co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G69740

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002184: cytoplasmic translational termination	0.00E+00
2	GO:0046719: regulation by virus of viral protein levels in host cell	0.00E+00
3	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
4	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
5	GO:0042407: cristae formation	0.00E+00
6	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
7	GO:0006573: valine metabolic process	0.00E+00
8	GO:0006223: uracil salvage	0.00E+00
9	GO:0016553: base conversion or substitution editing	0.00E+00
10	GO:0006399: tRNA metabolic process	0.00E+00
11	GO:0070125: mitochondrial translational elongation	0.00E+00
12	GO:0006412: translation	3.75E-17
13	GO:0032544: plastid translation	1.61E-08
14	GO:0009658: chloroplast organization	2.58E-08
15	GO:0042254: ribosome biogenesis	5.57E-07
16	GO:0006695: cholesterol biosynthetic process	1.16E-06
17	GO:0009735: response to cytokinin	1.81E-06
18	GO:0000413: protein peptidyl-prolyl isomerization	6.82E-05
19	GO:0006430: lysyl-tRNA aminoacylation	1.54E-04
20	GO:0060627: regulation of vesicle-mediated transport	1.54E-04
21	GO:0043489: RNA stabilization	1.54E-04
22	GO:0006426: glycyl-tRNA aminoacylation	1.54E-04
23	GO:0006551: leucine metabolic process	1.54E-04
24	GO:0042371: vitamin K biosynthetic process	1.54E-04
25	GO:0045337: farnesyl diphosphate biosynthetic process	1.70E-04
26	GO:0033384: geranyl diphosphate biosynthetic process	1.70E-04
27	GO:0009790: embryo development	2.59E-04
28	GO:0006633: fatty acid biosynthetic process	2.92E-04
29	GO:0009793: embryo development ending in seed dormancy	3.44E-04
30	GO:0006568: tryptophan metabolic process	3.51E-04
31	GO:0006423: cysteinyl-tRNA aminoacylation	3.51E-04
32	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	5.75E-04
33	GO:2001295: malonyl-CoA biosynthetic process	5.75E-04
34	GO:0006418: tRNA aminoacylation for protein translation	6.32E-04
35	GO:0006241: CTP biosynthetic process	8.23E-04
36	GO:0019048: modulation by virus of host morphology or physiology	8.23E-04
37	GO:0006165: nucleoside diphosphate phosphorylation	8.23E-04
38	GO:0006228: UTP biosynthetic process	8.23E-04
39	GO:0031048: chromatin silencing by small RNA	8.23E-04
40	GO:0010088: phloem development	8.23E-04
41	GO:0006424: glutamyl-tRNA aminoacylation	8.23E-04
42	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	8.23E-04
43	GO:2001141: regulation of RNA biosynthetic process	8.23E-04
44	GO:0006183: GTP biosynthetic process	1.09E-03
45	GO:0051567: histone H3-K9 methylation	1.09E-03
46	GO:0044206: UMP salvage	1.09E-03
47	GO:0006021: inositol biosynthetic process	1.09E-03
48	GO:0006808: regulation of nitrogen utilization	1.09E-03
49	GO:0006457: protein folding	1.38E-03
50	GO:0048359: mucilage metabolic process involved in seed coat development	1.38E-03
51	GO:0043097: pyrimidine nucleoside salvage	1.38E-03
52	GO:0032543: mitochondrial translation	1.38E-03
53	GO:0045038: protein import into chloroplast thylakoid membrane	1.38E-03
54	GO:0032502: developmental process	1.45E-03
55	GO:0042549: photosystem II stabilization	1.70E-03
56	GO:0006206: pyrimidine nucleobase metabolic process	1.70E-03
57	GO:0016458: gene silencing	1.70E-03
58	GO:0010027: thylakoid membrane organization	1.96E-03
59	GO:0042372: phylloquinone biosynthetic process	2.03E-03
60	GO:0009082: branched-chain amino acid biosynthetic process	2.03E-03
61	GO:0006694: steroid biosynthetic process	2.03E-03
