co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G68560

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018160: peptidyl-pyrromethane cofactor linkage	0.00E+00
2	GO:0007172: signal complex assembly	0.00E+00
3	GO:0090627: plant epidermal cell differentiation	0.00E+00
4	GO:0015995: chlorophyll biosynthetic process	8.03E-10
5	GO:0006783: heme biosynthetic process	5.82E-08
6	GO:0006782: protoporphyrinogen IX biosynthetic process	1.10E-07
7	GO:0010206: photosystem II repair	1.30E-05
8	GO:0006898: receptor-mediated endocytosis	7.28E-05
9	GO:0010541: acropetal auxin transport	7.28E-05
10	GO:0006432: phenylalanyl-tRNA aminoacylation	7.28E-05
11	GO:0010160: formation of animal organ boundary	1.27E-04
12	GO:0016045: detection of bacterium	1.27E-04
13	GO:0010359: regulation of anion channel activity	1.27E-04
14	GO:0080055: low-affinity nitrate transport	1.27E-04
15	GO:0051513: regulation of monopolar cell growth	1.89E-04
16	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.89E-04
17	GO:0009913: epidermal cell differentiation	4.06E-04
18	GO:0060918: auxin transport	4.06E-04
19	GO:0009942: longitudinal axis specification	4.86E-04
20	GO:0009926: auxin polar transport	4.87E-04
21	GO:0050829: defense response to Gram-negative bacterium	5.68E-04
22	GO:0009787: regulation of abscisic acid-activated signaling pathway	6.55E-04
23	GO:0007389: pattern specification process	7.44E-04
24	GO:0009245: lipid A biosynthetic process	8.35E-04
25	GO:0006779: porphyrin-containing compound biosynthetic process	9.29E-04
26	GO:0010015: root morphogenesis	1.13E-03
27	GO:0052544: defense response by callose deposition in cell wall	1.13E-03
28	GO:1903507: negative regulation of nucleic acid-templated transcription	1.13E-03
29	GO:0008361: regulation of cell size	1.23E-03
30	GO:0010540: basipetal auxin transport	1.45E-03
31	GO:0009934: regulation of meristem structural organization	1.45E-03
32	GO:0010207: photosystem II assembly	1.45E-03
33	GO:0007623: circadian rhythm	1.53E-03
34	GO:2000377: regulation of reactive oxygen species metabolic process	1.79E-03
35	GO:0007017: microtubule-based process	1.92E-03
36	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.17E-03
37	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.30E-03
38	GO:0048443: stamen development	2.43E-03
39	GO:0042335: cuticle development	2.70E-03
40	GO:0009741: response to brassinosteroid	2.84E-03
41	GO:0009958: positive gravitropism	2.84E-03
42	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.99E-03
43	GO:0048825: cotyledon development	3.13E-03
44	GO:0010583: response to cyclopentenone	3.43E-03
45	GO:0016032: viral process	3.43E-03
46	GO:0030163: protein catabolic process	3.58E-03
47	GO:0010252: auxin homeostasis	3.73E-03
48	GO:0009639: response to red or far red light	3.73E-03
49	GO:0009828: plant-type cell wall loosening	3.73E-03
50	GO:0048364: root development	4.43E-03
51	GO:0009627: systemic acquired resistance	4.54E-03
52	GO:0010218: response to far red light	5.40E-03
53	GO:0048527: lateral root development	5.58E-03
54	GO:0009637: response to blue light	5.94E-03
55	GO:0009734: auxin-activated signaling pathway	5.97E-03
56	GO:0009737: response to abscisic acid	6.47E-03
57	GO:0009735: response to cytokinin	6.87E-03
58	GO:0009640: photomorphogenesis	7.08E-03
59	GO:0031347: regulation of defense response	8.09E-03
60	GO:0009664: plant-type cell wall organization	8.29E-03
61	GO:0006468: protein phosphorylation	8.58E-03
62	GO:0006857: oligopeptide transport	9.14E-03
63	GO:0055085: transmembrane transport	9.54E-03
64	GO:0006508: proteolysis	1.03E-02
65	GO:0009740: gibberellic acid mediated signaling pathway	1.07E-02
66	GO:0042545: cell wall modification	1.09E-02
67	GO:0009845: seed germination	1.38E-02
68	GO:0071555: cell wall organization	1.53E-02
69	GO:0042742: defense response to bacterium	1.53E-02
70	GO:0006633: fatty acid biosynthetic process	1.54E-02
71	GO:0045490: pectin catabolic process	1.64E-02
72	GO:0009739: response to gibberellin	1.78E-02
73	GO:0007166: cell surface receptor signaling pathway	1.81E-02
74	GO:0009826: unidimensional cell growth	2.18E-02
75	GO:0009658: chloroplast organization	2.24E-02
76	GO:0005975: carbohydrate metabolic process	2.32E-02
77	GO:0080167: response to karrikin	2.61E-02
78	GO:0015979: photosynthesis	2.87E-02
79	GO:0045892: negative regulation of transcription, DNA-templated	3.00E-02
80	GO:0032259: methylation	3.34E-02

