031625: ubiquitin protein ligase binding	1.38E-02
34	GO:0022857: transmembrane transporter activity	1.58E-02
35	GO:0003779: actin binding	1.61E-02
36	GO:0019825: oxygen binding	1.87E-02
37	GO:0005515: protein binding	2.41E-02
38	GO:0005506: iron ion binding	2.62E-02
39	GO:0008168: methyltransferase activity	3.23E-02
40	GO:0046982: protein heterodimerization activity	3.27E-02
41	GO:0008233: peptidase activity	3.82E-02
42	GO:0061630: ubiquitin protein ligase activity	4.01E-02
43	GO:0020037: heme binding	4.19E-02
44	GO:0042803: protein homodimerization activity	4.55E-02
45	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0009522: photosystem I	2.94E-19
2	GO:0030076: light-harvesting complex	6.92E-19
3	GO:0010287: plastoglobule	1.02E-16
4	GO:0009579: thylakoid	4.70E-15
5	GO:0009534: chloroplast thylakoid	4.99E-15
6	GO:0009535: chloroplast thylakoid membrane	4.96E-13
7	GO:0009523: photosystem II	6.85E-10
8	GO:0009941: chloroplast envelope	8.03E-10
9	GO:0016021: integral component of membrane	1.95E-07
10	GO:0042651: thylakoid membrane	1.82E-06
11	GO:0009517: PSII associated light-harvesting complex II	2.26E-06
12	GO:0009783: photosystem II antenna complex	4.45E-05
13	GO:0012510: trans-Golgi network transport vesicle membrane	4.45E-05
14	GO:0009507: chloroplast	6.18E-05
15	GO:0016020: membrane	1.49E-04
16	GO:0016471: vacuolar proton-transporting V-type ATPase complex	3.73E-04
17	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	4.75E-04
18	GO:0009533: chloroplast stromal thylakoid	8.11E-04
19	GO:0009538: photosystem I reaction center	9.32E-04
20	GO:0009543: chloroplast thylakoid lumen	1.92E-03
21	GO:0030095: chloroplast photosystem II	2.09E-03
22	GO:0009654: photosystem II oxygen evolving complex	2.77E-03
23	GO:0015629: actin cytoskeleton	3.33E-03
24	GO:0019898: extrinsic component of membrane	4.56E-03
25	GO:0000151: ubiquitin ligase complex	7.39E-03
26	GO:0000325: plant-type vacuole	8.18E-03
27	GO:0000786: nucleosome	8.44E-03
28	GO:0031977: thylakoid lumen	9.83E-03
29	GO:0031966: mitochondrial membrane	1.22E-02
30	GO:0005623: cell	1.97E-02
31	GO:0005802: trans-Golgi network	2.11E-02
32	GO:0005768: endosome	2.40E-02
33	GO:0005794: Golgi apparatus	2.43E-02
34	GO:0046658: anchored component of plasma membrane	2.97E-02