62	GO:0009099: valine biosynthetic process	2.03E-03
63	GO:0009854: oxidative photosynthetic carbon pathway	2.03E-03
64	GO:0010555: response to mannitol	2.03E-03
65	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.39E-03
66	GO:0045995: regulation of embryonic development	2.39E-03
67	GO:0009817: defense response to fungus, incompatible interaction	2.54E-03
68	GO:0048481: plant ovule development	2.54E-03
69	GO:0009642: response to light intensity	2.77E-03
70	GO:0042255: ribosome assembly	2.77E-03
71	GO:0006353: DNA-templated transcription, termination	2.77E-03
72	GO:0000028: ribosomal small subunit assembly	2.77E-03
73	GO:0000105: histidine biosynthetic process	2.77E-03
74	GO:0042742: defense response to bacterium	3.04E-03
75	GO:0071482: cellular response to light stimulus	3.16E-03
76	GO:0009097: isoleucine biosynthetic process	3.16E-03
77	GO:0009808: lignin metabolic process	3.16E-03
78	GO:0015780: nucleotide-sugar transport	3.58E-03
79	GO:0043067: regulation of programmed cell death	4.01E-03
80	GO:0006949: syncytium formation	4.46E-03
81	GO:0030422: production of siRNA involved in RNA interference	4.46E-03
82	GO:0009073: aromatic amino acid family biosynthetic process	4.92E-03
83	GO:0006352: DNA-templated transcription, initiation	4.92E-03
84	GO:0006790: sulfur compound metabolic process	5.41E-03
85	GO:0045037: protein import into chloroplast stroma	5.41E-03
86	GO:0010020: chloroplast fission	6.42E-03
87	GO:0010207: photosystem II assembly	6.42E-03
88	GO:0046854: phosphatidylinositol phosphorylation	6.95E-03
89	GO:0019344: cysteine biosynthetic process	8.05E-03
90	GO:0009116: nucleoside metabolic process	8.05E-03
91	GO:0000027: ribosomal large subunit assembly	8.05E-03
92	GO:0008299: isoprenoid biosynthetic process	8.63E-03
93	GO:0006306: DNA methylation	9.22E-03
94	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.04E-02
95	GO:0009411: response to UV	1.04E-02
96	GO:0019722: calcium-mediated signaling	1.11E-02
97	GO:0008033: tRNA processing	1.24E-02
98	GO:0010197: polar nucleus fusion	1.31E-02
99	GO:0006342: chromatin silencing	1.31E-02
100	GO:0007018: microtubule-based movement	1.37E-02
101	GO:0016132: brassinosteroid biosynthetic process	1.52E-02
102	GO:0008380: RNA splicing	1.64E-02
103	GO:0009828: plant-type cell wall loosening	1.74E-02
104	GO:0007267: cell-cell signaling	1.81E-02
105	GO:0009409: response to cold	1.82E-02
106	GO:0051607: defense response to virus	1.89E-02
107	GO:0009826: unidimensional cell growth	2.05E-02
108	GO:0009816: defense response to bacterium, incompatible interaction	2.05E-02
109	GO:0009627: systemic acquired resistance	2.13E-02
110	GO:0015995: chlorophyll biosynthetic process	2.21E-02
111	GO:0009834: plant-type secondary cell wall biogenesis	2.55E-02
112	GO:0009631: cold acclimation	2.64E-02
113	GO:0009853: photorespiration	2.81E-02
114	GO:0045087: innate immune response	2.81E-02
115	GO:0009637: response to blue light	2.81E-02
116	GO:0030001: metal ion transport	3.09E-02
117	GO:0045454: cell redox homeostasis	3.16E-02
118	GO:0006631: fatty acid metabolic process	3.18E-02
119	GO:0042542: response to hydrogen peroxide	3.27E-02
120	GO:0010114: response to red light	3.37E-02
121	GO:0008643: carbohydrate transport	3.56E-02
122	GO:0042538: hyperosmotic salinity response	3.96E-02
123	GO:0009664: plant-type cell wall organization	3.96E-02
124	GO:0006364: rRNA processing	4.17E-02
125	GO:0009585: red, far-red light phototransduction	4.17E-02
126	GO:0006417: regulation of translation	4.48E-02
