co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G72340

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010203: response to very low fluence red light stimulus	0.00E+00
2	GO:0042906: xanthine transport	0.00E+00
3	GO:0009817: defense response to fungus, incompatible interaction	4.21E-06
4	GO:0000380: alternative mRNA splicing, via spliceosome	1.46E-05
5	GO:1902265: abscisic acid homeostasis	9.88E-05
6	GO:0032958: inositol phosphate biosynthetic process	9.88E-05
7	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	9.88E-05
8	GO:1990641: response to iron ion starvation	9.88E-05
9	GO:0030003: cellular cation homeostasis	2.32E-04
10	GO:0015857: uracil transport	2.32E-04
11	GO:0006101: citrate metabolic process	2.32E-04
12	GO:0015720: allantoin transport	2.32E-04
13	GO:0008643: carbohydrate transport	2.47E-04
14	GO:0071705: nitrogen compound transport	3.86E-04
15	GO:0042344: indole glucosinolate catabolic process	3.86E-04
16	GO:0016255: attachment of GPI anchor to protein	3.86E-04
17	GO:0017006: protein-tetrapyrrole linkage	3.86E-04
18	GO:0019438: aromatic compound biosynthetic process	5.54E-04
19	GO:0006020: inositol metabolic process	5.54E-04
20	GO:0009584: detection of visible light	5.54E-04
21	GO:0010600: regulation of auxin biosynthetic process	7.37E-04
22	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	7.37E-04
23	GO:0006646: phosphatidylethanolamine biosynthetic process	7.37E-04
24	GO:0009687: abscisic acid metabolic process	7.37E-04
25	GO:0042732: D-xylose metabolic process	1.14E-03
26	GO:0031053: primary miRNA processing	1.14E-03
27	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.36E-03
28	GO:0017148: negative regulation of translation	1.36E-03
29	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.36E-03
30	GO:0071470: cellular response to osmotic stress	1.36E-03
31	GO:0006811: ion transport	1.54E-03
32	GO:0010044: response to aluminum ion	1.59E-03
33	GO:0010161: red light signaling pathway	1.59E-03
34	GO:0010043: response to zinc ion	1.61E-03
35	GO:0045087: innate immune response	1.77E-03
36	GO:0009819: drought recovery	1.84E-03
37	GO:0009415: response to water	1.84E-03
38	GO:0032508: DNA duplex unwinding	1.84E-03
39	GO:0006102: isocitrate metabolic process	1.84E-03
40	GO:0010928: regulation of auxin mediated signaling pathway	1.84E-03
41	GO:0001510: RNA methylation	2.10E-03
42	GO:0009827: plant-type cell wall modification	2.10E-03
43	GO:0046685: response to arsenic-containing substance	2.37E-03
44	GO:0006098: pentose-phosphate shunt	2.37E-03
45	GO:0044550: secondary metabolite biosynthetic process	2.58E-03
46	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.65E-03
47	GO:0009638: phototropism	2.65E-03
48	GO:0009585: red, far-red light phototransduction	3.04E-03
49	GO:0009682: induced systemic resistance	3.25E-03
50	GO:0052544: defense response by callose deposition in cell wall	3.25E-03
51	GO:0006857: oligopeptide transport	3.25E-03
52	GO:0006816: calcium ion transport	3.25E-03
53	GO:0009737: response to abscisic acid	3.88E-03
54	GO:0007034: vacuolar transport	4.22E-03
55	GO:0019853: L-ascorbic acid biosynthetic process	4.57E-03
56	GO:0010030: positive regulation of seed germination	4.57E-03
57	GO:0007030: Golgi organization	4.57E-03
58	GO:0006406: mRNA export from nucleus	5.28E-03
59	GO:0016575: histone deacetylation	5.65E-03
60	GO:0006874: cellular calcium ion homeostasis	5.65E-03
61	GO:0019748: secondary metabolic process	6.42E-03
62	GO:0009693: ethylene biosynthetic process	6.82E-03
63	GO:0006012: galactose metabolic process	6.82E-03
64	GO:0009409: response to cold	7.20E-03
65	GO:0007623: circadian rhythm	7.43E-03