Rank	GO Term	Adjusted P value
1	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
2	GO:0004853: uroporphyrinogen decarboxylase activity	0.00E+00
3	GO:0004418: hydroxymethylbilane synthase activity	0.00E+00
4	GO:0010329: auxin efflux transmembrane transporter activity	3.28E-05
5	GO:0004826: phenylalanine-tRNA ligase activity	7.28E-05
6	GO:0080054: low-affinity nitrate transmembrane transporter activity	1.27E-04
7	GO:0090729: toxin activity	1.27E-04
8	GO:0031177: phosphopantetheine binding	4.06E-04
9	GO:0000035: acyl binding	4.86E-04
10	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	6.55E-04
11	GO:0004650: polygalacturonase activity	8.34E-04
12	GO:0009672: auxin:proton symporter activity	9.29E-04
13	GO:0000049: tRNA binding	1.23E-03
14	GO:0004252: serine-type endopeptidase activity	1.24E-03
15	GO:0031072: heat shock protein binding	1.34E-03
16	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.43E-03
17	GO:0003714: transcription corepressor activity	1.79E-03
18	GO:0033612: receptor serine/threonine kinase binding	2.04E-03
19	GO:0003756: protein disulfide isomerase activity	2.43E-03
20	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.89E-03
21	GO:0005200: structural constituent of cytoskeleton	3.89E-03
22	GO:0008236: serine-type peptidase activity	4.88E-03
23	GO:0005096: GTPase activator activity	5.22E-03
24	GO:0005515: protein binding	5.51E-03
25	GO:0004712: protein serine/threonine/tyrosine kinase activity	6.31E-03
26	GO:0043621: protein self-association	7.48E-03
27	GO:0016301: kinase activity	8.13E-03
28	GO:0003777: microtubule motor activity	9.36E-03
29	GO:0045330: aspartyl esterase activity	9.36E-03
30	GO:0030599: pectinesterase activity	1.07E-02
31	GO:0051082: unfolded protein binding	1.12E-02
32	GO:0016829: lyase activity	1.38E-02
33	GO:0046910: pectinesterase inhibitor activity	1.56E-02
34	GO:0005215: transporter activity	1.69E-02
35	GO:0004674: protein serine/threonine kinase activity	1.88E-02
36	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.95E-02
37	GO:0005524: ATP binding	1.97E-02
38	GO:0042803: protein homodimerization activity	3.07E-02
39	GO:0003924: GTPase activity	3.45E-02
40	GO:0008289: lipid binding	4.36E-02

Rank	GO Term	Adjusted P value
1	GO:0098572: stromal side of plastid thylakoid membrane	0.00E+00
2	GO:0009570: chloroplast stroma	7.01E-06
3	GO:0009534: chloroplast thylakoid	1.28E-05
4	GO:0009507: chloroplast	1.43E-05
5	GO:0009941: chloroplast envelope	2.27E-05
6	GO:0009535: chloroplast thylakoid membrane	2.74E-05
7	GO:0009543: chloroplast thylakoid lumen	7.85E-05
8	GO:0016020: membrane	2.45E-04
9	GO:0009533: chloroplast stromal thylakoid	5.68E-04
10	GO:0042644: chloroplast nucleoid	8.35E-04
11	GO:0045298: tubulin complex	8.35E-04
12	GO:0009508: plastid chromosome	1.34E-03
13	GO:0031969: chloroplast membrane	2.89E-03
14	GO:0009522: photosystem I	2.99E-03
15	GO:0005618: cell wall	3.11E-03
16	GO:0009505: plant-type cell wall	3.31E-03
17	GO:0071944: cell periphery	3.58E-03
18	GO:0009295: nucleoid	3.89E-03
19	GO:0005576: extracellular region	4.38E-03
20	GO:0000325: plant-type vacuole	5.58E-03
21	GO:0031977: thylakoid lumen	6.69E-03
22	GO:0010008: endosome membrane	1.00E-02
23	GO:0005759: mitochondrial matrix	1.54E-02
24	GO:0009506: plasmodesma	1.93E-02
25	GO:0005874: microtubule	2.55E-02