GO Enrichment Analysis of Co-expressed Genes with
AT1G66430
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:0008064: regulation of actin polymerization or depolymerization | 0.00E+00 |
| 4 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 5 | GO:0051493: regulation of cytoskeleton organization | 0.00E+00 |
| 6 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 7 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 8 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 9 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 10 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 11 | GO:0009658: chloroplast organization | 6.76E-07 |
| 12 | GO:0006412: translation | 2.05E-05 |
| 13 | GO:0010067: procambium histogenesis | 6.99E-05 |
| 14 | GO:0000413: protein peptidyl-prolyl isomerization | 7.63E-05 |
| 15 | GO:0042254: ribosome biogenesis | 1.15E-04 |
| 16 | GO:0032544: plastid translation | 1.50E-04 |
| 17 | GO:0006426: glycyl-tRNA aminoacylation | 1.62E-04 |
| 18 | GO:0042759: long-chain fatty acid biosynthetic process | 1.62E-04 |
| 19 | GO:0006430: lysyl-tRNA aminoacylation | 1.62E-04 |
| 20 | GO:0043971: histone H3-K18 acetylation | 1.62E-04 |
| 21 | GO:0006568: tryptophan metabolic process | 3.69E-04 |
| 22 | GO:0010270: photosystem II oxygen evolving complex assembly | 3.69E-04 |
| 23 | GO:0006695: cholesterol biosynthetic process | 3.69E-04 |
| 24 | GO:0010223: secondary shoot formation | 4.47E-04 |
| 25 | GO:0010020: chloroplast fission | 4.47E-04 |
| 26 | GO:0010025: wax biosynthetic process | 5.56E-04 |
| 27 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 6.04E-04 |
| 28 | GO:0090506: axillary shoot meristem initiation | 6.04E-04 |
| 29 | GO:0006418: tRNA aminoacylation for protein translation | 6.78E-04 |
| 30 | GO:0010088: phloem development | 8.63E-04 |
| 31 | GO:0006424: glutamyl-tRNA aminoacylation | 8.63E-04 |
| 32 | GO:0043572: plastid fission | 8.63E-04 |
| 33 | GO:2001141: regulation of RNA biosynthetic process | 8.63E-04 |
| 34 | GO:0006241: CTP biosynthetic process | 8.63E-04 |
| 35 | GO:0006165: nucleoside diphosphate phosphorylation | 8.63E-04 |
| 36 | GO:0006228: UTP biosynthetic process | 8.63E-04 |
| 37 | GO:0001944: vasculature development | 8.83E-04 |
| 38 | GO:0010089: xylem development | 9.56E-04 |
| 39 | GO:0042335: cuticle development | 1.11E-03 |
| 40 | GO:0051322: anaphase | 1.14E-03 |
| 41 | GO:0006183: GTP biosynthetic process | 1.14E-03 |
| 42 | GO:0045454: cell redox homeostasis | 1.35E-03 |
| 43 | GO:0032543: mitochondrial translation | 1.45E-03 |
| 44 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.45E-03 |
| 45 | GO:0006457: protein folding | 1.58E-03 |
| 46 | GO:0042549: photosystem II stabilization | 1.78E-03 |
| 47 | GO:0010358: leaf shaping | 1.78E-03 |
| 48 | GO:0016554: cytidine to uridine editing | 1.78E-03 |
| 49 | GO:0006828: manganese ion transport | 1.78E-03 |
| 50 | GO:0032973: amino acid export | 1.78E-03 |
| 51 | GO:0010027: thylakoid membrane organization | 2.10E-03 |
| 52 | GO:0048280: vesicle fusion with Golgi apparatus | 2.14E-03 |
| 53 | GO:0010555: response to mannitol | 2.14E-03 |
| 54 | GO:0015995: chlorophyll biosynthetic process | 2.47E-03 |
| 55 | GO:0045995: regulation of embryonic development | 2.52E-03 |
| 56 | GO:0048528: post-embryonic root development | 2.52E-03 |
| 57 | GO:0043090: amino acid import | 2.52E-03 |
| 58 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.52E-03 |
| 59 | GO:0048481: plant ovule development | 2.74E-03 |
| 60 | GO:0000028: ribosomal small subunit assembly | 2.91E-03 |
| 61 | GO:0010928: regulation of auxin mediated signaling pathway | 2.91E-03 |
| 62 | GO:0009819: drought recovery | 2.91E-03 |
| 63 | GO:0009642: response to light intensity | 2.91E-03 |
| 64 | GO:0044030: regulation of DNA methylation | 3.33E-03 |
| 65 | GO:0071482: cellular response to light stimulus | 3.33E-03 |
| 66 | GO:0009657: plastid organization | 3.33E-03 |
