co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G68050

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010378: temperature compensation of the circadian clock	0.00E+00
2	GO:0000390: spliceosomal complex disassembly	0.00E+00
3	GO:0010730: negative regulation of hydrogen peroxide biosynthetic process	0.00E+00
4	GO:0046473: phosphatidic acid metabolic process	0.00E+00
5	GO:0009409: response to cold	2.18E-10
6	GO:0009737: response to abscisic acid	3.61E-08
7	GO:0009415: response to water	4.21E-07
8	GO:0009414: response to water deprivation	2.13E-06
9	GO:0007623: circadian rhythm	6.45E-06
10	GO:0000380: alternative mRNA splicing, via spliceosome	1.28E-05
11	GO:0098869: cellular oxidant detoxification	3.77E-05
12	GO:0009609: response to symbiotic bacterium	9.14E-05
13	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	9.14E-05
14	GO:0032958: inositol phosphate biosynthetic process	9.14E-05
15	GO:0009631: cold acclimation	1.18E-04
16	GO:0009651: response to salt stress	1.30E-04
17	GO:0042542: response to hydrogen peroxide	1.82E-04
18	GO:0009660: amyloplast organization	2.16E-04
19	GO:0010353: response to trehalose	2.16E-04
20	GO:0009269: response to desiccation	3.47E-04
21	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	3.61E-04
22	GO:0042256: mature ribosome assembly	3.61E-04
23	GO:0042344: indole glucosinolate catabolic process	3.61E-04
24	GO:0016255: attachment of GPI anchor to protein	3.61E-04
25	GO:0042780: tRNA 3'-end processing	3.61E-04
26	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.87E-04
27	GO:0006020: inositol metabolic process	5.20E-04
28	GO:0010601: positive regulation of auxin biosynthetic process	5.20E-04
29	GO:0015749: monosaccharide transport	5.20E-04
30	GO:0042752: regulation of circadian rhythm	6.07E-04
31	GO:0015743: malate transport	6.90E-04
32	GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain	6.90E-04
33	GO:0006646: phosphatidylethanolamine biosynthetic process	6.90E-04
34	GO:0048578: positive regulation of long-day photoperiodism, flowering	8.73E-04
35	GO:0043097: pyrimidine nucleoside salvage	8.73E-04
36	GO:0097428: protein maturation by iron-sulfur cluster transfer	8.73E-04
37	GO:0010286: heat acclimation	8.83E-04
38	GO:0010029: regulation of seed germination	1.04E-03
39	GO:0009959: negative gravitropism	1.07E-03
40	GO:0006206: pyrimidine nucleobase metabolic process	1.07E-03
41	GO:0045040: protein import into mitochondrial outer membrane	1.07E-03
42	GO:0033365: protein localization to organelle	1.07E-03
43	GO:0010555: response to mannitol	1.27E-03
44	GO:0009817: defense response to fungus, incompatible interaction	1.27E-03
45	GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity	1.27E-03
46	GO:0045926: negative regulation of growth	1.27E-03
47	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.27E-03
48	GO:0010043: response to zinc ion	1.46E-03
49	GO:0009610: response to symbiotic fungus	1.49E-03
50	GO:0045995: regulation of embryonic development	1.49E-03
51	GO:0046470: phosphatidylcholine metabolic process	1.49E-03
52	GO:0048437: floral organ development	1.49E-03
53	GO:1902074: response to salt	1.49E-03
54	GO:0045087: innate immune response	1.60E-03
55	GO:0006970: response to osmotic stress	1.70E-03
56	GO:0009819: drought recovery	1.72E-03
57	GO:0032508: DNA duplex unwinding	1.72E-03
58	GO:0001510: RNA methylation	1.96E-03
59	GO:0019432: triglyceride biosynthetic process	2.21E-03
60	GO:0090333: regulation of stomatal closure	2.21E-03
61	GO:0046916: cellular transition metal ion homeostasis	2.21E-03
62	GO:0005982: starch metabolic process	2.48E-03
63	GO:2000280: regulation of root development	2.48E-03
64	GO:0042538: hyperosmotic salinity response	2.56E-03
65	GO:0031627: telomeric loop formation	2.75E-03
66	GO:0009970: cellular response to sulfate starvation	2.75E-03
67	GO:0006995: cellular response to nitrogen starvation	2.75E-03