127	GO:0006096: glycolytic process	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
2	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
3	GO:0005048: signal sequence binding	0.00E+00
4	GO:0050614: delta24-sterol reductase activity	0.00E+00
5	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
6	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
7	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	0.00E+00
8	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
9	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
10	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
11	GO:0004401: histidinol-phosphatase activity	0.00E+00
12	GO:0008887: glycerate kinase activity	0.00E+00
13	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
14	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
15	GO:0019843: rRNA binding	2.61E-23
16	GO:0003735: structural constituent of ribosome	1.28E-16
17	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	1.16E-06
18	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.72E-06
19	GO:0051920: peroxiredoxin activity	6.42E-05
20	GO:0016209: antioxidant activity	1.11E-04
21	GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity	1.54E-04
22	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.54E-04
23	GO:0004824: lysine-tRNA ligase activity	1.54E-04
24	GO:0003984: acetolactate synthase activity	1.54E-04
25	GO:0004820: glycine-tRNA ligase activity	1.54E-04
26	GO:0010347: L-galactose-1-phosphate phosphatase activity	1.54E-04
27	GO:0004337: geranyltranstransferase activity	1.70E-04
28	GO:0004161: dimethylallyltranstransferase activity	2.81E-04
29	GO:0052832: inositol monophosphate 3-phosphatase activity	3.51E-04
30	GO:0004817: cysteine-tRNA ligase activity	3.51E-04
31	GO:0008934: inositol monophosphate 1-phosphatase activity	3.51E-04
32	GO:0052833: inositol monophosphate 4-phosphatase activity	3.51E-04
33	GO:0008266: poly(U) RNA binding	4.15E-04
34	GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity	5.75E-04
35	GO:0070330: aromatase activity	5.75E-04
36	GO:0017150: tRNA dihydrouridine synthase activity	5.75E-04
37	GO:0002161: aminoacyl-tRNA editing activity	5.75E-04
38	GO:0004148: dihydrolipoyl dehydrogenase activity	5.75E-04
39	GO:0004075: biotin carboxylase activity	5.75E-04
40	GO:0030267: glyoxylate reductase (NADP) activity	5.75E-04
41	GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity	5.75E-04
42	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	8.23E-04
43	GO:0035197: siRNA binding	8.23E-04
44	GO:0004550: nucleoside diphosphate kinase activity	8.23E-04
45	GO:0043023: ribosomal large subunit binding	8.23E-04
46	GO:0008097: 5S rRNA binding	8.23E-04
47	GO:0003727: single-stranded RNA binding	8.91E-04
48	GO:0004812: aminoacyl-tRNA ligase activity	9.61E-04
49	GO:0004845: uracil phosphoribosyltransferase activity	1.09E-03
50	GO:0016836: hydro-lyase activity	1.09E-03
51	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	1.09E-03
52	GO:0004045: aminoacyl-tRNA hydrolase activity	1.09E-03
53	GO:0016987: sigma factor activity	1.09E-03
54	GO:0001053: plastid sigma factor activity	1.09E-03
55	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.38E-03
56	GO:0004040: amidase activity	1.38E-03
57	GO:0018685: alkane 1-monooxygenase activity	1.38E-03
58	GO:0003989: acetyl-CoA carboxylase activity	1.38E-03
59	GO:0003924: GTPase activity	1.66E-03
60	GO:0016208: AMP binding	1.70E-03
61	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.03E-03
62	GO:0004849: uridine kinase activity	2.03E-03