| 67 | GO:0080144: amino acid homeostasis | 3.77E-03 |
| 68 | GO:0033384: geranyl diphosphate biosynthetic process | 3.77E-03 |
| 69 | GO:0045337: farnesyl diphosphate biosynthetic process | 3.77E-03 |
| 70 | GO:0042761: very long-chain fatty acid biosynthetic process | 4.22E-03 |
| 71 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.22E-03 |
| 72 | GO:1900865: chloroplast RNA modification | 4.22E-03 |
| 73 | GO:0006896: Golgi to vacuole transport | 4.69E-03 |
| 74 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.69E-03 |
| 75 | GO:0009793: embryo development ending in seed dormancy | 4.70E-03 |
| 76 | GO:0006415: translational termination | 5.19E-03 |
| 77 | GO:0043085: positive regulation of catalytic activity | 5.19E-03 |
| 78 | GO:0006352: DNA-templated transcription, initiation | 5.19E-03 |
| 79 | GO:0006816: calcium ion transport | 5.19E-03 |
| 80 | GO:0009773: photosynthetic electron transport in photosystem I | 5.19E-03 |
| 81 | GO:0045037: protein import into chloroplast stroma | 5.69E-03 |
| 82 | GO:0006813: potassium ion transport | 5.99E-03 |
| 83 | GO:0015979: photosynthesis | 6.55E-03 |
| 84 | GO:0010207: photosystem II assembly | 6.76E-03 |
| 85 | GO:0080188: RNA-directed DNA methylation | 7.32E-03 |
| 86 | GO:0006869: lipid transport | 7.82E-03 |
| 87 | GO:0007010: cytoskeleton organization | 8.48E-03 |
| 88 | GO:0019344: cysteine biosynthetic process | 8.48E-03 |
| 89 | GO:0000027: ribosomal large subunit assembly | 8.48E-03 |
| 90 | GO:0007017: microtubule-based process | 9.09E-03 |
| 91 | GO:0016226: iron-sulfur cluster assembly | 1.04E-02 |
| 92 | GO:0080092: regulation of pollen tube growth | 1.04E-02 |
| 93 | GO:0009411: response to UV | 1.10E-02 |
| 94 | GO:0019722: calcium-mediated signaling | 1.17E-02 |
| 95 | GO:0016117: carotenoid biosynthetic process | 1.24E-02 |
| 96 | GO:0042147: retrograde transport, endosome to Golgi | 1.24E-02 |
| 97 | GO:0009790: embryo development | 1.25E-02 |
| 98 | GO:0010087: phloem or xylem histogenesis | 1.31E-02 |
| 99 | GO:0000226: microtubule cytoskeleton organization | 1.31E-02 |
| 100 | GO:0008360: regulation of cell shape | 1.38E-02 |
| 101 | GO:0009958: positive gravitropism | 1.38E-02 |
| 102 | GO:0006662: glycerol ether metabolic process | 1.38E-02 |
| 103 | GO:0009741: response to brassinosteroid | 1.38E-02 |
| 104 | GO:0010268: brassinosteroid homeostasis | 1.38E-02 |
| 105 | GO:0007018: microtubule-based movement | 1.45E-02 |
| 106 | GO:0006623: protein targeting to vacuole | 1.52E-02 |
| 107 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.60E-02 |
| 108 | GO:0016132: brassinosteroid biosynthetic process | 1.60E-02 |
| 109 | GO:0007264: small GTPase mediated signal transduction | 1.67E-02 |
| 110 | GO:0009735: response to cytokinin | 1.68E-02 |
| 111 | GO:0016125: sterol metabolic process | 1.83E-02 |
| 112 | GO:0007267: cell-cell signaling | 1.91E-02 |
| 113 | GO:0071805: potassium ion transmembrane transport | 1.91E-02 |
| 114 | GO:0000910: cytokinesis | 1.99E-02 |
| 115 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.33E-02 |
| 116 | GO:0006811: ion transport | 2.69E-02 |
| 117 | GO:0048366: leaf development | 2.70E-02 |
| 118 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.94E-02 |
| 119 | GO:0009867: jasmonic acid mediated signaling pathway | 2.97E-02 |
| 120 | GO:0009637: response to blue light | 2.97E-02 |
| 121 | GO:0034599: cellular response to oxidative stress | 3.06E-02 |
| 122 | GO:0042542: response to hydrogen peroxide | 3.45E-02 |
| 123 | GO:0008283: cell proliferation | 3.55E-02 |
| 124 | GO:0010114: response to red light | 3.55E-02 |
| 125 | GO:0009585: red, far-red light phototransduction | 4.39E-02 |
| 126 | GO:0042742: defense response to bacterium | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 2 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 3 | GO:0005048: signal sequence binding | 0.00E+00 |
