co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G72830

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019484: beta-alanine catabolic process	0.00E+00
2	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
3	GO:0033587: shikimate biosynthetic process	0.00E+00
4	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
5	GO:0006182: cGMP biosynthetic process	0.00E+00
6	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
7	GO:0006592: ornithine biosynthetic process	0.00E+00
8	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
9	GO:0006105: succinate metabolic process	0.00E+00
10	GO:0009617: response to bacterium	1.79E-07
11	GO:0046686: response to cadmium ion	2.31E-07
12	GO:0010150: leaf senescence	1.51E-06
13	GO:0071456: cellular response to hypoxia	4.83E-06
14	GO:0010120: camalexin biosynthetic process	8.03E-06
15	GO:0009399: nitrogen fixation	2.55E-05
16	GO:0008219: cell death	6.49E-05
17	GO:0000304: response to singlet oxygen	7.32E-05
18	GO:1901183: positive regulation of camalexin biosynthetic process	2.60E-04
19	GO:0009865: pollen tube adhesion	2.60E-04
20	GO:0006540: glutamate decarboxylation to succinate	2.60E-04
21	GO:0042759: long-chain fatty acid biosynthetic process	2.60E-04
22	GO:0046167: glycerol-3-phosphate biosynthetic process	2.60E-04
23	GO:0035266: meristem growth	2.60E-04
24	GO:0009450: gamma-aminobutyric acid catabolic process	2.60E-04
25	GO:0007292: female gamete generation	2.60E-04
26	GO:1990641: response to iron ion starvation	2.60E-04
27	GO:0042742: defense response to bacterium	2.79E-04
28	GO:0006468: protein phosphorylation	4.43E-04
29	GO:0048829: root cap development	5.06E-04
30	GO:0051258: protein polymerization	5.74E-04
31	GO:0060919: auxin influx	5.74E-04
32	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.74E-04
33	GO:0007154: cell communication	5.74E-04
34	GO:0042325: regulation of phosphorylation	5.74E-04
35	GO:0019441: tryptophan catabolic process to kynurenine	5.74E-04
36	GO:0097054: L-glutamate biosynthetic process	5.74E-04
37	GO:0034243: regulation of transcription elongation from RNA polymerase II promoter	5.74E-04
38	GO:0010033: response to organic substance	5.74E-04
39	GO:0006641: triglyceride metabolic process	5.74E-04
40	GO:0051788: response to misfolded protein	5.74E-04
41	GO:0006101: citrate metabolic process	5.74E-04
42	GO:0009682: induced systemic resistance	5.84E-04
43	GO:0009817: defense response to fungus, incompatible interaction	6.75E-04
44	GO:0002237: response to molecule of bacterial origin	8.52E-04
45	GO:0019563: glycerol catabolic process	9.31E-04
46	GO:0080055: low-affinity nitrate transport	9.31E-04
47	GO:0060968: regulation of gene silencing	9.31E-04
48	GO:0032786: positive regulation of DNA-templated transcription, elongation	9.31E-04
49	GO:0000162: tryptophan biosynthetic process	1.05E-03
50	GO:0046513: ceramide biosynthetic process	1.33E-03
51	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.33E-03
52	GO:0048194: Golgi vesicle budding	1.33E-03
53	GO:0006020: inositol metabolic process	1.33E-03
54	GO:0072334: UDP-galactose transmembrane transport	1.33E-03
55	GO:0006072: glycerol-3-phosphate metabolic process	1.33E-03
56	GO:0006537: glutamate biosynthetic process	1.33E-03
57	GO:0010188: response to microbial phytotoxin	1.78E-03
58	GO:0080142: regulation of salicylic acid biosynthetic process	1.78E-03
59	GO:0006542: glutamine biosynthetic process	1.78E-03
60	GO:0019676: ammonia assimilation cycle	1.78E-03
61	GO:0006536: glutamate metabolic process	1.78E-03
62	GO:0005513: detection of calcium ion	2.27E-03
63	GO:0006097: glyoxylate cycle	2.27E-03
64	GO:0007029: endoplasmic reticulum organization	2.27E-03
65	GO:0009697: salicylic acid biosynthetic process	2.27E-03
66	GO:0009851: auxin biosynthetic process	2.64E-03
67	GO:0002238: response to molecule of fungal origin	2.80E-03
68	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.80E-03
69	GO:0006561: proline biosynthetic process	2.80E-03
70	GO:0048827: phyllome development	2.80E-03
71	GO:0048232: male gamete generation	2.80E-03
72	GO:0043248: proteasome assembly	2.80E-03
73	GO:0010315: auxin efflux	2.80E-03
74	GO:0080167: response to karrikin	2.86E-03
75	GO:0009630: gravitropism	3.02E-03
76	GO:0009612: response to mechanical stimulus	3.36E-03
