co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G69340

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043487: regulation of RNA stability	0.00E+00
2	GO:0016236: macroautophagy	0.00E+00
3	GO:1902446: regulation of shade avoidance	0.00E+00
4	GO:0090306: spindle assembly involved in meiosis	0.00E+00
5	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	1.75E-06
6	GO:0051315: attachment of mitotic spindle microtubules to kinetochore	8.12E-06
7	GO:0030242: pexophagy	8.12E-06
8	GO:0007093: mitotic cell cycle checkpoint	8.12E-06
9	GO:0006406: mRNA export from nucleus	8.48E-06
10	GO:0034398: telomere tethering at nuclear periphery	2.19E-05
11	GO:0080119: ER body organization	6.14E-05
12	GO:0000973: posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery	6.14E-05
13	GO:0007004: telomere maintenance via telomerase	6.14E-05
14	GO:0045324: late endosome to vacuole transport	8.58E-05
15	GO:0007094: mitotic spindle assembly checkpoint	1.12E-04
16	GO:0007029: endoplasmic reticulum organization	1.12E-04
17	GO:0032876: negative regulation of DNA endoreduplication	1.12E-04
18	GO:0048232: male gamete generation	1.41E-04
19	GO:0042176: regulation of protein catabolic process	1.41E-04
20	GO:0008361: regulation of cell size	4.58E-04
21	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	4.98E-04
22	GO:0005986: sucrose biosynthetic process	4.98E-04
23	GO:0007030: Golgi organization	5.80E-04
24	GO:0006606: protein import into nucleus	9.85E-04
25	GO:0015991: ATP hydrolysis coupled proton transport	9.85E-04
26	GO:0019252: starch biosynthetic process	1.13E-03
27	GO:0006623: protein targeting to vacuole	1.13E-03
28	GO:0030163: protein catabolic process	1.29E-03
29	GO:0016579: protein deubiquitination	1.45E-03
30	GO:0006888: ER to Golgi vesicle-mediated transport	1.67E-03
31	GO:0016049: cell growth	1.73E-03
32	GO:0048767: root hair elongation	1.85E-03
33	GO:0009910: negative regulation of flower development	1.97E-03
34	GO:0045087: innate immune response	2.10E-03
35	GO:0006511: ubiquitin-dependent protein catabolic process	2.19E-03
36	GO:0006631: fatty acid metabolic process	2.36E-03
37	GO:0009926: auxin polar transport	2.49E-03
38	GO:0000209: protein polyubiquitination	2.56E-03
39	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.83E-03
40	GO:0009846: pollen germination	2.90E-03
41	GO:0006417: regulation of translation	3.26E-03
42	GO:0051726: regulation of cell cycle	4.02E-03
43	GO:0000398: mRNA splicing, via spliceosome	4.26E-03
44	GO:0006886: intracellular protein transport	1.02E-02
45	GO:0009751: response to salicylic acid	1.15E-02
46	GO:0006397: mRNA processing	1.20E-02
47	GO:0009555: pollen development	1.74E-02
48	GO:0051301: cell division	1.85E-02
49	GO:0015031: protein transport	3.42E-02
50	GO:0006810: transport	3.79E-02

Rank	GO Term	Adjusted P value
1	GO:0008240: tripeptidyl-peptidase activity	0.00E+00
2	GO:0010013: N-1-naphthylphthalamic acid binding	8.12E-06
3	GO:0043021: ribonucleoprotein complex binding	2.19E-05
4	GO:0070034: telomerase RNA binding	2.19E-05
5	GO:0003995: acyl-CoA dehydrogenase activity	8.58E-05
6	GO:0042162: telomeric DNA binding	2.04E-04
7	GO:0017056: structural constituent of nuclear pore	2.37E-04
8	GO:0005487: nucleocytoplasmic transporter activity	3.43E-04
9	GO:0030234: enzyme regulator activity	3.81E-04
10	GO:0004177: aminopeptidase activity	4.19E-04
11	GO:0008139: nuclear localization sequence binding	4.98E-04
12	GO:0004535: poly(A)-specific ribonuclease activity	5.39E-04
13	GO:0031624: ubiquitin conjugating enzyme binding	5.39E-04
14	GO:0043130: ubiquitin binding	6.66E-04
15	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	7.53E-04
16	GO:0004540: ribonuclease activity	7.53E-04
17	GO:0003723: RNA binding	7.67E-04
18	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.18E-03
19	GO:0005215: transporter activity	3.57E-03
20	GO:0016874: ligase activity	3.71E-03
21	GO:0003729: mRNA binding	4.79E-03
22	GO:0050660: flavin adenine dinucleotide binding	8.41E-03
23	GO:0061630: ubiquitin protein ligase activity	9.14E-03
24	GO:0003924: GTPase activity	1.16E-02
25	GO:0005516: calmodulin binding	2.33E-02
26	GO:0005525: GTP binding	2.48E-02
27	GO:0016491: oxidoreductase activity	3.51E-02
28	GO:0004842: ubiquitin-protein transferase activity	3.63E-02
29	GO:0004672: protein kinase activity	3.79E-02
30	GO:0005515: protein binding	4.19E-02
31	GO:0016787: hydrolase activity	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0005684: U2-type spliceosomal complex	0.00E+00
2	GO:0071561: nucleus-vacuole junction	0.00E+00
3	GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I	8.12E-06
4	GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II	8.12E-06
5	GO:0005697: telomerase holoenzyme complex	2.19E-05
6	GO:0044614: nuclear pore cytoplasmic filaments	3.99E-05
7	GO:0000932: P-body	4.09E-05
8	GO:0000776: kinetochore	1.12E-04
9	GO:0072686: mitotic spindle	1.12E-04
10	GO:0030127: COPII vesicle coat	1.41E-04
11	GO:0005635: nuclear envelope	1.46E-04
12	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	2.04E-04
13	GO:0008540: proteasome regulatory particle, base subcomplex	3.43E-04
14	GO:0005686: U2 snRNP	3.81E-04
15	GO:0005634: nucleus	7.18E-04
16	GO:0005770: late endosome	1.03E-03
17	GO:0031965: nuclear membrane	1.13E-03
18	GO:0005774: vacuolar membrane	1.62E-03
19	GO:0000151: ubiquitin ligase complex	1.79E-03
20	GO:0005643: nuclear pore	1.79E-03
21	GO:0000325: plant-type vacuole	1.97E-03
22	GO:0031902: late endosome membrane	2.36E-03
23	GO:0000502: proteasome complex	3.04E-03
24	GO:0005829: cytosol	4.16E-03
25	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	8.10E-03
26	GO:0005794: Golgi apparatus	1.30E-02
27	GO:0022626: cytosolic ribosome	1.69E-02
28	GO:0005773: vacuole	1.71E-02
29	GO:0005777: peroxisome	1.92E-02
30	GO:0005737: cytoplasm	3.53E-02
31	GO:0000139: Golgi membrane	3.58E-02
32	GO:0005789: endoplasmic reticulum membrane	3.90E-02
33	GO:0009506: plasmodesma	4.27E-02