co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G69640

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019484: beta-alanine catabolic process	0.00E+00
2	GO:0006725: cellular aromatic compound metabolic process	0.00E+00
3	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
4	GO:0015833: peptide transport	0.00E+00
5	GO:0006105: succinate metabolic process	0.00E+00
6	GO:0009865: pollen tube adhesion	4.88E-05
7	GO:0006540: glutamate decarboxylation to succinate	4.88E-05
8	GO:0009450: gamma-aminobutyric acid catabolic process	4.88E-05
9	GO:0071366: cellular response to indolebutyric acid stimulus	4.88E-05
10	GO:0052544: defense response by callose deposition in cell wall	5.27E-05
11	GO:0042939: tripeptide transport	1.20E-04
12	GO:0032509: endosome transport via multivesicular body sorting pathway	1.20E-04
13	GO:0010033: response to organic substance	1.20E-04
14	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	2.06E-04
15	GO:0042344: indole glucosinolate catabolic process	2.06E-04
16	GO:0071786: endoplasmic reticulum tubular network organization	3.01E-04
17	GO:0006882: cellular zinc ion homeostasis	3.01E-04
18	GO:0000578: embryonic axis specification	3.01E-04
19	GO:0006020: inositol metabolic process	3.01E-04
20	GO:2001289: lipid X metabolic process	3.01E-04
21	GO:0070301: cellular response to hydrogen peroxide	3.01E-04
22	GO:0006878: cellular copper ion homeostasis	4.04E-04
23	GO:0042938: dipeptide transport	4.04E-04
24	GO:0048830: adventitious root development	4.04E-04
25	GO:0006536: glutamate metabolic process	4.04E-04
26	GO:1900425: negative regulation of defense response to bacterium	6.29E-04
27	GO:0009759: indole glucosinolate biosynthetic process	6.29E-04
28	GO:0015691: cadmium ion transport	6.29E-04
29	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	6.29E-04
30	GO:0048317: seed morphogenesis	6.29E-04
31	GO:0016051: carbohydrate biosynthetic process	7.29E-04
32	GO:0080060: integument development	7.50E-04
33	GO:0016192: vesicle-mediated transport	7.76E-04
34	GO:0010161: red light signaling pathway	8.75E-04
35	GO:0045995: regulation of embryonic development	8.75E-04
36	GO:0009395: phospholipid catabolic process	8.75E-04
37	GO:1900150: regulation of defense response to fungus	1.01E-03
38	GO:0048364: root development	1.24E-03
39	GO:0046916: cellular transition metal ion homeostasis	1.28E-03
40	GO:0048367: shoot system development	1.49E-03
41	GO:0006535: cysteine biosynthetic process from serine	1.59E-03
42	GO:0009641: shade avoidance	1.59E-03
43	GO:0009970: cellular response to sulfate starvation	1.59E-03
44	GO:0009684: indoleacetic acid biosynthetic process	1.75E-03
45	GO:0009682: induced systemic resistance	1.75E-03
46	GO:0006468: protein phosphorylation	1.97E-03
47	GO:0007034: vacuolar transport	2.26E-03
48	GO:0006541: glutamine metabolic process	2.26E-03
49	GO:0005985: sucrose metabolic process	2.44E-03
50	GO:0010053: root epidermal cell differentiation	2.44E-03
51	GO:0034976: response to endoplasmic reticulum stress	2.62E-03
52	GO:0000162: tryptophan biosynthetic process	2.62E-03
53	GO:0007010: cytoskeleton organization	2.81E-03
54	GO:0019344: cysteine biosynthetic process	2.81E-03
55	GO:0006470: protein dephosphorylation	3.37E-03
56	GO:0031348: negative regulation of defense response	3.41E-03
57	GO:0040007: growth	3.61E-03
58	GO:0006012: galactose metabolic process	3.61E-03
59	GO:0010154: fruit development	4.48E-03
60	GO:0048544: recognition of pollen	4.71E-03
61	GO:0010183: pollen tube guidance	4.94E-03
62	GO:0006914: autophagy	5.91E-03
63	GO:0006904: vesicle docking involved in exocytosis	6.16E-03
64	GO:0010286: heat acclimation	6.16E-03
65	GO:0045454: cell redox homeostasis	6.74E-03
66	GO:0006886: intracellular protein transport	6.95E-03
67	GO:0009627: systemic acquired resistance	7.20E-03
68	GO:0016049: cell growth	7.75E-03
69	GO:0015031: protein transport	7.98E-03
70	GO:0009817: defense response to fungus, incompatible interaction	8.03E-03
71	GO:0048767: root hair elongation	8.31E-03
72	GO:0006811: ion transport	8.60E-03
73	GO:0009409: response to cold	8.64E-03
74	GO:0006865: amino acid transport	9.17E-03
75	GO:0030001: metal ion transport	1.04E-02
76	GO:0006887: exocytosis	1.07E-02
77	GO:0010114: response to red light	1.13E-02
78	GO:0006855: drug transmembrane transport	1.26E-02
79	GO:0000165: MAPK cascade	1.30E-02
80	GO:0035556: intracellular signal transduction	1.56E-02
81	GO:0009620: response to fungus	1.68E-02
82	GO:0006396: RNA processing	1.83E-02
83	GO:0009845: seed germination	2.23E-02
84	GO:0009790: embryo development	2.35E-02
85	GO:0040008: regulation of growth	2.56E-02