66	GO:0009738: abscisic acid-activated signaling pathway	7.54E-03
67	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	7.64E-03
68	GO:0010501: RNA secondary structure unwinding	8.07E-03
69	GO:0035556: intracellular signal transduction	8.42E-03
70	GO:0071472: cellular response to salt stress	8.50E-03
71	GO:0006662: glycerol ether metabolic process	8.50E-03
72	GO:0005975: carbohydrate metabolic process	8.56E-03
73	GO:0009617: response to bacterium	8.86E-03
74	GO:0006814: sodium ion transport	8.94E-03
75	GO:0008654: phospholipid biosynthetic process	9.39E-03
76	GO:0009630: gravitropism	1.03E-02
77	GO:1901657: glycosyl compound metabolic process	1.08E-02
78	GO:0019760: glucosinolate metabolic process	1.13E-02
79	GO:0006970: response to osmotic stress	1.24E-02
80	GO:0016126: sterol biosynthetic process	1.28E-02
81	GO:0010029: regulation of seed germination	1.33E-02
82	GO:0007165: signal transduction	1.38E-02
83	GO:0055114: oxidation-reduction process	1.50E-02
84	GO:0018298: protein-chromophore linkage	1.54E-02
85	GO:0010218: response to far red light	1.65E-02
86	GO:0009631: cold acclimation	1.71E-02
87	GO:0010119: regulation of stomatal movement	1.71E-02
88	GO:0009414: response to water deprivation	1.87E-02
89	GO:0034599: cellular response to oxidative stress	1.88E-02
90	GO:0006099: tricarboxylic acid cycle	1.88E-02
91	GO:0042742: defense response to bacterium	1.92E-02
92	GO:0006952: defense response	2.03E-02
93	GO:0042542: response to hydrogen peroxide	2.12E-02
94	GO:0009640: photomorphogenesis	2.18E-02
95	GO:0000165: MAPK cascade	2.50E-02
96	GO:0006813: potassium ion transport	2.70E-02
97	GO:0051603: proteolysis involved in cellular protein catabolic process	2.77E-02
98	GO:0009651: response to salt stress	2.81E-02
99	GO:0009909: regulation of flower development	2.90E-02
100	GO:0009735: response to cytokinin	3.43E-02
101	GO:0009416: response to light stimulus	3.75E-02
102	GO:0000398: mRNA splicing, via spliceosome	3.84E-02
103	GO:0006633: fatty acid biosynthetic process	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0004567: beta-mannosidase activity	0.00E+00
2	GO:0004421: hydroxymethylglutaryl-CoA synthase activity	0.00E+00
3	GO:0080082: esculin beta-glucosidase activity	0.00E+00
4	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
5	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
6	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
7	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
8	GO:0005272: sodium channel activity	0.00E+00
9	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
10	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
11	GO:0009045: xylose isomerase activity	0.00E+00
12	GO:0000828: inositol hexakisphosphate kinase activity	9.88E-05
13	GO:0030275: LRR domain binding	9.88E-05
14	GO:0031516: far-red light photoreceptor activity	9.88E-05
15	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	9.88E-05
16	GO:0000829: inositol heptakisphosphate kinase activity	9.88E-05
17	GO:0080079: cellobiose glucosidase activity	9.88E-05
18	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.32E-04
19	GO:0005274: allantoin uptake transmembrane transporter activity	2.32E-04
20	GO:0009883: red or far-red light photoreceptor activity	2.32E-04
21	GO:0004609: phosphatidylserine decarboxylase activity	2.32E-04
22	GO:0003994: aconitate hydratase activity	2.32E-04
23	GO:0008020: G-protein coupled photoreceptor activity	3.86E-04
24	GO:0017150: tRNA dihydrouridine synthase activity	3.86E-04
25	GO:0048027: mRNA 5'-UTR binding	5.54E-04
26	GO:0015210: uracil transmembrane transporter activity	7.37E-04
27	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	9.32E-04