| 4 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 5 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 6 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 7 | GO:0019843: rRNA binding | 1.57E-09 |
| 8 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.15E-07 |
| 9 | GO:0003735: structural constituent of ribosome | 1.70E-07 |
| 10 | GO:0051920: peroxiredoxin activity | 6.99E-05 |
| 11 | GO:0016209: antioxidant activity | 1.20E-04 |
| 12 | GO:0004820: glycine-tRNA ligase activity | 1.62E-04 |
| 13 | GO:0010012: steroid 22-alpha hydroxylase activity | 1.62E-04 |
| 14 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.62E-04 |
| 15 | GO:0004824: lysine-tRNA ligase activity | 1.62E-04 |
| 16 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.62E-04 |
| 17 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 3.02E-04 |
| 18 | GO:0008017: microtubule binding | 4.11E-04 |
| 19 | GO:0030267: glyoxylate reductase (NADP) activity | 6.04E-04 |
| 20 | GO:0002161: aminoacyl-tRNA editing activity | 6.04E-04 |
| 21 | GO:0016149: translation release factor activity, codon specific | 8.63E-04 |
| 22 | GO:0004550: nucleoside diphosphate kinase activity | 8.63E-04 |
| 23 | GO:0008097: 5S rRNA binding | 8.63E-04 |
| 24 | GO:0001872: (1->3)-beta-D-glucan binding | 8.63E-04 |
| 25 | GO:0004812: aminoacyl-tRNA ligase activity | 1.03E-03 |
| 26 | GO:0001053: plastid sigma factor activity | 1.14E-03 |
| 27 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 1.14E-03 |
| 28 | GO:0016987: sigma factor activity | 1.14E-03 |
| 29 | GO:1990137: plant seed peroxidase activity | 1.14E-03 |
| 30 | GO:0010385: double-stranded methylated DNA binding | 1.14E-03 |
| 31 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.45E-03 |
| 32 | GO:0008237: metallopeptidase activity | 1.88E-03 |
| 33 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.14E-03 |
| 34 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.14E-03 |
| 35 | GO:0016831: carboxy-lyase activity | 2.52E-03 |
| 36 | GO:0004033: aldo-keto reductase (NADP) activity | 2.91E-03 |
| 37 | GO:0008312: 7S RNA binding | 2.91E-03 |
| 38 | GO:0004222: metalloendopeptidase activity | 3.01E-03 |
| 39 | GO:0003747: translation release factor activity | 3.77E-03 |
| 40 | GO:0004337: geranyltranstransferase activity | 3.77E-03 |
| 41 | GO:0005384: manganese ion transmembrane transporter activity | 4.22E-03 |
| 42 | GO:0008047: enzyme activator activity | 4.69E-03 |
| 43 | GO:0043621: protein self-association | 4.81E-03 |
| 44 | GO:0004161: dimethylallyltranstransferase activity | 5.19E-03 |
| 45 | GO:0000049: tRNA binding | 5.69E-03 |
| 46 | GO:0015095: magnesium ion transmembrane transporter activity | 6.22E-03 |
| 47 | GO:0003777: microtubule motor activity | 6.63E-03 |
| 48 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 7.31E-03 |
| 49 | GO:0051536: iron-sulfur cluster binding | 8.48E-03 |
| 50 | GO:0005528: FK506 binding | 8.48E-03 |
| 51 | GO:0003924: GTPase activity | 9.08E-03 |
| 52 | GO:0015079: potassium ion transmembrane transporter activity | 9.09E-03 |
| 53 | GO:0008324: cation transmembrane transporter activity | 9.09E-03 |
| 54 | GO:0004176: ATP-dependent peptidase activity | 9.72E-03 |
| 55 | GO:0033612: receptor serine/threonine kinase binding | 9.72E-03 |
| 56 | GO:0009055: electron carrier activity | 9.93E-03 |
| 57 | GO:0005509: calcium ion binding | 1.14E-02 |
| 58 | GO:0047134: protein-disulfide reductase activity | 1.24E-02 |
| 59 | GO:0005102: receptor binding | 1.24E-02 |
| 60 | GO:0008565: protein transporter activity | 1.28E-02 |
| 61 | GO:0004402: histone acetyltransferase activity | 1.31E-02 |
| 62 | GO:0008289: lipid binding | 1.38E-02 |
| 63 | GO:0004791: thioredoxin-disulfide reductase activity | 1.45E-02 |
| 64 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.75E-02 |
| 65 | GO:0005200: structural constituent of cytoskeleton | 1.91E-02 |
| 66 | GO:0004601: peroxidase activity | 2.29E-02 |
