co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G70090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006792: regulation of sulfur utilization	0.00E+00
2	GO:1901038: cyanidin 3-O-glucoside metabolic process	0.00E+00
3	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
4	GO:0010411: xyloglucan metabolic process	1.95E-06
5	GO:0009813: flavonoid biosynthetic process	2.93E-06
6	GO:0042546: cell wall biogenesis	1.01E-05
7	GO:0010200: response to chitin	1.02E-05
8	GO:0009718: anthocyanin-containing compound biosynthetic process	3.33E-05
9	GO:0030154: cell differentiation	5.65E-05
10	GO:0009411: response to UV	1.21E-04
11	GO:0009751: response to salicylic acid	1.99E-04
12	GO:0033481: galacturonate biosynthetic process	2.41E-04
13	GO:0048438: floral whorl development	2.41E-04
14	GO:0019354: siroheme biosynthetic process	2.41E-04
15	GO:1901537: positive regulation of DNA demethylation	2.41E-04
16	GO:0009962: regulation of flavonoid biosynthetic process	2.41E-04
17	GO:2000029: regulation of proanthocyanidin biosynthetic process	2.41E-04
18	GO:0050691: regulation of defense response to virus by host	2.41E-04
19	GO:0080167: response to karrikin	5.00E-04
20	GO:1900386: positive regulation of flavonol biosynthetic process	5.34E-04
21	GO:0071395: cellular response to jasmonic acid stimulus	5.34E-04
22	GO:0007154: cell communication	5.34E-04
23	GO:0031542: positive regulation of anthocyanin biosynthetic process	5.34E-04
24	GO:0071497: cellular response to freezing	5.34E-04
25	GO:0010220: positive regulation of vernalization response	5.34E-04
26	GO:0071555: cell wall organization	7.93E-04
27	GO:0019419: sulfate reduction	8.68E-04
28	GO:0010581: regulation of starch biosynthetic process	8.68E-04
29	GO:0080168: abscisic acid transport	8.68E-04
30	GO:0009733: response to auxin	1.02E-03
31	GO:1902358: sulfate transmembrane transport	1.24E-03
32	GO:0031347: regulation of defense response	1.38E-03
33	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.38E-03
34	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.62E-03
35	GO:0019722: calcium-mediated signaling	1.63E-03
36	GO:0009826: unidimensional cell growth	1.64E-03
37	GO:0046345: abscisic acid catabolic process	1.65E-03
38	GO:0010224: response to UV-B	1.65E-03
39	GO:0000271: polysaccharide biosynthetic process	1.91E-03
40	GO:0009741: response to brassinosteroid	2.06E-03
41	GO:0045489: pectin biosynthetic process	2.06E-03
42	GO:0010438: cellular response to sulfur starvation	2.11E-03
43	GO:0071368: cellular response to cytokinin stimulus	2.11E-03
44	GO:0016131: brassinosteroid metabolic process	2.11E-03
45	GO:2000762: regulation of phenylpropanoid metabolic process	2.11E-03
46	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.54E-03
47	GO:0042732: D-xylose metabolic process	2.60E-03
48	GO:0000060: protein import into nucleus, translocation	2.60E-03
49	GO:0060918: auxin transport	2.60E-03
50	GO:0010583: response to cyclopentenone	2.71E-03
51	GO:0009828: plant-type cell wall loosening	3.07E-03
52	GO:0010077: maintenance of inflorescence meristem identity	3.12E-03
53	GO:0010076: maintenance of floral meristem identity	3.12E-03
54	GO:0007267: cell-cell signaling	3.26E-03
55	GO:0050829: defense response to Gram-negative bacterium	3.68E-03
56	GO:0006400: tRNA modification	3.68E-03
57	GO:0051510: regulation of unidimensional cell growth	3.68E-03
58	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.87E-03
59	GO:0030162: regulation of proteolysis	4.27E-03
60	GO:0010439: regulation of glucosinolate biosynthetic process	4.27E-03
61	GO:2000070: regulation of response to water deprivation	4.27E-03
62	GO:0040008: regulation of growth	4.65E-03
63	GO:0009753: response to jasmonic acid	4.87E-03
64	GO:2000031: regulation of salicylic acid mediated signaling pathway	4.89E-03
65	GO:0010099: regulation of photomorphogenesis	4.89E-03
66	GO:0009056: catabolic process	5.54E-03
67	GO:0051865: protein autoubiquitination	5.54E-03
68	GO:0009739: response to gibberellin	5.70E-03
69	GO:0009638: phototropism	6.21E-03
70	GO:0006779: porphyrin-containing compound biosynthetic process	6.21E-03
71	GO:0043069: negative regulation of programmed cell death	6.92E-03
72	GO:0051555: flavonol biosynthetic process	6.92E-03
73	GO:0000103: sulfate assimilation	6.92E-03
74	GO:0010015: root morphogenesis	7.65E-03
