co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G72890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006482: protein demethylation	0.00E+00
2	GO:0070328: triglyceride homeostasis	0.00E+00
3	GO:0055091: phospholipid homeostasis	0.00E+00
4	GO:0030149: sphingolipid catabolic process	0.00E+00
5	GO:0009398: FMN biosynthetic process	0.00E+00
6	GO:0006511: ubiquitin-dependent protein catabolic process	9.03E-05
7	GO:0006481: C-terminal protein methylation	1.00E-04
8	GO:0033306: phytol metabolic process	1.00E-04
9	GO:0034214: protein hexamerization	1.00E-04
10	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	1.00E-04
11	GO:0015824: proline transport	2.36E-04
12	GO:0055088: lipid homeostasis	2.36E-04
13	GO:0019374: galactolipid metabolic process	2.36E-04
14	GO:0019752: carboxylic acid metabolic process	2.36E-04
15	GO:0097054: L-glutamate biosynthetic process	2.36E-04
16	GO:0009156: ribonucleoside monophosphate biosynthetic process	2.36E-04
17	GO:0006825: copper ion transport	3.58E-04
18	GO:0010476: gibberellin mediated signaling pathway	3.92E-04
19	GO:0010325: raffinose family oligosaccharide biosynthetic process	3.92E-04
20	GO:0009410: response to xenobiotic stimulus	3.92E-04
21	GO:0010447: response to acidic pH	3.92E-04
22	GO:0034051: negative regulation of plant-type hypersensitive response	3.92E-04
23	GO:0006537: glutamate biosynthetic process	5.64E-04
24	GO:0001676: long-chain fatty acid metabolic process	5.64E-04
25	GO:0055089: fatty acid homeostasis	5.64E-04
26	GO:0019438: aromatic compound biosynthetic process	5.64E-04
27	GO:0019676: ammonia assimilation cycle	7.50E-04
28	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	7.50E-04
29	GO:0009165: nucleotide biosynthetic process	7.50E-04
30	GO:0009247: glycolipid biosynthetic process	9.47E-04
31	GO:0010337: regulation of salicylic acid metabolic process	1.16E-03
32	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.16E-03
33	GO:0000911: cytokinesis by cell plate formation	1.38E-03
34	GO:0009612: response to mechanical stimulus	1.38E-03
35	GO:0048444: floral organ morphogenesis	1.38E-03
36	GO:0006955: immune response	1.62E-03
37	GO:0070370: cellular heat acclimation	1.62E-03
38	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.62E-03
39	GO:0010044: response to aluminum ion	1.62E-03
40	GO:0006605: protein targeting	1.87E-03
41	GO:0019375: galactolipid biosynthetic process	1.87E-03
42	GO:0009231: riboflavin biosynthetic process	1.87E-03
43	GO:0006631: fatty acid metabolic process	2.14E-03
44	GO:0009657: plastid organization	2.14E-03
45	GO:0010262: somatic embryogenesis	2.14E-03
46	GO:0051707: response to other organism	2.32E-03
47	GO:0009051: pentose-phosphate shunt, oxidative branch	2.41E-03
48	GO:0019432: triglyceride biosynthetic process	2.41E-03
49	GO:0046916: cellular transition metal ion homeostasis	2.41E-03
50	GO:0009056: catabolic process	2.41E-03
51	GO:0030042: actin filament depolymerization	2.70E-03
52	GO:0006896: Golgi to vacuole transport	3.00E-03
53	GO:0019538: protein metabolic process	3.00E-03
54	GO:0006032: chitin catabolic process	3.00E-03
55	GO:0045454: cell redox homeostasis	3.01E-03
56	GO:0015770: sucrose transport	3.31E-03
57	GO:0000272: polysaccharide catabolic process	3.31E-03
58	GO:0009626: plant-type hypersensitive response	3.91E-03
59	GO:0006006: glucose metabolic process	3.95E-03
60	GO:0009266: response to temperature stimulus	4.30E-03
61	GO:0034605: cellular response to heat	4.30E-03
62	GO:0007034: vacuolar transport	4.30E-03
63	GO:0046688: response to copper ion	4.64E-03
64	GO:0009833: plant-type primary cell wall biogenesis	5.00E-03
65	GO:0009116: nucleoside metabolic process	5.37E-03
66	GO:0009863: salicylic acid mediated signaling pathway	5.37E-03
67	GO:0009695: jasmonic acid biosynthetic process	5.75E-03
68	GO:0031408: oxylipin biosynthetic process	6.14E-03
69	GO:0016998: cell wall macromolecule catabolic process	6.14E-03
70	GO:0035428: hexose transmembrane transport	6.54E-03
71	GO:0009814: defense response, incompatible interaction	6.54E-03
72	GO:0030433: ubiquitin-dependent ERAD pathway	6.54E-03
73	GO:0055114: oxidation-reduction process	6.75E-03
74	GO:0019722: calcium-mediated signaling	7.35E-03
75	GO:0010091: trichome branching	7.35E-03
76	GO:0016117: carotenoid biosynthetic process	7.78E-03
77	GO:0000271: polysaccharide biosynthetic process	8.21E-03
