co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G73750

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
2	GO:0071474: cellular hyperosmotic response	0.00E+00
3	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
4	GO:0070584: mitochondrion morphogenesis	0.00E+00
5	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
6	GO:0070979: protein K11-linked ubiquitination	0.00E+00
7	GO:0015970: guanosine tetraphosphate biosynthetic process	0.00E+00
8	GO:1902171: regulation of tocopherol cyclase activity	0.00E+00
9	GO:0009877: nodulation	0.00E+00
10	GO:0046677: response to antibiotic	0.00E+00
11	GO:0090279: regulation of calcium ion import	0.00E+00
12	GO:0030644: cellular chloride ion homeostasis	0.00E+00
13	GO:0018298: protein-chromophore linkage	3.71E-07
14	GO:0009768: photosynthesis, light harvesting in photosystem I	4.93E-07
15	GO:0009645: response to low light intensity stimulus	8.22E-07
16	GO:0015979: photosynthesis	1.24E-06
17	GO:0010114: response to red light	1.41E-06
18	GO:0009644: response to high light intensity	1.73E-06
19	GO:0015995: chlorophyll biosynthetic process	9.99E-06
20	GO:0010218: response to far red light	1.52E-05
21	GO:0009637: response to blue light	2.02E-05
22	GO:0007623: circadian rhythm	2.88E-05
23	GO:0071470: cellular response to osmotic stress	5.74E-05
24	GO:0009416: response to light stimulus	1.41E-04
25	GO:0006475: internal protein amino acid acetylation	1.44E-04
26	GO:0006474: N-terminal protein amino acid acetylation	1.44E-04
27	GO:0017198: N-terminal peptidyl-serine acetylation	1.44E-04
28	GO:0080065: 4-alpha-methyl-delta7-sterol oxidation	1.44E-04
29	GO:0010362: negative regulation of anion channel activity by blue light	1.44E-04
30	GO:0018002: N-terminal peptidyl-glutamic acid acetylation	1.44E-04
31	GO:0000160: phosphorelay signal transduction system	2.43E-04
32	GO:0050992: dimethylallyl diphosphate biosynthetic process	3.29E-04
33	GO:0010155: regulation of proton transport	3.29E-04
34	GO:0071712: ER-associated misfolded protein catabolic process	3.29E-04
35	GO:0051262: protein tetramerization	3.29E-04
36	GO:0006883: cellular sodium ion homeostasis	3.29E-04
37	GO:0032527: protein exit from endoplasmic reticulum	3.29E-04
38	GO:0051170: nuclear import	3.29E-04
39	GO:1902884: positive regulation of response to oxidative stress	3.29E-04
40	GO:0009718: anthocyanin-containing compound biosynthetic process	3.34E-04
41	GO:0090153: regulation of sphingolipid biosynthetic process	5.40E-04
42	GO:1902448: positive regulation of shade avoidance	5.40E-04
43	GO:0032940: secretion by cell	5.40E-04
44	GO:0031145: anaphase-promoting complex-dependent catabolic process	5.40E-04
45	GO:1901562: response to paraquat	5.40E-04
46	GO:0048511: rhythmic process	6.31E-04
47	GO:0010017: red or far-red light signaling pathway	6.89E-04
48	GO:0009723: response to ethylene	7.19E-04
49	GO:0030071: regulation of mitotic metaphase/anaphase transition	7.73E-04
50	GO:1901000: regulation of response to salt stress	7.73E-04
51	GO:0044211: CTP salvage	7.73E-04
52	GO:0030100: regulation of endocytosis	7.73E-04
53	GO:0010023: proanthocyanidin biosynthetic process	1.02E-03
54	GO:0009765: photosynthesis, light harvesting	1.02E-03
55	GO:2000306: positive regulation of photomorphogenesis	1.02E-03
56	GO:0010600: regulation of auxin biosynthetic process	1.02E-03
57	GO:1901002: positive regulation of response to salt stress	1.02E-03
58	GO:0015846: polyamine transport	1.02E-03
59	GO:0044206: UMP salvage	1.02E-03
60	GO:0030104: water homeostasis	1.02E-03
61	GO:0009409: response to cold	1.16E-03
62	GO:0009904: chloroplast accumulation movement	1.29E-03
63	GO:0006461: protein complex assembly	1.29E-03
64	GO:0016123: xanthophyll biosynthetic process	1.29E-03
65	GO:0032876: negative regulation of DNA endoreduplication	1.29E-03
66	GO:0043097: pyrimidine nucleoside salvage	1.29E-03