75	GO:0000038: very long-chain fatty acid metabolic process	7.65E-03
76	GO:0009698: phenylpropanoid metabolic process	7.65E-03
77	GO:1903507: negative regulation of nucleic acid-templated transcription	7.65E-03
78	GO:0000272: polysaccharide catabolic process	7.65E-03
79	GO:0016024: CDP-diacylglycerol biosynthetic process	8.41E-03
80	GO:0010582: floral meristem determinacy	8.41E-03
81	GO:0016925: protein sumoylation	8.41E-03
82	GO:0030036: actin cytoskeleton organization	9.20E-03
83	GO:0018107: peptidyl-threonine phosphorylation	9.20E-03
84	GO:0010540: basipetal auxin transport	1.00E-02
85	GO:0034605: cellular response to heat	1.00E-02
86	GO:0010143: cutin biosynthetic process	1.00E-02
87	GO:0002237: response to molecule of bacterial origin	1.00E-02
88	GO:0009723: response to ethylene	1.04E-02
89	GO:0009585: red, far-red light phototransduction	1.05E-02
90	GO:0009969: xyloglucan biosynthetic process	1.09E-02
91	GO:0009225: nucleotide-sugar metabolic process	1.09E-02
92	GO:0006468: protein phosphorylation	1.18E-02
93	GO:0005992: trehalose biosynthetic process	1.26E-02
94	GO:0006487: protein N-linked glycosylation	1.26E-02
95	GO:0019344: cysteine biosynthetic process	1.26E-02
96	GO:0019953: sexual reproduction	1.35E-02
97	GO:0010026: trichome differentiation	1.35E-02
98	GO:0045454: cell redox homeostasis	1.42E-02
99	GO:0016998: cell wall macromolecule catabolic process	1.45E-02
100	GO:0010017: red or far-red light signaling pathway	1.54E-02
101	GO:0040007: growth	1.64E-02
102	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.64E-02
103	GO:0010214: seed coat development	1.74E-02
104	GO:0010584: pollen exine formation	1.74E-02
105	GO:0048653: anther development	1.95E-02
106	GO:0006355: regulation of transcription, DNA-templated	1.99E-02
107	GO:0010268: brassinosteroid homeostasis	2.05E-02
108	GO:0009958: positive gravitropism	2.05E-02
109	GO:0009791: post-embryonic development	2.27E-02
110	GO:0016132: brassinosteroid biosynthetic process	2.38E-02
111	GO:0002229: defense response to oomycetes	2.38E-02
112	GO:0055114: oxidation-reduction process	2.48E-02
113	GO:0009873: ethylene-activated signaling pathway	2.56E-02
114	GO:1901657: glycosyl compound metabolic process	2.62E-02
115	GO:0016125: sterol metabolic process	2.73E-02
116	GO:0019760: glucosinolate metabolic process	2.73E-02
117	GO:0009639: response to red or far red light	2.73E-02
118	GO:0001666: response to hypoxia	3.10E-02
119	GO:0048573: photoperiodism, flowering	3.48E-02
120	GO:0016311: dephosphorylation	3.61E-02
121	GO:0009738: abscisic acid-activated signaling pathway	3.65E-02
122	GO:0048767: root hair elongation	3.88E-02
123	GO:0010218: response to far red light	4.01E-02
124	GO:0007568: aging	4.15E-02
125	GO:0048527: lateral root development	4.15E-02
126	GO:0009860: pollen tube growth	4.32E-02
127	GO:0009637: response to blue light	4.43E-02
128	GO:0009867: jasmonic acid mediated signaling pathway	4.43E-02
129	GO:0016051: carbohydrate biosynthetic process	4.43E-02
130	GO:0045893: positive regulation of transcription, DNA-templated	4.50E-02
131	GO:0006351: transcription, DNA-templated	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0047890: flavanone 4-reductase activity	0.00E+00
2	GO:0016711: flavonoid 3'-monooxygenase activity	0.00E+00
3	GO:0004851: uroporphyrin-III C-methyltransferase activity	0.00E+00
4	GO:0045552: dihydrokaempferol 4-reductase activity	0.00E+00
5	GO:0090411: brassinosteroid binding	0.00E+00
6	GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity	0.00E+00
7	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.47E-05
8	GO:0045430: chalcone isomerase activity	4.05E-05
9	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.33E-05
10	GO:0035252: UDP-xylosyltransferase activity	9.47E-05
11	GO:0044212: transcription regulatory region DNA binding	2.07E-04
12	GO:0045486: naringenin 3-dioxygenase activity	2.41E-04
13	GO:0080132: fatty acid alpha-hydroxylase activity	2.41E-04
14	GO:0090440: abscisic acid transporter activity	2.41E-04
15	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	5.34E-04
16	GO:0050736: O-malonyltransferase activity	5.34E-04
17	GO:0048531: beta-1,3-galactosyltransferase activity	5.34E-04
18	GO:0009973: adenylyl-sulfate reductase activity	5.34E-04
19	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	5.34E-04