68	GO:0009682: induced systemic resistance	3.03E-03
69	GO:0052544: defense response by callose deposition in cell wall	3.03E-03
70	GO:0007165: signal transduction	3.10E-03
71	GO:0012501: programmed cell death	3.32E-03
72	GO:0005983: starch catabolic process	3.32E-03
73	GO:0006626: protein targeting to mitochondrion	3.63E-03
74	GO:0007034: vacuolar transport	3.93E-03
75	GO:0007033: vacuole organization	4.26E-03
76	GO:0010030: positive regulation of seed germination	4.26E-03
77	GO:0006071: glycerol metabolic process	4.58E-03
78	GO:0006406: mRNA export from nucleus	4.92E-03
79	GO:0016575: histone deacetylation	5.27E-03
80	GO:0048278: vesicle docking	5.62E-03
81	GO:0009738: abscisic acid-activated signaling pathway	6.61E-03
82	GO:0035556: intracellular signal transduction	7.38E-03
83	GO:0010118: stomatal movement	7.51E-03
84	GO:0000226: microtubule cytoskeleton organization	7.51E-03
85	GO:0010501: RNA secondary structure unwinding	7.51E-03
86	GO:0000413: protein peptidyl-prolyl isomerization	7.51E-03
87	GO:0046323: glucose import	7.91E-03
88	GO:0009617: response to bacterium	8.00E-03
89	GO:0045893: positive regulation of transcription, DNA-templated	8.22E-03
90	GO:0061025: membrane fusion	8.32E-03
91	GO:0009749: response to glucose	8.74E-03
92	GO:0008654: phospholipid biosynthetic process	8.74E-03
93	GO:0009556: microsporogenesis	8.74E-03
94	GO:0000302: response to reactive oxygen species	9.16E-03
95	GO:0019760: glucosinolate metabolic process	1.05E-02
96	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.23E-02
97	GO:0006906: vesicle fusion	1.28E-02
98	GO:0006950: response to stress	1.33E-02
99	GO:0006811: ion transport	1.54E-02
100	GO:0010218: response to far red light	1.54E-02
101	GO:0007568: aging	1.59E-02
102	GO:0010119: regulation of stomatal movement	1.59E-02
103	GO:0009637: response to blue light	1.69E-02
104	GO:0016042: lipid catabolic process	1.85E-02
105	GO:0030001: metal ion transport	1.86E-02
106	GO:0009644: response to high light intensity	2.14E-02
107	GO:0000165: MAPK cascade	2.32E-02
108	GO:0006812: cation transport	2.38E-02
109	GO:0009585: red, far-red light phototransduction	2.51E-02
110	GO:0046686: response to cadmium ion	2.94E-02
111	GO:0009735: response to cytokinin	3.09E-02
112	GO:0009553: embryo sac development	3.16E-02
113	GO:0006355: regulation of transcription, DNA-templated	3.23E-02
114	GO:0051726: regulation of cell cycle	3.36E-02
115	GO:0000398: mRNA splicing, via spliceosome	3.57E-02
116	GO:0009058: biosynthetic process	3.93E-02
117	GO:0042744: hydrogen peroxide catabolic process	4.15E-02
118	GO:0006457: protein folding	4.36E-02
119	GO:0006633: fatty acid biosynthetic process	4.45E-02
120	GO:0016036: cellular response to phosphate starvation	4.52E-02
121	GO:0010150: leaf senescence	4.75E-02
122	GO:0010228: vegetative to reproductive phase transition of meristem	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:1990446: U1 snRNP binding	0.00E+00
2	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
3	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
4	GO:0009679: hexose:proton symporter activity	9.14E-05
5	GO:0000829: inositol heptakisphosphate kinase activity	9.14E-05
6	GO:0050521: alpha-glucan, water dikinase activity	9.14E-05
7	GO:0046870: cadmium ion binding	9.14E-05
8	GO:0000828: inositol hexakisphosphate kinase activity	9.14E-05
9	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	9.14E-05
10	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	9.14E-05
11	GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters	2.16E-04
12	GO:0004609: phosphatidylserine decarboxylase activity	2.16E-04
13	GO:0004839: ubiquitin activating enzyme activity	2.16E-04
14	GO:0032791: lead ion binding	2.16E-04
15	GO:0042781: 3'-tRNA processing endoribonuclease activity	3.61E-04
16	GO:0004096: catalase activity	3.61E-04
17	GO:0005253: anion channel activity	6.90E-04