67	GO:0006629: lipid metabolic process	1.43E-03
68	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.59E-03
69	GO:0045962: positive regulation of development, heterochronic	1.59E-03
70	GO:0006206: pyrimidine nucleobase metabolic process	1.59E-03
71	GO:0000060: protein import into nucleus, translocation	1.59E-03
72	GO:0006351: transcription, DNA-templated	1.68E-03
73	GO:0009903: chloroplast avoidance movement	1.91E-03
74	GO:0010077: maintenance of inflorescence meristem identity	1.91E-03
75	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.91E-03
76	GO:0010161: red light signaling pathway	2.24E-03
77	GO:0009769: photosynthesis, light harvesting in photosystem II	2.24E-03
78	GO:0009739: response to gibberellin	2.25E-03
79	GO:0055114: oxidation-reduction process	2.32E-03
80	GO:0009704: de-etiolation	2.60E-03
81	GO:0032875: regulation of DNA endoreduplication	2.60E-03
82	GO:0050821: protein stabilization	2.60E-03
83	GO:0010928: regulation of auxin mediated signaling pathway	2.60E-03
84	GO:0070413: trehalose metabolism in response to stress	2.60E-03
85	GO:0010099: regulation of photomorphogenesis	2.96E-03
86	GO:0009827: plant-type cell wall modification	2.96E-03
87	GO:0007186: G-protein coupled receptor signaling pathway	2.96E-03
88	GO:0090333: regulation of stomatal closure	3.35E-03
89	GO:0006970: response to osmotic stress	3.72E-03
90	GO:0009640: photomorphogenesis	3.75E-03
91	GO:0008356: asymmetric cell division	3.76E-03
92	GO:0006355: regulation of transcription, DNA-templated	3.76E-03
93	GO:0009638: phototropism	3.76E-03
94	GO:0048354: mucilage biosynthetic process involved in seed coat development	3.76E-03
95	GO:0042761: very long-chain fatty acid biosynthetic process	3.76E-03
96	GO:0009688: abscisic acid biosynthetic process	4.18E-03
97	GO:0009641: shade avoidance	4.18E-03
98	GO:0006535: cysteine biosynthetic process from serine	4.18E-03
99	GO:0080167: response to karrikin	4.45E-03
100	GO:0030148: sphingolipid biosynthetic process	4.61E-03
101	GO:0046856: phosphatidylinositol dephosphorylation	4.61E-03
102	GO:0044550: secondary metabolite biosynthetic process	4.95E-03
103	GO:0050826: response to freezing	5.52E-03
104	GO:0018107: peptidyl-threonine phosphorylation	5.52E-03
105	GO:0009785: blue light signaling pathway	5.52E-03
106	GO:0009266: response to temperature stimulus	6.00E-03
107	GO:0090351: seedling development	6.50E-03
108	GO:0009651: response to salt stress	6.91E-03
109	GO:0006636: unsaturated fatty acid biosynthetic process	7.00E-03
110	GO:0009408: response to heat	7.30E-03
111	GO:0005992: trehalose biosynthetic process	7.52E-03
112	GO:0019344: cysteine biosynthetic process	7.52E-03
113	GO:0006874: cellular calcium ion homeostasis	8.06E-03
114	GO:0003333: amino acid transmembrane transport	8.61E-03
115	GO:0010431: seed maturation	8.61E-03
116	GO:0009269: response to desiccation	8.61E-03
117	GO:0009737: response to abscisic acid	9.58E-03
118	GO:0009414: response to water deprivation	9.60E-03
119	GO:0071215: cellular response to abscisic acid stimulus	9.75E-03
120	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.09E-02
121	GO:0070417: cellular response to cold	1.09E-02
122	GO:0010087: phloem or xylem histogenesis	1.16E-02
123	GO:0010182: sugar mediated signaling pathway	1.22E-02
124	GO:0006814: sodium ion transport	1.28E-02
125	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.39E-02
126	GO:1901657: glycosyl compound metabolic process	1.55E-02
127	GO:0035556: intracellular signal transduction	1.62E-02
128	GO:0010286: heat acclimation	1.69E-02
129	GO:0016126: sterol biosynthetic process	1.84E-02
130	GO:0009911: positive regulation of flower development	1.84E-02
131	GO:0010029: regulation of seed germination	1.91E-02
132	GO:0009658: chloroplast organization	1.93E-02
133	GO:0048573: photoperiodism, flowering	2.06E-02
134	GO:0006811: ion transport	2.38E-02