63	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.03E-03
64	GO:0005525: GTP binding	2.11E-03
65	GO:0016831: carboxy-lyase activity	2.39E-03
66	GO:0008312: 7S RNA binding	2.77E-03
67	GO:0004033: aldo-keto reductase (NADP) activity	2.77E-03
68	GO:0003746: translation elongation factor activity	3.21E-03
69	GO:0047617: acyl-CoA hydrolase activity	4.01E-03
70	GO:0004521: endoribonuclease activity	5.41E-03
71	GO:0000049: tRNA binding	5.41E-03
72	GO:0003729: mRNA binding	6.09E-03
73	GO:0030570: pectate lyase activity	1.04E-02
74	GO:0008514: organic anion transmembrane transporter activity	1.11E-02
75	GO:0008080: N-acetyltransferase activity	1.31E-02
76	GO:0008237: metallopeptidase activity	1.81E-02
77	GO:0016597: amino acid binding	1.89E-02
78	GO:0000287: magnesium ion binding	2.09E-02
79	GO:0004601: peroxidase activity	2.13E-02
80	GO:0016788: hydrolase activity, acting on ester bonds	2.17E-02
81	GO:0008236: serine-type peptidase activity	2.29E-02
82	GO:0050660: flavin adenine dinucleotide binding	2.46E-02
83	GO:0004222: metalloendopeptidase activity	2.55E-02
84	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.64E-02
85	GO:0005507: copper ion binding	2.67E-02
86	GO:0052689: carboxylic ester hydrolase activity	2.91E-02
87	GO:0043621: protein self-association	3.56E-02
88	GO:0005198: structural molecule activity	3.66E-02
89	GO:0005524: ATP binding	3.68E-02
90	GO:0003723: RNA binding	4.12E-02
91	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.17E-02
92	GO:0003690: double-stranded DNA binding	4.27E-02
93	GO:0003777: microtubule motor activity	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0005835: fatty acid synthase complex	0.00E+00
2	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	0.00E+00
3	GO:0005948: acetolactate synthase complex	0.00E+00
4	GO:0009547: plastid ribosome	0.00E+00
5	GO:0009570: chloroplast stroma	1.90E-55
6	GO:0009507: chloroplast	1.43E-46
7	GO:0009941: chloroplast envelope	1.11E-38
8	GO:0009579: thylakoid	7.13E-16
9	GO:0005840: ribosome	5.76E-14
10	GO:0009535: chloroplast thylakoid membrane	2.26E-08
11	GO:0031977: thylakoid lumen	4.23E-08
12	GO:0009534: chloroplast thylakoid	4.48E-07
13	GO:0009543: chloroplast thylakoid lumen	8.82E-07
14	GO:0000311: plastid large ribosomal subunit	9.45E-06
15	GO:0000312: plastid small ribosomal subunit	1.46E-05
16	GO:0080085: signal recognition particle, chloroplast targeting	3.51E-04
17	GO:0042651: thylakoid membrane	6.32E-04
18	GO:0015935: small ribosomal subunit	6.92E-04
19	GO:0022626: cytosolic ribosome	8.21E-04
20	GO:0005719: nuclear euchromatin	8.23E-04
21	GO:0010319: stromule	1.74E-03
22	GO:0030529: intracellular ribonucleoprotein complex	1.96E-03
23	GO:0022627: cytosolic small ribosomal subunit	3.14E-03
24	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	3.16E-03
25	GO:0005739: mitochondrion	3.24E-03
26	GO:0015030: Cajal body	4.01E-03
27	GO:0009536: plastid	4.35E-03
28	GO:0031969: chloroplast membrane	5.03E-03
29	GO:0022625: cytosolic large ribosomal subunit	5.37E-03
30	GO:0005875: microtubule associated complex	7.49E-03
31	GO:0009706: chloroplast inner membrane	7.91E-03
32	GO:0009532: plastid stroma	9.22E-03
33	GO:0048046: apoplast	9.79E-03
34	GO:0005871: kinesin complex	1.17E-02
35	GO:0009295: nucleoid	1.81E-02
36	GO:0005778: peroxisomal membrane	1.81E-02
37	GO:0016020: membrane	1.82E-02
38	GO:0046658: anchored component of plasma membrane	1.82E-02
39	GO:0005874: microtubule	2.55E-02
40	GO:0015934: large ribosomal subunit	2.64E-02