78	GO:0006520: cellular amino acid metabolic process	8.65E-03
79	GO:0046323: glucose import	8.65E-03
80	GO:0009617: response to bacterium	9.09E-03
81	GO:0061025: membrane fusion	9.10E-03
82	GO:0046686: response to cadmium ion	9.25E-03
83	GO:0006623: protein targeting to vacuole	9.56E-03
84	GO:0008654: phospholipid biosynthetic process	9.56E-03
85	GO:0010193: response to ozone	1.00E-02
86	GO:0030163: protein catabolic process	1.10E-02
87	GO:0006464: cellular protein modification process	1.15E-02
88	GO:0016579: protein deubiquitination	1.25E-02
89	GO:0006468: protein phosphorylation	1.33E-02
90	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.35E-02
91	GO:0009816: defense response to bacterium, incompatible interaction	1.35E-02
92	GO:0006950: response to stress	1.46E-02
93	GO:0046777: protein autophosphorylation	1.57E-02
94	GO:0030244: cellulose biosynthetic process	1.57E-02
95	GO:0008219: cell death	1.57E-02
96	GO:0044550: secondary metabolite biosynthetic process	1.59E-02
97	GO:0010043: response to zinc ion	1.74E-02
98	GO:0006865: amino acid transport	1.80E-02
99	GO:0030001: metal ion transport	2.03E-02
100	GO:0000209: protein polyubiquitination	2.29E-02
101	GO:0009644: response to high light intensity	2.35E-02
102	GO:0008643: carbohydrate transport	2.35E-02
103	GO:0008152: metabolic process	2.39E-02
104	GO:0031347: regulation of defense response	2.55E-02
105	GO:0051603: proteolysis involved in cellular protein catabolic process	2.81E-02
106	GO:0009651: response to salt stress	2.91E-02
107	GO:0006417: regulation of translation	2.95E-02
108	GO:0048367: shoot system development	3.17E-02
109	GO:0018105: peptidyl-serine phosphorylation	3.61E-02
110	GO:0009738: abscisic acid-activated signaling pathway	3.72E-02
111	GO:0000398: mRNA splicing, via spliceosome	3.91E-02
112	GO:0006413: translational initiation	4.95E-02
113	GO:0016036: cellular response to phosphate starvation	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0008531: riboflavin kinase activity	0.00E+00
2	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
3	GO:0009940: amino-terminal vacuolar sorting propeptide binding	0.00E+00
4	GO:0015930: glutamate synthase activity	0.00E+00
5	GO:0042171: lysophosphatidic acid acyltransferase activity	0.00E+00
6	GO:0051723: protein methylesterase activity	0.00E+00
7	GO:0010209: vacuolar sorting signal binding	1.00E-04
8	GO:0004321: fatty-acyl-CoA synthase activity	1.00E-04
9	GO:0016041: glutamate synthase (ferredoxin) activity	1.00E-04
10	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.00E-04
11	GO:0008171: O-methyltransferase activity	1.30E-04
12	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	2.36E-04
13	GO:0003919: FMN adenylyltransferase activity	2.36E-04
14	GO:0010331: gibberellin binding	2.36E-04
15	GO:0016531: copper chaperone activity	3.92E-04
16	GO:0015193: L-proline transmembrane transporter activity	3.92E-04
17	GO:0004298: threonine-type endopeptidase activity	3.94E-04
18	GO:0004749: ribose phosphate diphosphokinase activity	5.64E-04
19	GO:0008276: protein methyltransferase activity	5.64E-04
20	GO:0004345: glucose-6-phosphate dehydrogenase activity	7.50E-04
21	GO:0009916: alternative oxidase activity	7.50E-04
22	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	7.50E-04
23	GO:0015145: monosaccharide transmembrane transporter activity	9.47E-04
24	GO:0004623: phospholipase A2 activity	9.47E-04
25	GO:0031386: protein tag	9.47E-04
26	GO:0051538: 3 iron, 4 sulfur cluster binding	9.47E-04
27	GO:0005524: ATP binding	1.07E-03
28	GO:0016787: hydrolase activity	1.08E-03
29	GO:0036402: proteasome-activating ATPase activity	1.16E-03
30	GO:0051920: peroxiredoxin activity	1.38E-03
31	GO:0102391: decanoate--CoA ligase activity	1.38E-03
32	GO:0004144: diacylglycerol O-acyltransferase activity	1.38E-03
33	GO:0016831: carboxy-lyase activity	1.62E-03
34	GO:0008506: sucrose:proton symporter activity	1.62E-03
35	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.62E-03
36	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.62E-03
37	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.62E-03
38	GO:0004467: long-chain fatty acid-CoA ligase activity	1.62E-03
39	GO:0016209: antioxidant activity	1.87E-03
40	GO:0047893: flavonol 3-O-glucosyltransferase activity	1.87E-03
41	GO:0046914: transition metal ion binding	2.14E-03
