co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G66340

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019484: beta-alanine catabolic process	0.00E+00
2	GO:0035278: miRNA mediated inhibition of translation	0.00E+00
3	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
4	GO:0006105: succinate metabolic process	0.00E+00
5	GO:0071578: zinc II ion transmembrane import	0.00E+00
6	GO:0009865: pollen tube adhesion	5.79E-05
7	GO:0006540: glutamate decarboxylation to succinate	5.79E-05
8	GO:0009450: gamma-aminobutyric acid catabolic process	5.79E-05
9	GO:1990641: response to iron ion starvation	5.79E-05
10	GO:0071366: cellular response to indolebutyric acid stimulus	5.79E-05
11	GO:0006101: citrate metabolic process	1.41E-04
12	GO:0046488: phosphatidylinositol metabolic process	1.41E-04
13	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	1.41E-04
14	GO:0010033: response to organic substance	1.41E-04
15	GO:0048367: shoot system development	1.66E-04
16	GO:0042344: indole glucosinolate catabolic process	2.40E-04
17	GO:0006954: inflammatory response	2.40E-04
18	GO:0006517: protein deglycosylation	2.40E-04
19	GO:0006473: protein acetylation	2.40E-04
20	GO:0006013: mannose metabolic process	2.40E-04
21	GO:0009113: purine nucleobase biosynthetic process	3.49E-04
22	GO:0006882: cellular zinc ion homeostasis	3.49E-04
23	GO:0006020: inositol metabolic process	3.49E-04
24	GO:2001289: lipid X metabolic process	3.49E-04
25	GO:1901000: regulation of response to salt stress	3.49E-04
26	GO:0070301: cellular response to hydrogen peroxide	3.49E-04
27	GO:0009963: positive regulation of flavonoid biosynthetic process	3.49E-04
28	GO:0061088: regulation of sequestering of zinc ion	4.66E-04
29	GO:0006878: cellular copper ion homeostasis	4.66E-04
30	GO:0006536: glutamate metabolic process	4.66E-04
31	GO:1990937: xylan acetylation	4.66E-04
32	GO:0048015: phosphatidylinositol-mediated signaling	5.92E-04
33	GO:0045491: xylan metabolic process	7.24E-04
34	GO:0015691: cadmium ion transport	7.24E-04
35	GO:0010358: leaf shaping	7.24E-04
36	GO:0006368: transcription elongation from RNA polymerase II promoter	1.01E-03
37	GO:0046470: phosphatidylcholine metabolic process	1.01E-03
38	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.01E-03
39	GO:0071669: plant-type cell wall organization or biogenesis	1.01E-03
40	GO:0009396: folic acid-containing compound biosynthetic process	1.01E-03
41	GO:0006605: protein targeting	1.16E-03
42	GO:0006102: isocitrate metabolic process	1.16E-03
43	GO:0006491: N-glycan processing	1.16E-03
44	GO:0048364: root development	1.63E-03
45	GO:0016573: histone acetylation	1.65E-03
46	GO:0035999: tetrahydrofolate interconversion	1.65E-03
47	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.65E-03
48	GO:0052544: defense response by callose deposition in cell wall	2.02E-03
49	GO:0018105: peptidyl-serine phosphorylation	2.21E-03
50	GO:0006541: glutamine metabolic process	2.62E-03
51	GO:0009908: flower development	2.81E-03
52	GO:0005985: sucrose metabolic process	2.82E-03
53	GO:0006468: protein phosphorylation	3.08E-03
54	GO:0006487: protein N-linked glycosylation	3.26E-03
55	GO:0035556: intracellular signal transduction	3.42E-03
56	GO:0031348: negative regulation of defense response	3.95E-03
57	GO:0045492: xylan biosynthetic process	4.44E-03