77	GO:0098655: cation transmembrane transport	3.36E-03
78	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.36E-03
79	GO:0009567: double fertilization forming a zygote and endosperm	3.42E-03
80	GO:0010252: auxin homeostasis	3.42E-03
81	GO:1902074: response to salt	3.97E-03
82	GO:1900056: negative regulation of leaf senescence	3.97E-03
83	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.97E-03
84	GO:0009607: response to biotic stimulus	4.32E-03
85	GO:0042128: nitrate assimilation	4.56E-03
86	GO:0006605: protein targeting	4.60E-03
87	GO:0010078: maintenance of root meristem identity	4.60E-03
88	GO:0006102: isocitrate metabolic process	4.60E-03
89	GO:0009819: drought recovery	4.60E-03
90	GO:0030091: protein repair	4.60E-03
91	GO:0010262: somatic embryogenesis	5.27E-03
92	GO:0006526: arginine biosynthetic process	5.27E-03
93	GO:0010204: defense response signaling pathway, resistance gene-independent	5.27E-03
94	GO:0009808: lignin metabolic process	5.27E-03
95	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	5.27E-03
96	GO:0010311: lateral root formation	5.59E-03
97	GO:0010112: regulation of systemic acquired resistance	5.98E-03
98	GO:0007338: single fertilization	5.98E-03
99	GO:0006098: pentose-phosphate shunt	5.98E-03
100	GO:0009821: alkaloid biosynthetic process	5.98E-03
101	GO:0008202: steroid metabolic process	6.71E-03
102	GO:0071577: zinc II ion transmembrane transport	6.71E-03
103	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.71E-03
104	GO:0045087: innate immune response	6.74E-03
105	GO:0007166: cell surface receptor signaling pathway	6.74E-03
106	GO:0006952: defense response	6.83E-03
107	GO:0006099: tricarboxylic acid cycle	7.05E-03
108	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.47E-03
109	GO:0006535: cysteine biosynthetic process from serine	7.47E-03
110	GO:0009688: abscisic acid biosynthetic process	7.47E-03
111	GO:0043069: negative regulation of programmed cell death	7.47E-03
112	GO:0006325: chromatin organization	7.47E-03
113	GO:0007064: mitotic sister chromatid cohesion	7.47E-03
114	GO:0030148: sphingolipid biosynthetic process	8.27E-03
115	GO:0010015: root morphogenesis	8.27E-03
116	GO:0052544: defense response by callose deposition in cell wall	8.27E-03
117	GO:0009089: lysine biosynthetic process via diaminopimelate	8.27E-03
118	GO:0051707: response to other organism	8.70E-03
119	GO:0000266: mitochondrial fission	9.09E-03
120	GO:0015706: nitrate transport	9.09E-03
121	GO:0055114: oxidation-reduction process	9.42E-03
122	GO:0055046: microgametogenesis	9.94E-03
123	GO:0009718: anthocyanin-containing compound biosynthetic process	9.94E-03
124	GO:0009933: meristem structural organization	1.08E-02
125	GO:0010540: basipetal auxin transport	1.08E-02
126	GO:0006541: glutamine metabolic process	1.08E-02
127	GO:0006812: cation transport	1.09E-02
128	GO:0090351: seedling development	1.17E-02
129	GO:0010053: root epidermal cell differentiation	1.17E-02
130	GO:0010167: response to nitrate	1.17E-02
131	GO:0005985: sucrose metabolic process	1.17E-02
132	GO:0009809: lignin biosynthetic process	1.18E-02
133	GO:2000377: regulation of reactive oxygen species metabolic process	1.36E-02
134	GO:0005992: trehalose biosynthetic process	1.36E-02
135	GO:0019344: cysteine biosynthetic process	1.36E-02
136	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.36E-02
137	GO:0009733: response to auxin	1.38E-02
138	GO:0048367: shoot system development	1.44E-02
139	GO:0009626: plant-type hypersensitive response	1.48E-02
140	GO:0009620: response to fungus	1.53E-02
141	GO:0016998: cell wall macromolecule catabolic process	1.56E-02
142	GO:0031408: oxylipin biosynthetic process	1.56E-02
143	GO:0030433: ubiquitin-dependent ERAD pathway	1.67E-02
144	GO:0010227: floral organ abscission	1.77E-02
145	GO:0009561: megagametogenesis	1.88E-02
146	GO:0009306: protein secretion	1.88E-02
147	GO:0010584: pollen exine formation	1.88E-02
148	GO:0032259: methylation	2.02E-02
149	GO:0015991: ATP hydrolysis coupled proton transport	2.11E-02
150	GO:0006662: glycerol ether metabolic process	2.22E-02
151	GO:0008360: regulation of cell shape	2.22E-02
152	GO:0006885: regulation of pH	2.22E-02
153	GO:0010154: fruit development	2.22E-02
154	GO:0048364: root development	2.25E-02
155	GO:0009845: seed germination	2.28E-02
