Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G68100

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042789: mRNA transcription from RNA polymerase II promoter0.00E+00
2GO:0070827: chromatin maintenance0.00E+00
3GO:0048358: mucilage pectin biosynthetic process5.43E-06
4GO:0010393: galacturonan metabolic process5.43E-06
5GO:0034728: nucleosome organization5.43E-06
6GO:0071217: cellular response to external biotic stimulus1.49E-05
7GO:0046898: response to cycloheximide1.49E-05
8GO:0050684: regulation of mRNA processing1.49E-05
9GO:0048255: mRNA stabilization1.49E-05
10GO:0032784: regulation of DNA-templated transcription, elongation2.75E-05
11GO:0010272: response to silver ion2.75E-05
12GO:0008219: cell death3.17E-05
13GO:0080001: mucilage extrusion from seed coat4.27E-05
14GO:0032968: positive regulation of transcription elongation from RNA polymerase II promoter5.99E-05
15GO:0016973: poly(A)+ mRNA export from nucleus7.90E-05
16GO:1902183: regulation of shoot apical meristem development7.90E-05
17GO:0048359: mucilage metabolic process involved in seed coat development7.90E-05
18GO:0006139: nucleobase-containing compound metabolic process9.99E-05
19GO:0047484: regulation of response to osmotic stress9.99E-05
20GO:1901001: negative regulation of response to salt stress1.22E-04
21GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway1.46E-04
22GO:0006333: chromatin assembly or disassembly1.46E-04
23GO:1902074: response to salt1.46E-04
24GO:0045995: regulation of embryonic development1.46E-04
25GO:0006368: transcription elongation from RNA polymerase II promoter1.46E-04
26GO:0016559: peroxisome fission1.70E-04
27GO:0010204: defense response signaling pathway, resistance gene-independent1.96E-04
28GO:0009827: plant-type cell wall modification1.96E-04
29GO:2000024: regulation of leaf development2.22E-04
30GO:0016571: histone methylation2.49E-04
31GO:0009870: defense response signaling pathway, resistance gene-dependent2.77E-04
32GO:0043069: negative regulation of programmed cell death2.77E-04
33GO:0016441: posttranscriptional gene silencing2.77E-04
34GO:0010192: mucilage biosynthetic process2.77E-04
35GO:0006352: DNA-templated transcription, initiation3.06E-04
36GO:0030148: sphingolipid biosynthetic process3.06E-04
37GO:0000266: mitochondrial fission3.35E-04
38GO:0007049: cell cycle3.66E-04
39GO:0007031: peroxisome organization4.26E-04
40GO:0009944: polarity specification of adaxial/abaxial axis4.90E-04
41GO:0010073: meristem maintenance5.23E-04
42GO:0009693: ethylene biosynthetic process6.23E-04
43GO:0006342: chromatin silencing7.65E-04
44GO:0006357: regulation of transcription from RNA polymerase II promoter7.74E-04
45GO:0009791: post-embryonic development8.38E-04
46GO:0001666: response to hypoxia1.11E-03
47GO:0009816: defense response to bacterium, incompatible interaction1.15E-03
48GO:0006974: cellular response to DNA damage stimulus1.19E-03
49GO:0009910: negative regulation of flower development1.44E-03
50GO:0045087: innate immune response1.53E-03
51GO:0042742: defense response to bacterium2.01E-03
52GO:0030154: cell differentiation2.19E-03
53GO:0009909: regulation of flower development2.37E-03
54GO:0009620: response to fungus2.64E-03
55GO:0009624: response to nematode2.80E-03
56GO:0009790: embryo development3.63E-03
57GO:0010150: leaf senescence4.06E-03
58GO:0010228: vegetative to reproductive phase transition of meristem4.19E-03
59GO:0008380: RNA splicing4.58E-03
60GO:0009617: response to bacterium4.58E-03
61GO:0045892: negative regulation of transcription, DNA-templated7.28E-03
62GO:0006281: DNA repair8.33E-03
63GO:0006397: mRNA processing8.58E-03
64GO:0006952: defense response1.10E-02
65GO:0009908: flower development1.16E-02
66GO:0009738: abscisic acid-activated signaling pathway1.22E-02
67GO:0009555: pollen development1.25E-02
68GO:0009611: response to wounding1.27E-02
69GO:0051301: cell division1.33E-02
70GO:0045893: positive regulation of transcription, DNA-templated1.38E-02
71GO:0006414: translational elongation1.66E-02
72GO:0009414: response to water deprivation2.02E-02
73GO:0006979: response to oxidative stress2.07E-02
74GO:0009733: response to auxin2.24E-02
75GO:0006351: transcription, DNA-templated2.94E-02
76GO:0007275: multicellular organism development3.34E-02
77GO:0009793: embryo development ending in seed dormancy3.75E-02
78GO:0016310: phosphorylation3.91E-02
79GO:0050832: defense response to fungus4.48E-02
80GO:0006355: regulation of transcription, DNA-templated4.89E-02
RankGO TermAdjusted P value
1GO:0000991: transcription factor activity, core RNA polymerase II binding0.00E+00
2GO:0017091: AU-rich element binding5.43E-06
3GO:0017050: D-erythro-sphingosine kinase activity2.75E-05
4GO:0031491: nucleosome binding1.22E-04
5GO:0004143: diacylglycerol kinase activity1.46E-04
6GO:0003951: NAD+ kinase activity1.96E-04
7GO:0003713: transcription coactivator activity7.65E-04
8GO:0005515: protein binding1.20E-03
9GO:0003746: translation elongation factor activity1.53E-03
10GO:0042393: histone binding1.67E-03
11GO:0003729: mRNA binding2.97E-03
12GO:0008017: microtubule binding4.19E-03
13GO:0003700: transcription factor activity, sequence-specific DNA binding6.68E-03
14GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting7.20E-03
15GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding7.76E-03
16GO:0003924: GTPase activity8.33E-03
17GO:0003677: DNA binding8.47E-03
18GO:0000166: nucleotide binding1.25E-02
19GO:0003723: RNA binding1.55E-02
20GO:0005525: GTP binding1.78E-02
21GO:0044212: transcription regulatory region DNA binding2.06E-02
RankGO TermAdjusted P value
1GO:0035327: transcriptionally active chromatin5.43E-06
2GO:0008023: transcription elongation factor complex5.43E-06
3GO:0005783: endoplasmic reticulum2.10E-03
4GO:0005681: spliceosomal complex2.48E-03
5GO:0005654: nucleoplasm3.21E-03
6GO:0005634: nucleus6.78E-03
7GO:0005777: peroxisome1.38E-02
8GO:0005730: nucleolus3.00E-02
9GO:0005829: cytosol3.13E-02
Gene type



Gene DE type