| 67 | GO:0030247: polysaccharide binding | 2.33E-02 |
| 68 | GO:0003729: mRNA binding | 2.34E-02 |
| 69 | GO:0016740: transferase activity | 2.41E-02 |
| 70 | GO:0008236: serine-type peptidase activity | 2.42E-02 |
| 71 | GO:0003746: translation elongation factor activity | 2.97E-02 |
| 72 | GO:0052689: carboxylic ester hydrolase activity | 3.14E-02 |
| 73 | GO:0000149: SNARE binding | 3.16E-02 |
| 74 | GO:0042393: histone binding | 3.26E-02 |
| 75 | GO:0005525: GTP binding | 3.50E-02 |
| 76 | GO:0005484: SNAP receptor activity | 3.55E-02 |
| 77 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.76E-02 |
| 78 | GO:0005198: structural molecule activity | 3.86E-02 |
| 79 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.39E-02 |
| 80 | GO:0004519: endonuclease activity | 4.54E-02 |
| 81 | GO:0005524: ATP binding | 4.62E-02 |
| 82 | GO:0015171: amino acid transmembrane transporter activity | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070971: endoplasmic reticulum exit site | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 8.29E-26 |
| 3 | GO:0009570: chloroplast stroma | 1.15E-23 |
| 4 | GO:0009941: chloroplast envelope | 2.12E-18 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 1.24E-12 |
| 6 | GO:0031977: thylakoid lumen | 2.72E-11 |
| 7 | GO:0046658: anchored component of plasma membrane | 3.92E-07 |
| 8 | GO:0009579: thylakoid | 5.92E-07 |
| 9 | GO:0009535: chloroplast thylakoid membrane | 2.55E-06 |
| 10 | GO:0005840: ribosome | 6.08E-06 |
| 11 | GO:0000311: plastid large ribosomal subunit | 1.07E-05 |
| 12 | GO:0005874: microtubule | 1.73E-05 |
| 13 | GO:0009534: chloroplast thylakoid | 5.40E-05 |
| 14 | GO:0019898: extrinsic component of membrane | 1.06E-04 |
| 15 | GO:0009547: plastid ribosome | 1.62E-04 |
| 16 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.62E-04 |
| 17 | GO:0080085: signal recognition particle, chloroplast targeting | 3.69E-04 |
| 18 | GO:0000312: plastid small ribosomal subunit | 4.47E-04 |
| 19 | GO:0031225: anchored component of membrane | 5.36E-04 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 6.78E-04 |
| 21 | GO:0072686: mitotic spindle | 1.45E-03 |
| 22 | GO:0000793: condensed chromosome | 1.78E-03 |
| 23 | GO:0005762: mitochondrial large ribosomal subunit | 2.14E-03 |
| 24 | GO:0000794: condensed nuclear chromosome | 2.52E-03 |
| 25 | GO:0009533: chloroplast stromal thylakoid | 2.52E-03 |
| 26 | GO:0012507: ER to Golgi transport vesicle membrane | 2.91E-03 |
| 27 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 3.33E-03 |
| 28 | GO:0005811: lipid particle | 3.33E-03 |
| 29 | GO:0045298: tubulin complex | 3.77E-03 |
| 30 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.77E-03 |
| 31 | GO:0000922: spindle pole | 3.77E-03 |
| 32 | GO:0005819: spindle | 3.77E-03 |
| 33 | GO:0055028: cortical microtubule | 4.69E-03 |
| 34 | GO:0016324: apical plasma membrane | 4.69E-03 |
| 35 | GO:0009574: preprophase band | 6.22E-03 |
| 36 | GO:0030095: chloroplast photosystem II | 6.76E-03 |
| 37 | GO:0005875: microtubule associated complex | 7.90E-03 |
| 38 | GO:0009706: chloroplast inner membrane | 8.52E-03 |
| 39 | GO:0042651: thylakoid membrane | 9.09E-03 |
| 40 | GO:0009532: plastid stroma | 9.72E-03 |
| 41 | GO:0005871: kinesin complex | 1.24E-02 |
| 42 | GO:0009536: plastid | 1.76E-02 |
| 43 | GO:0009505: plant-type cell wall | 1.81E-02 |
| 44 | GO:0010319: stromule | 1.91E-02 |
| 45 | GO:0009295: nucleoid | 1.91E-02 |
| 46 | GO:0022627: cytosolic small ribosomal subunit | 1.96E-02 |
| 47 | GO:0005886: plasma membrane | 2.56E-02 |
| 48 | GO:0031969: chloroplast membrane | 2.84E-02 |
| 49 | GO:0022625: cytosolic large ribosomal subunit | 2.99E-02 |
| 50 | GO:0048046: apoplast | 3.20E-02 |
| 51 | GO:0031902: late endosome membrane | 3.35E-02 |
| 52 | GO:0031201: SNARE complex | 3.35E-02 |
| 53 | GO:0043231: intracellular membrane-bounded organelle | 4.60E-02 |