156	GO:0009749: response to glucose	2.46E-02
157	GO:0010183: pollen tube guidance	2.46E-02
158	GO:0000302: response to reactive oxygen species	2.58E-02
159	GO:0071554: cell wall organization or biogenesis	2.58E-02
160	GO:0010583: response to cyclopentenone	2.70E-02
161	GO:0006914: autophagy	2.96E-02
162	GO:0006904: vesicle docking involved in exocytosis	3.09E-02
163	GO:0051607: defense response to virus	3.22E-02
164	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.25E-02
165	GO:0009734: auxin-activated signaling pathway	3.27E-02
166	GO:0001666: response to hypoxia	3.35E-02
167	GO:0010029: regulation of seed germination	3.49E-02
168	GO:0009816: defense response to bacterium, incompatible interaction	3.49E-02
169	GO:0009627: systemic acquired resistance	3.63E-02
170	GO:0006950: response to stress	3.77E-02
171	GO:0048767: root hair elongation	4.20E-02
172	GO:0009813: flavonoid biosynthetic process	4.20E-02
173	GO:0006499: N-terminal protein myristoylation	4.34E-02
174	GO:0009407: toxin catabolic process	4.34E-02
175	GO:0010043: response to zinc ion	4.49E-02
176	GO:0016051: carbohydrate biosynthetic process	4.79E-02
177	GO:0034599: cellular response to oxidative stress	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
2	GO:0004370: glycerol kinase activity	0.00E+00
3	GO:0008777: acetylornithine deacetylase activity	0.00E+00
4	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
5	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
6	GO:0015930: glutamate synthase activity	0.00E+00
7	GO:0010279: indole-3-acetic acid amido synthetase activity	4.61E-05
8	GO:0004834: tryptophan synthase activity	4.61E-05
9	GO:0004356: glutamate-ammonia ligase activity	7.32E-05
10	GO:0004674: protein serine/threonine kinase activity	7.84E-05
11	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	8.52E-05
12	GO:0004012: phospholipid-translocating ATPase activity	1.47E-04
13	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	2.60E-04
14	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.60E-04
15	GO:0016041: glutamate synthase (ferredoxin) activity	2.60E-04
16	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.60E-04
17	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	2.60E-04
18	GO:0033984: indole-3-glycerol-phosphate lyase activity	2.60E-04
19	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.60E-04
20	GO:0003867: 4-aminobutyrate transaminase activity	2.60E-04
21	GO:0004713: protein tyrosine kinase activity	5.06E-04
22	GO:0050660: flavin adenine dinucleotide binding	5.38E-04
23	GO:0004061: arylformamidase activity	5.74E-04
24	GO:0019200: carbohydrate kinase activity	5.74E-04
25	GO:0050291: sphingosine N-acyltransferase activity	5.74E-04
26	GO:0003994: aconitate hydratase activity	5.74E-04
27	GO:0032934: sterol binding	5.74E-04
28	GO:0045140: inositol phosphoceramide synthase activity	5.74E-04
29	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.57E-04
30	GO:0004383: guanylate cyclase activity	9.31E-04
31	GO:0016805: dipeptidase activity	9.31E-04
32	GO:0080054: low-affinity nitrate transmembrane transporter activity	9.31E-04
33	GO:0005047: signal recognition particle binding	9.31E-04
34	GO:0016301: kinase activity	1.15E-03
35	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.33E-03
36	GO:0009055: electron carrier activity	1.36E-03
37	GO:0000993: RNA polymerase II core binding	1.78E-03
38	GO:0004031: aldehyde oxidase activity	1.78E-03
39	GO:0050302: indole-3-acetaldehyde oxidase activity	1.78E-03
40	GO:0043015: gamma-tubulin binding	1.78E-03
41	GO:0010328: auxin influx transmembrane transporter activity	1.78E-03
42	GO:0005516: calmodulin binding	1.91E-03
43	GO:0051538: 3 iron, 4 sulfur cluster binding	2.27E-03
44	GO:0045431: flavonol synthase activity	2.27E-03
45	GO:0005459: UDP-galactose transmembrane transporter activity	2.27E-03
46	GO:0036402: proteasome-activating ATPase activity	2.80E-03
47	GO:0005524: ATP binding	2.95E-03
48	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.36E-03
49	GO:0004124: cysteine synthase activity	3.36E-03
50	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.36E-03
51	GO:0004620: phospholipase activity	3.97E-03
52	GO:0008235: metalloexopeptidase activity	3.97E-03
53	GO:0102425: myricetin 3-O-glucosyltransferase activity	3.97E-03