58	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.69E-03
59	GO:0009737: response to abscisic acid	4.83E-03
60	GO:0000271: polysaccharide biosynthetic process	4.95E-03
61	GO:0080022: primary root development	4.95E-03
62	GO:0042391: regulation of membrane potential	4.95E-03
63	GO:0010154: fruit development	5.21E-03
64	GO:0006623: protein targeting to vacuole	5.75E-03
65	GO:0010183: pollen tube guidance	5.75E-03
66	GO:0006891: intra-Golgi vesicle-mediated transport	6.02E-03
67	GO:0006970: response to osmotic stress	6.10E-03
68	GO:0048366: leaf development	6.66E-03
69	GO:0006914: autophagy	6.88E-03
70	GO:0010252: auxin homeostasis	6.88E-03
71	GO:0006904: vesicle docking involved in exocytosis	7.18E-03
72	GO:0016579: protein deubiquitination	7.47E-03
73	GO:0046777: protein autophosphorylation	7.50E-03
74	GO:0009627: systemic acquired resistance	8.40E-03
75	GO:0030244: cellulose biosynthetic process	9.36E-03
76	GO:0009817: defense response to fungus, incompatible interaction	9.36E-03
77	GO:0009651: response to salt stress	9.62E-03
78	GO:0009832: plant-type cell wall biogenesis	9.69E-03
79	GO:0048767: root hair elongation	9.69E-03
80	GO:0010311: lateral root formation	9.69E-03
81	GO:0009834: plant-type secondary cell wall biogenesis	1.00E-02
82	GO:0006811: ion transport	1.00E-02
83	GO:0010119: regulation of stomatal movement	1.04E-02
84	GO:0010043: response to zinc ion	1.04E-02
85	GO:0006865: amino acid transport	1.07E-02
86	GO:0006099: tricarboxylic acid cycle	1.14E-02
87	GO:0006887: exocytosis	1.25E-02
88	GO:0006631: fatty acid metabolic process	1.25E-02
89	GO:0008283: cell proliferation	1.32E-02
90	GO:0051707: response to other organism	1.32E-02
91	GO:0046686: response to cadmium ion	1.37E-02
92	GO:0009644: response to high light intensity	1.40E-02
93	GO:0006855: drug transmembrane transport	1.47E-02
94	GO:0006812: cation transport	1.55E-02
95	GO:0042538: hyperosmotic salinity response	1.55E-02
96	GO:0009809: lignin biosynthetic process	1.63E-02
97	GO:0006417: regulation of translation	1.75E-02
98	GO:0009738: abscisic acid-activated signaling pathway	1.79E-02
99	GO:0006096: glycolytic process	1.84E-02
100	GO:0009626: plant-type hypersensitive response	1.92E-02
101	GO:0006396: RNA processing	2.14E-02
102	GO:0009845: seed germination	2.60E-02
103	GO:0009790: embryo development	2.75E-02
104	GO:0006470: protein dephosphorylation	3.40E-02
105	GO:0042742: defense response to bacterium	3.73E-02
106	GO:0009860: pollen tube growth	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
2	GO:0047205: quinate O-hydroxycinnamoyltransferase activity	0.00E+00
3	GO:0004572: mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity	0.00E+00
4	GO:0047172: shikimate O-hydroxycinnamoyltransferase activity	0.00E+00
5	GO:0003867: 4-aminobutyrate transaminase activity	5.79E-05
6	GO:0004329: formate-tetrahydrofolate ligase activity	1.41E-04
7	GO:0003994: aconitate hydratase activity	1.41E-04
8	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	1.41E-04
9	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	1.41E-04
10	GO:0005047: signal recognition particle binding	2.40E-04
11	GO:0015086: cadmium ion transmembrane transporter activity	3.49E-04
12	GO:0048027: mRNA 5'-UTR binding	3.49E-04
13	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	5.74E-04
14	GO:0002020: protease binding	5.92E-04