135	GO:0007568: aging	2.46E-02
136	GO:0009631: cold acclimation	2.46E-02
137	GO:0010119: regulation of stomatal movement	2.46E-02
138	GO:0006865: amino acid transport	2.54E-02
139	GO:0046777: protein autophosphorylation	2.56E-02
140	GO:0034599: cellular response to oxidative stress	2.71E-02
141	GO:0045892: negative regulation of transcription, DNA-templated	2.91E-02
142	GO:0051707: response to other organism	3.15E-02
143	GO:0008283: cell proliferation	3.15E-02
144	GO:0009965: leaf morphogenesis	3.42E-02
145	GO:0000165: MAPK cascade	3.60E-02
146	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.60E-02
147	GO:0006812: cation transport	3.70E-02
148	GO:0042538: hyperosmotic salinity response	3.70E-02
149	GO:0016310: phosphorylation	3.78E-02
150	GO:0009585: red, far-red light phototransduction	3.89E-02
151	GO:0006857: oligopeptide transport	4.08E-02
152	GO:0009909: regulation of flower development	4.18E-02
153	GO:0043086: negative regulation of catalytic activity	4.38E-02
154	GO:0009624: response to nematode	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	0.00E+00
2	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
3	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
4	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
5	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
6	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
7	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
8	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
9	GO:0004567: beta-mannosidase activity	0.00E+00
10	GO:0080082: esculin beta-glucosidase activity	0.00E+00
11	GO:0031409: pigment binding	3.04E-07
12	GO:0016168: chlorophyll binding	7.94E-06
13	GO:0005227: calcium activated cation channel activity	1.44E-04
14	GO:0080079: cellobiose glucosidase activity	1.44E-04
15	GO:1990189: peptide-serine-N-acetyltransferase activity	1.44E-04
16	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.44E-04
17	GO:1990190: peptide-glutamate-N-acetyltransferase activity	1.44E-04
18	GO:0052631: sphingolipid delta-8 desaturase activity	1.44E-04
19	GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	1.44E-04
20	GO:0008158: hedgehog receptor activity	1.44E-04
21	GO:0008728: GTP diphosphokinase activity	3.29E-04
22	GO:0050017: L-3-cyanoalanine synthase activity	3.29E-04
23	GO:0004103: choline kinase activity	3.29E-04
24	GO:0080045: quercetin 3'-O-glucosyltransferase activity	3.29E-04
25	GO:0044390: ubiquitin-like protein conjugating enzyme binding	3.29E-04
26	GO:0016630: protochlorophyllide reductase activity	3.29E-04
27	GO:0010277: chlorophyllide a oxygenase [overall] activity	5.40E-04
28	GO:0009882: blue light photoreceptor activity	7.73E-04
29	GO:0000254: C-4 methylsterol oxidase activity	7.73E-04
30	GO:0015203: polyamine transmembrane transporter activity	7.73E-04
31	GO:0046872: metal ion binding	7.93E-04
32	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	1.02E-03
33	GO:0004845: uracil phosphoribosyltransferase activity	1.02E-03
34	GO:0004930: G-protein coupled receptor activity	1.02E-03
35	GO:0051538: 3 iron, 4 sulfur cluster binding	1.29E-03
36	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.29E-03
37	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.34E-03
38	GO:0000156: phosphorelay response regulator activity	1.41E-03
39	GO:0080046: quercetin 4'-O-glucosyltransferase activity	1.59E-03
40	GO:0004462: lactoylglutathione lyase activity	1.59E-03
41	GO:0004124: cysteine synthase activity	1.91E-03
42	GO:0005261: cation channel activity	1.91E-03
43	GO:0004849: uridine kinase activity	1.91E-03
44	GO:0004602: glutathione peroxidase activity	1.91E-03
45	GO:0005506: iron ion binding	2.49E-03
46	GO:0003677: DNA binding	2.73E-03
47	GO:0016787: hydrolase activity	2.87E-03
48	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	2.96E-03
49	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.31E-03