54	GO:0102360: daphnetin 3-O-glucosyltransferase activity	3.97E-03
55	GO:0051213: dioxygenase activity	4.08E-03
56	GO:0030170: pyridoxal phosphate binding	4.31E-03
57	GO:0004033: aldo-keto reductase (NADP) activity	4.60E-03
58	GO:0047893: flavonol 3-O-glucosyltransferase activity	4.60E-03
59	GO:0030247: polysaccharide binding	4.80E-03
60	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	5.06E-03
61	GO:0008142: oxysterol binding	5.27E-03
62	GO:0003843: 1,3-beta-D-glucan synthase activity	5.27E-03
63	GO:0030145: manganese ion binding	6.15E-03
64	GO:0030955: potassium ion binding	6.71E-03
65	GO:0004743: pyruvate kinase activity	6.71E-03
66	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	6.74E-03
67	GO:0008171: O-methyltransferase activity	7.47E-03
68	GO:0004177: aminopeptidase activity	8.27E-03
69	GO:0008559: xenobiotic-transporting ATPase activity	8.27E-03
70	GO:0047372: acylglycerol lipase activity	8.27E-03
71	GO:0000287: magnesium ion binding	9.68E-03
72	GO:0019888: protein phosphatase regulator activity	9.94E-03
73	GO:0010329: auxin efflux transmembrane transporter activity	9.94E-03
74	GO:0017025: TBP-class protein binding	1.17E-02
75	GO:0005385: zinc ion transmembrane transporter activity	1.36E-02
76	GO:0043130: ubiquitin binding	1.36E-02
77	GO:0045735: nutrient reservoir activity	1.39E-02
78	GO:0008324: cation transmembrane transporter activity	1.46E-02
79	GO:0035251: UDP-glucosyltransferase activity	1.56E-02
80	GO:0015035: protein disulfide oxidoreductase activity	1.73E-02
81	GO:0016746: transferase activity, transferring acyl groups	1.73E-02
82	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.81E-02
83	GO:0003727: single-stranded RNA binding	1.88E-02
84	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.88E-02
85	GO:0047134: protein-disulfide reductase activity	1.99E-02
86	GO:0005451: monovalent cation:proton antiporter activity	2.11E-02
87	GO:0003713: transcription coactivator activity	2.22E-02
88	GO:0046873: metal ion transmembrane transporter activity	2.22E-02
89	GO:0004791: thioredoxin-disulfide reductase activity	2.34E-02
90	GO:0015299: solute:proton antiporter activity	2.34E-02
91	GO:0015144: carbohydrate transmembrane transporter activity	2.52E-02
92	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.71E-02
93	GO:0015385: sodium:proton antiporter activity	2.83E-02
94	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.83E-02
95	GO:0005351: sugar:proton symporter activity	2.84E-02
96	GO:0008017: microtubule binding	3.04E-02
97	GO:0008237: metallopeptidase activity	3.09E-02
98	GO:0008483: transaminase activity	3.09E-02
99	GO:0016413: O-acetyltransferase activity	3.22E-02
100	GO:0005506: iron ion binding	3.44E-02
101	GO:0008375: acetylglucosaminyltransferase activity	3.63E-02
102	GO:0016887: ATPase activity	3.68E-02
103	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.69E-02
104	GO:0005215: transporter activity	4.07E-02
105	GO:0005096: GTPase activator activity	4.20E-02
106	GO:0015238: drug transmembrane transporter activity	4.20E-02
107	GO:0008168: methyltransferase activity	4.31E-02
108	GO:0050897: cobalt ion binding	4.49E-02
109	GO:0003746: translation elongation factor activity	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0005886: plasma membrane	1.77E-06
3	GO:0032044: DSIF complex	2.60E-04
4	GO:0045252: oxoglutarate dehydrogenase complex	2.60E-04
5	GO:0005829: cytosol	5.68E-04
6	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.78E-03
7	GO:0016021: integral component of membrane	2.20E-03
8	GO:0005794: Golgi apparatus	3.19E-03
9	GO:0031597: cytosolic proteasome complex	3.36E-03
10	GO:0030173: integral component of Golgi membrane	3.36E-03
11	GO:0031595: nuclear proteasome complex	3.97E-03
12	GO:0005783: endoplasmic reticulum	5.07E-03
13	GO:0000148: 1,3-beta-D-glucan synthase complex	5.27E-03
14	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	5.27E-03
15	GO:0008540: proteasome regulatory particle, base subcomplex	6.71E-03
16	GO:0005737: cytoplasm	9.56E-03
17	GO:0016602: CCAAT-binding factor complex	9.94E-03
18	GO:0030176: integral component of endoplasmic reticulum membrane	1.17E-02
19	GO:0005770: late endosome	2.22E-02
20	GO:0009504: cell plate	2.46E-02
21	GO:0016592: mediator complex	2.70E-02
22	GO:0016020: membrane	3.20E-02
23	GO:0000325: plant-type vacuole	4.49E-02