20	GO:0043565: sequence-specific DNA binding	5.89E-04
21	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	6.89E-04
22	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	8.33E-04
23	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	8.68E-04
24	GO:0033843: xyloglucan 6-xylosyltransferase activity	1.24E-03
25	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.24E-03
26	GO:0050378: UDP-glucuronate 4-epimerase activity	1.65E-03
27	GO:0031386: protein tag	2.11E-03
28	GO:0010427: abscisic acid binding	2.60E-03
29	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.60E-03
30	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.60E-03
31	GO:0016161: beta-amylase activity	3.12E-03
32	GO:0016621: cinnamoyl-CoA reductase activity	3.68E-03
33	GO:0019899: enzyme binding	3.68E-03
34	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.42E-03
35	GO:0008271: secondary active sulfate transmembrane transporter activity	4.89E-03
36	GO:0016207: 4-coumarate-CoA ligase activity	5.54E-03
37	GO:0003700: transcription factor activity, sequence-specific DNA binding	6.92E-03
38	GO:0004864: protein phosphatase inhibitor activity	6.92E-03
39	GO:0004805: trehalose-phosphatase activity	6.92E-03
40	GO:0008327: methyl-CpG binding	7.65E-03
41	GO:0015116: sulfate transmembrane transporter activity	8.41E-03
42	GO:0000976: transcription regulatory region sequence-specific DNA binding	8.41E-03
43	GO:0005506: iron ion binding	9.06E-03
44	GO:0004674: protein serine/threonine kinase activity	9.83E-03
45	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.00E-02
46	GO:0003712: transcription cofactor activity	1.09E-02
47	GO:0016757: transferase activity, transferring glycosyl groups	1.13E-02
48	GO:0031418: L-ascorbic acid binding	1.26E-02
49	GO:0003714: transcription corepressor activity	1.26E-02
50	GO:0052689: carboxylic ester hydrolase activity	1.29E-02
51	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.54E-02
52	GO:0019825: oxygen binding	1.78E-02
53	GO:0004672: protein kinase activity	1.81E-02
54	GO:0016758: transferase activity, transferring hexosyl groups	1.83E-02
55	GO:0004402: histone acetyltransferase activity	1.95E-02
56	GO:0020037: heme binding	2.04E-02
57	GO:0001085: RNA polymerase II transcription factor binding	2.05E-02
58	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.14E-02
59	GO:0050662: coenzyme binding	2.16E-02
60	GO:0004872: receptor activity	2.27E-02
61	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.62E-02
62	GO:0016759: cellulose synthase activity	2.73E-02
63	GO:0016791: phosphatase activity	2.73E-02
64	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.85E-02
65	GO:0005200: structural constituent of cytoskeleton	2.85E-02
66	GO:0008375: acetylglucosaminyltransferase activity	3.35E-02
67	GO:0102483: scopolin beta-glucosidase activity	3.48E-02
68	GO:0004806: triglyceride lipase activity	3.48E-02
69	GO:0030247: polysaccharide binding	3.48E-02
70	GO:0015238: drug transmembrane transporter activity	3.88E-02
71	GO:0003677: DNA binding	3.93E-02
72	GO:0046982: protein heterodimerization activity	3.94E-02
73	GO:0016788: hydrolase activity, acting on ester bonds	4.09E-02
74	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.15E-02
75	GO:0003682: chromatin binding	4.24E-02
76	GO:0046983: protein dimerization activity	4.55E-02
77	GO:0008422: beta-glucosidase activity	4.71E-02
78	GO:0016740: transferase activity	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0090568: nuclear transcriptional repressor complex	0.00E+00
2	GO:0042406: extrinsic component of endoplasmic reticulum membrane	9.82E-06
3	GO:0009505: plant-type cell wall	1.67E-05
4	GO:0031225: anchored component of membrane	9.86E-05
5	GO:0005576: extracellular region	7.62E-04
6	GO:0046658: anchored component of plasma membrane	1.37E-03
7	GO:0048046: apoplast	1.75E-03
8	GO:0009506: plasmodesma	1.80E-03
9	GO:0005794: Golgi apparatus	2.17E-03
10	GO:0010369: chromocenter	3.12E-03
11	GO:0005615: extracellular space	5.70E-03
12	GO:0005618: cell wall	5.93E-03
13	GO:0005770: late endosome	2.05E-02
14	GO:0032580: Golgi cisterna membrane	2.73E-02
15	GO:0005667: transcription factor complex	3.35E-02
16	GO:0019005: SCF ubiquitin ligase complex	3.75E-02
17	GO:0000786: nucleosome	4.29E-02
18	GO:0000139: Golgi membrane	4.64E-02