50	GO:0071949: FAD binding	3.35E-03
51	GO:0000989: transcription factor activity, transcription factor binding	3.35E-03
52	GO:0015174: basic amino acid transmembrane transporter activity	3.76E-03
53	GO:0051537: 2 iron, 2 sulfur cluster binding	4.06E-03
54	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	4.18E-03
55	GO:0015293: symporter activity	4.22E-03
56	GO:0047372: acylglycerol lipase activity	4.61E-03
57	GO:0061630: ubiquitin protein ligase activity	4.74E-03
58	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	5.06E-03
59	GO:0005315: inorganic phosphate transmembrane transporter activity	5.52E-03
60	GO:0000155: phosphorelay sensor kinase activity	5.52E-03
61	GO:0004565: beta-galactosidase activity	5.52E-03
62	GO:0004022: alcohol dehydrogenase (NAD) activity	5.52E-03
63	GO:0004190: aspartic-type endopeptidase activity	6.50E-03
64	GO:0005217: intracellular ligand-gated ion channel activity	6.50E-03
65	GO:0003712: transcription cofactor activity	6.50E-03
66	GO:0004970: ionotropic glutamate receptor activity	6.50E-03
67	GO:0008270: zinc ion binding	6.88E-03
68	GO:0008134: transcription factor binding	7.52E-03
69	GO:0005216: ion channel activity	8.06E-03
70	GO:0016829: lyase activity	9.73E-03
71	GO:0008514: organic anion transmembrane transporter activity	1.03E-02
72	GO:0015297: antiporter activity	1.19E-02
73	GO:0008080: N-acetyltransferase activity	1.22E-02
74	GO:0010181: FMN binding	1.28E-02
75	GO:0016791: phosphatase activity	1.62E-02
76	GO:0004672: protein kinase activity	1.78E-02
77	GO:0102483: scopolin beta-glucosidase activity	2.06E-02
78	GO:0004497: monooxygenase activity	2.39E-02
79	GO:0008422: beta-glucosidase activity	2.80E-02
80	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.09E-02
81	GO:0005515: protein binding	3.62E-02
82	GO:0004674: protein serine/threonine kinase activity	3.96E-02
83	GO:0016298: lipase activity	3.98E-02
84	GO:0005215: transporter activity	4.14E-02
85	GO:0015171: amino acid transmembrane transporter activity	4.18E-02
86	GO:0031625: ubiquitin protein ligase binding	4.18E-02
87	GO:0045735: nutrient reservoir activity	4.38E-02
88	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.68E-02
89	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.68E-02
90	GO:0016874: ligase activity	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0009941: chloroplast envelope	1.39E-08
2	GO:0009535: chloroplast thylakoid membrane	1.24E-07
3	GO:0010287: plastoglobule	5.53E-07
4	GO:0009522: photosystem I	2.29E-06
5	GO:0009534: chloroplast thylakoid	3.52E-06
6	GO:0030076: light-harvesting complex	1.52E-05
7	GO:0009898: cytoplasmic side of plasma membrane	1.67E-05
8	GO:0009523: photosystem II	8.23E-05
9	GO:0009507: chloroplast	1.14E-04
10	GO:0009579: thylakoid	2.12E-04
11	GO:0031415: NatA complex	3.29E-04
12	GO:0036513: Derlin-1 retrotranslocation complex	7.73E-04
13	GO:0009517: PSII associated light-harvesting complex II	1.02E-03
14	GO:0030660: Golgi-associated vesicle membrane	1.02E-03
15	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.02E-03
16	GO:0005798: Golgi-associated vesicle	1.59E-03
17	GO:0009986: cell surface	2.24E-03
18	GO:0009538: photosystem I reaction center	2.60E-03
19	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.60E-03
20	GO:0005680: anaphase-promoting complex	3.35E-03
21	GO:0016021: integral component of membrane	3.52E-03
22	GO:0016604: nuclear body	3.76E-03
23	GO:0005765: lysosomal membrane	4.61E-03
24	GO:0016020: membrane	6.47E-03
25	GO:0005769: early endosome	7.00E-03
26	GO:0009706: chloroplast inner membrane	7.18E-03
27	GO:0042651: thylakoid membrane	8.06E-03
28	GO:0009707: chloroplast outer membrane	2.22E-02
29	GO:0031969: chloroplast membrane	2.39E-02
30	GO:0009570: chloroplast stroma	2.50E-02
31	GO:0005783: endoplasmic reticulum	2.81E-02
32	GO:0016607: nuclear speck	4.48E-02
33	GO:0010008: endosome membrane	4.48E-02