86	GO:0009651: response to salt stress	2.72E-02
87	GO:0010468: regulation of gene expression	3.00E-02
88	GO:0042742: defense response to bacterium	3.00E-02
89	GO:0006979: response to oxidative stress	3.02E-02
90	GO:0030154: cell differentiation	3.27E-02
91	GO:0009860: pollen tube growth	3.81E-02
92	GO:0048366: leaf development	4.06E-02
93	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.31E-02
94	GO:0006810: transport	4.39E-02
95	GO:0046686: response to cadmium ion	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0015334: high-affinity oligopeptide transporter activity	0.00E+00
2	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
3	GO:0016701: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	0.00E+00
4	GO:0015197: peptide transporter activity	0.00E+00
5	GO:0046870: cadmium ion binding	4.88E-05
6	GO:0004112: cyclic-nucleotide phosphodiesterase activity	4.88E-05
7	GO:0003867: 4-aminobutyrate transaminase activity	4.88E-05
8	GO:0042937: tripeptide transporter activity	1.20E-04
9	GO:0032791: lead ion binding	1.20E-04
10	GO:0047216: inositol 3-alpha-galactosyltransferase activity	1.20E-04
11	GO:0032403: protein complex binding	2.06E-04
12	GO:0015086: cadmium ion transmembrane transporter activity	3.01E-04
13	GO:0009001: serine O-acetyltransferase activity	3.01E-04
14	GO:0042936: dipeptide transporter activity	4.04E-04
15	GO:0008198: ferrous iron binding	5.13E-04
16	GO:0050897: cobalt ion binding	6.67E-04
17	GO:0004525: ribonuclease III activity	1.01E-03
18	GO:0004722: protein serine/threonine phosphatase activity	1.02E-03
19	GO:0045309: protein phosphorylated amino acid binding	1.43E-03
20	GO:0015020: glucuronosyltransferase activity	1.59E-03
21	GO:0019904: protein domain specific binding	1.75E-03
22	GO:0008081: phosphoric diester hydrolase activity	2.08E-03
23	GO:0005524: ATP binding	2.69E-03
24	GO:0004707: MAP kinase activity	3.20E-03
25	GO:0004674: protein serine/threonine kinase activity	3.21E-03
26	GO:0003756: protein disulfide isomerase activity	3.82E-03
27	GO:0001085: RNA polymerase II transcription factor binding	4.48E-03
28	GO:0005200: structural constituent of cytoskeleton	6.16E-03
29	GO:0051213: dioxygenase activity	6.67E-03
30	GO:0008375: acetylglucosaminyltransferase activity	7.20E-03
31	GO:0004222: metalloendopeptidase activity	8.60E-03
32	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	8.88E-03
33	GO:0016301: kinase activity	9.02E-03
34	GO:0003993: acid phosphatase activity	9.77E-03
35	GO:0035091: phosphatidylinositol binding	1.20E-02
36	GO:0015171: amino acid transmembrane transporter activity	1.50E-02
37	GO:0030246: carbohydrate binding	1.99E-02
38	GO:0016758: transferase activity, transferring hexosyl groups	2.06E-02
39	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.14E-02
40	GO:0030170: pyridoxal phosphate binding	2.27E-02
41	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.31E-02
42	GO:0005506: iron ion binding	2.95E-02
43	GO:0044212: transcription regulatory region DNA binding	3.00E-02
44	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.14E-02
45	GO:0005515: protein binding	3.24E-02
46	GO:0005215: transporter activity	3.32E-02
47	GO:0046982: protein heterodimerization activity	3.56E-02
48	GO:0016788: hydrolase activity, acting on ester bonds	3.66E-02
49	GO:0003682: chromatin binding	3.76E-02
50	GO:0046872: metal ion binding	3.92E-02
51	GO:0004497: monooxygenase activity	4.21E-02
52	GO:0004672: protein kinase activity	4.39E-02
53	GO:0020037: heme binding	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.51E-07
2	GO:0010008: endosome membrane	1.22E-04
3	GO:0016021: integral component of membrane	1.30E-04
4	GO:0071782: endoplasmic reticulum tubular network	3.01E-04
5	GO:0005794: Golgi apparatus	3.10E-04
6	GO:0005776: autophagosome	4.04E-04
7	GO:0000813: ESCRT I complex	5.13E-04
8	GO:0000164: protein phosphatase type 1 complex	5.13E-04
9	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.01E-03
10	GO:0005774: vacuolar membrane	1.73E-03
11	GO:0031410: cytoplasmic vesicle	3.41E-03
12	GO:0031965: nuclear membrane	4.94E-03
13	GO:0000145: exocyst	5.42E-03
14	GO:0005783: endoplasmic reticulum	5.91E-03
15	GO:0005667: transcription factor complex	7.20E-03
16	GO:0000325: plant-type vacuole	8.88E-03
17	GO:0000786: nucleosome	9.17E-03
18	GO:0005856: cytoskeleton	1.23E-02
19	GO:0016020: membrane	1.37E-02
20	GO:0005635: nuclear envelope	1.47E-02
21	GO:0005681: spliceosomal complex	1.57E-02
22	GO:0005802: trans-Golgi network	2.37E-02
23	GO:0009705: plant-type vacuole membrane	2.65E-02
24	GO:0005768: endosome	2.70E-02
25	GO:0000139: Golgi membrane	4.05E-02
26	GO:0005789: endoplasmic reticulum membrane	4.56E-02