28	GO:0010294: abscisic acid glucosyltransferase activity	9.32E-04
29	GO:0000293: ferric-chelate reductase activity	1.14E-03
30	GO:0019137: thioglucosidase activity	1.14E-03
31	GO:0102483: scopolin beta-glucosidase activity	1.27E-03
32	GO:0005261: cation channel activity	1.36E-03
33	GO:0004033: aldo-keto reductase (NADP) activity	1.84E-03
34	GO:0008422: beta-glucosidase activity	1.93E-03
35	GO:0005267: potassium channel activity	2.10E-03
36	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	2.10E-03
37	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.37E-03
38	GO:0004673: protein histidine kinase activity	2.95E-03
39	GO:0008171: O-methyltransferase activity	2.95E-03
40	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.21E-03
41	GO:0004565: beta-galactosidase activity	3.89E-03
42	GO:0000155: phosphorelay sensor kinase activity	3.89E-03
43	GO:0005262: calcium channel activity	3.89E-03
44	GO:0005217: intracellular ligand-gated ion channel activity	4.57E-03
45	GO:0004970: ionotropic glutamate receptor activity	4.57E-03
46	GO:0004407: histone deacetylase activity	5.28E-03
47	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	5.53E-03
48	GO:0004707: MAP kinase activity	6.03E-03
49	GO:0019706: protein-cysteine S-palmitoyltransferase activity	6.03E-03
50	GO:0022891: substrate-specific transmembrane transporter activity	6.82E-03
51	GO:0047134: protein-disulfide reductase activity	7.64E-03
52	GO:0004791: thioredoxin-disulfide reductase activity	8.94E-03
53	GO:0004197: cysteine-type endopeptidase activity	1.03E-02
54	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.08E-02
55	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.12E-02
56	GO:0019825: oxygen binding	1.23E-02
57	GO:0004497: monooxygenase activity	1.43E-02
58	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.49E-02
59	GO:0005509: calcium ion binding	1.74E-02
60	GO:0003697: single-stranded DNA binding	1.82E-02
61	GO:0005506: iron ion binding	1.89E-02
62	GO:0051539: 4 iron, 4 sulfur cluster binding	2.00E-02
63	GO:0003824: catalytic activity	2.16E-02
64	GO:0004185: serine-type carboxypeptidase activity	2.18E-02
65	GO:0003690: double-stranded DNA binding	2.77E-02
66	GO:0008234: cysteine-type peptidase activity	2.90E-02
67	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.11E-02
68	GO:0004672: protein kinase activity	3.11E-02
69	GO:0003729: mRNA binding	3.16E-02
70	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.25E-02
71	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.25E-02
72	GO:0016874: ligase activity	3.32E-02
73	GO:0022857: transmembrane transporter activity	3.32E-02
74	GO:0020037: heme binding	3.40E-02
75	GO:0015035: protein disulfide oxidoreductase activity	3.54E-02
76	GO:0015144: carbohydrate transmembrane transporter activity	4.62E-02
77	GO:0004674: protein serine/threonine kinase activity	4.88E-02
78	GO:0015297: antiporter activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0042765: GPI-anchor transamidase complex	3.86E-04
2	GO:0010445: nuclear dicing body	7.37E-04
3	GO:0000815: ESCRT III complex	1.36E-03
4	GO:0016020: membrane	2.43E-03
5	GO:0016604: nuclear body	2.65E-03
6	GO:0005886: plasma membrane	3.38E-03
7	GO:0016607: nuclear speck	3.70E-03
8	GO:0005764: lysosome	4.22E-03
9	GO:0016021: integral component of membrane	6.21E-03
10	GO:0009705: plant-type vacuole membrane	7.43E-03
11	GO:0005777: peroxisome	9.37E-03
12	GO:0005618: cell wall	1.14E-02
13	GO:0005829: cytosol	1.64E-02
14	GO:0009505: plant-type cell wall	2.55E-02
15	GO:0031966: mitochondrial membrane	2.57E-02
16	GO:0005681: spliceosomal complex	3.04E-02
17	GO:0048046: apoplast	3.16E-02