18	GO:0015145: monosaccharide transmembrane transporter activity	8.73E-04
19	GO:0008641: small protein activating enzyme activity	8.73E-04
20	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	8.73E-04
21	GO:2001070: starch binding	1.07E-03
22	GO:0004629: phospholipase C activity	1.07E-03
23	GO:0015562: efflux transmembrane transporter activity	1.07E-03
24	GO:0000293: ferric-chelate reductase activity	1.07E-03
25	GO:0019137: thioglucosidase activity	1.07E-03
26	GO:0004849: uridine kinase activity	1.27E-03
27	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.27E-03
28	GO:0004602: glutathione peroxidase activity	1.27E-03
29	GO:0004144: diacylglycerol O-acyltransferase activity	1.27E-03
30	GO:0004435: phosphatidylinositol phospholipase C activity	1.27E-03
31	GO:0015140: malate transmembrane transporter activity	1.49E-03
32	GO:0005515: protein binding	1.89E-03
33	GO:0004630: phospholipase D activity	1.96E-03
34	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	1.96E-03
35	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.96E-03
36	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.21E-03
37	GO:0003691: double-stranded telomeric DNA binding	3.03E-03
38	GO:0005509: calcium ion binding	3.44E-03
39	GO:0015266: protein channel activity	3.63E-03
40	GO:0051536: iron-sulfur cluster binding	4.92E-03
41	GO:0004407: histone deacetylase activity	4.92E-03
42	GO:0008324: cation transmembrane transporter activity	5.27E-03
43	GO:0004707: MAP kinase activity	5.62E-03
44	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	7.91E-03
45	GO:0008375: acetylglucosaminyltransferase activity	1.28E-02
46	GO:0102483: scopolin beta-glucosidase activity	1.33E-02
47	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.54E-02
48	GO:0050897: cobalt ion binding	1.59E-02
49	GO:0044212: transcription regulatory region DNA binding	1.69E-02
50	GO:0004722: protein serine/threonine phosphatase activity	1.69E-02
51	GO:0003697: single-stranded DNA binding	1.69E-02
52	GO:0008422: beta-glucosidase activity	1.80E-02
53	GO:0000149: SNARE binding	1.80E-02
54	GO:0005484: SNAP receptor activity	2.03E-02
55	GO:0005198: structural molecule activity	2.20E-02
56	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.26E-02
57	GO:0003690: double-stranded DNA binding	2.57E-02
58	GO:0015144: carbohydrate transmembrane transporter activity	4.30E-02
59	GO:0043565: sequence-specific DNA binding	4.44E-02
60	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.45E-02
61	GO:0005351: sugar:proton symporter activity	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0031981: nuclear lumen	0.00E+00
2	GO:0071008: U2-type post-mRNA release spliceosomal complex	0.00E+00
3	GO:0043036: starch grain	2.16E-04
4	GO:0005777: peroxisome	3.12E-04
5	GO:0042765: GPI-anchor transamidase complex	3.61E-04
6	GO:0005744: mitochondrial inner membrane presequence translocase complex	4.50E-04
7	GO:0015630: microtubule cytoskeleton	5.20E-04
8	GO:0030140: trans-Golgi network transport vesicle	1.07E-03
9	GO:0000815: ESCRT III complex	1.27E-03
10	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	1.96E-03
11	GO:0000783: nuclear telomere cap complex	1.96E-03
12	GO:0005742: mitochondrial outer membrane translocase complex	1.96E-03
13	GO:0005811: lipid particle	1.96E-03
14	GO:0005741: mitochondrial outer membrane	5.62E-03
15	GO:0009705: plant-type vacuole membrane	6.70E-03
16	GO:0005886: plasma membrane	7.81E-03
17	GO:0005770: late endosome	7.91E-03
18	GO:0031965: nuclear membrane	8.74E-03
19	GO:0009941: chloroplast envelope	1.28E-02
20	GO:0000325: plant-type vacuole	1.59E-02
21	GO:0000786: nucleosome	1.64E-02
22	GO:0005743: mitochondrial inner membrane	1.77E-02
23	GO:0031201: SNARE complex	1.91E-02
24	GO:0031902: late endosome membrane	1.91E-02
25	GO:0031966: mitochondrial membrane	2.38E-02
26	GO:0022626: cytosolic ribosome	3.24E-02
27	GO:0005654: nucleoplasm	3.71E-02
28	GO:0016020: membrane	4.31E-02