42	GO:0016207: 4-coumarate-CoA ligase activity	2.41E-03
43	GO:0071949: FAD binding	2.41E-03
44	GO:0004568: chitinase activity	3.00E-03
45	GO:0005516: calmodulin binding	3.01E-03
46	GO:0008794: arsenate reductase (glutaredoxin) activity	3.31E-03
47	GO:0017025: TBP-class protein binding	4.64E-03
48	GO:0008061: chitin binding	4.64E-03
49	GO:0004674: protein serine/threonine kinase activity	5.55E-03
50	GO:0035251: UDP-glucosyltransferase activity	6.14E-03
51	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	6.14E-03
52	GO:0016887: ATPase activity	6.83E-03
53	GO:0022891: substrate-specific transmembrane transporter activity	6.94E-03
54	GO:0016760: cellulose synthase (UDP-forming) activity	6.94E-03
55	GO:0008194: UDP-glycosyltransferase activity	8.52E-03
56	GO:0005355: glucose transmembrane transporter activity	9.10E-03
57	GO:0019901: protein kinase binding	9.56E-03
58	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.00E-02
59	GO:0016759: cellulose synthase activity	1.15E-02
60	GO:0000287: magnesium ion binding	1.16E-02
61	GO:0008237: metallopeptidase activity	1.20E-02
62	GO:0005515: protein binding	1.34E-02
63	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.40E-02
64	GO:0008233: peptidase activity	1.44E-02
65	GO:0004806: triglyceride lipase activity	1.46E-02
66	GO:0004683: calmodulin-dependent protein kinase activity	1.46E-02
67	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.51E-02
68	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.74E-02
69	GO:0005509: calcium ion binding	1.79E-02
70	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.97E-02
71	GO:0050661: NADP binding	2.03E-02
72	GO:0005484: SNAP receptor activity	2.22E-02
73	GO:0009055: electron carrier activity	2.33E-02
74	GO:0016301: kinase activity	2.36E-02
75	GO:0005198: structural molecule activity	2.41E-02
76	GO:0016298: lipase activity	2.81E-02
77	GO:0015171: amino acid transmembrane transporter activity	2.95E-02
78	GO:0031625: ubiquitin protein ligase binding	2.95E-02
79	GO:0004672: protein kinase activity	3.21E-02
80	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.31E-02
81	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.31E-02
82	GO:0016874: ligase activity	3.38E-02
83	GO:0003779: actin binding	3.46E-02
84	GO:0015035: protein disulfide oxidoreductase activity	3.61E-02
85	GO:0016746: transferase activity, transferring acyl groups	3.61E-02
86	GO:0016758: transferase activity, transferring hexosyl groups	4.06E-02
87	GO:0030170: pyridoxal phosphate binding	4.46E-02
88	GO:0016740: transferase activity	4.67E-02
89	GO:0015144: carbohydrate transmembrane transporter activity	4.70E-02
90	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0046862: chromoplast membrane	0.00E+00
2	GO:0000502: proteasome complex	8.62E-07
3	GO:0005886: plasma membrane	2.24E-04
4	GO:0030139: endocytic vesicle	3.92E-04
5	GO:0005839: proteasome core complex	3.94E-04
6	GO:0032585: multivesicular body membrane	5.64E-04
7	GO:0005829: cytosol	6.78E-04
8	GO:0005623: cell	7.36E-04
9	GO:0031597: cytosolic proteasome complex	1.38E-03
10	GO:0031595: nuclear proteasome complex	1.62E-03
11	GO:0019773: proteasome core complex, alpha-subunit complex	2.14E-03
12	GO:0031901: early endosome membrane	2.41E-03
13	GO:0030665: clathrin-coated vesicle membrane	2.70E-03
14	GO:0008540: proteasome regulatory particle, base subcomplex	2.70E-03
15	GO:0017119: Golgi transport complex	3.00E-03
16	GO:0008541: proteasome regulatory particle, lid subcomplex	3.31E-03
17	GO:0005783: endoplasmic reticulum	3.66E-03
18	GO:0005750: mitochondrial respiratory chain complex III	4.30E-03
19	GO:0005769: early endosome	5.00E-03
20	GO:0005758: mitochondrial intermembrane space	5.37E-03
21	GO:0070469: respiratory chain	5.75E-03
22	GO:0015629: actin cytoskeleton	6.94E-03
23	GO:0005770: late endosome	8.65E-03
24	GO:0009504: cell plate	9.56E-03
25	GO:0000785: chromatin	1.05E-02
26	GO:0009707: chloroplast outer membrane	1.57E-02
27	GO:0005622: intracellular	1.68E-02
28	GO:0031902: late endosome membrane	2.10E-02
29	GO:0009536: plastid	2.57E-02
30	GO:0031966: mitochondrial membrane	2.61E-02
31	GO:0005887: integral component of plasma membrane	2.94E-02
32	GO:0005789: endoplasmic reticulum membrane	3.37E-02
33	GO:0005737: cytoplasm	3.55E-02
34	GO:0010287: plastoglobule	3.99E-02
35	GO:0005777: peroxisome	4.40E-02