15	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	5.92E-04
16	GO:0009931: calcium-dependent protein serine/threonine kinase activity	6.17E-04
17	GO:0004683: calmodulin-dependent protein kinase activity	6.49E-04
18	GO:0015562: efflux transmembrane transporter activity	7.24E-04
19	GO:0042578: phosphoric ester hydrolase activity	7.24E-04
20	GO:0051753: mannan synthase activity	8.63E-04
21	GO:0004559: alpha-mannosidase activity	8.63E-04
22	GO:0070300: phosphatidic acid binding	8.63E-04
23	GO:0005516: calmodulin binding	9.86E-04
24	GO:0004620: phospholipase activity	1.01E-03
25	GO:0004525: ribonuclease III activity	1.16E-03
26	GO:0004630: phospholipase D activity	1.32E-03
27	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.32E-03
28	GO:0030955: potassium ion binding	1.65E-03
29	GO:0004743: pyruvate kinase activity	1.65E-03
30	GO:0015171: amino acid transmembrane transporter activity	1.68E-03
31	GO:0003712: transcription cofactor activity	2.82E-03
32	GO:0030552: cAMP binding	2.82E-03
33	GO:0030553: cGMP binding	2.82E-03
34	GO:0005385: zinc ion transmembrane transporter activity	3.26E-03
35	GO:0005216: ion channel activity	3.49E-03
36	GO:0008324: cation transmembrane transporter activity	3.49E-03
37	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	3.72E-03
38	GO:0016760: cellulose synthase (UDP-forming) activity	4.20E-03
39	GO:0016301: kinase activity	4.76E-03
40	GO:0005249: voltage-gated potassium channel activity	4.95E-03
41	GO:0004402: histone acetyltransferase activity	4.95E-03
42	GO:0030551: cyclic nucleotide binding	4.95E-03
43	GO:0030276: clathrin binding	5.21E-03
44	GO:0005524: ATP binding	5.34E-03
45	GO:0004843: thiol-dependent ubiquitin-specific protease activity	6.02E-03
46	GO:0016759: cellulose synthase activity	6.88E-03
47	GO:0005096: GTPase activator activity	9.69E-03
48	GO:0004222: metalloendopeptidase activity	1.00E-02
49	GO:0050897: cobalt ion binding	1.04E-02
50	GO:0051539: 4 iron, 4 sulfur cluster binding	1.21E-02
51	GO:0004672: protein kinase activity	1.27E-02
52	GO:0035091: phosphatidylinositol binding	1.40E-02
53	GO:0016887: ATPase activity	1.61E-02
54	GO:0004674: protein serine/threonine kinase activity	1.71E-02
55	GO:0016740: transferase activity	2.25E-02
56	GO:0030246: carbohydrate binding	2.49E-02
57	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.51E-02
58	GO:0005507: copper ion binding	2.63E-02
59	GO:0030170: pyridoxal phosphate binding	2.65E-02
60	GO:0005515: protein binding	2.65E-02
61	GO:0015144: carbohydrate transmembrane transporter activity	2.80E-02
62	GO:0005351: sugar:proton symporter activity	3.04E-02
63	GO:0005509: calcium ion binding	3.45E-02
64	GO:0000287: magnesium ion binding	4.17E-02
65	GO:0046982: protein heterodimerization activity	4.17E-02
66	GO:0050660: flavin adenine dinucleotide binding	4.68E-02
67	GO:0004497: monooxygenase activity	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0070449: elongin complex	0.00E+00
2	GO:0005785: signal recognition particle receptor complex	0.00E+00
3	GO:0030136: clathrin-coated vesicle	2.68E-04
4	GO:0005886: plasma membrane	4.62E-04
5	GO:0005776: autophagosome	4.66E-04
6	GO:0005794: Golgi apparatus	5.84E-04
7	GO:0030173: integral component of Golgi membrane	8.63E-04
8	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.32E-03
9	GO:0017119: Golgi transport complex	1.83E-03
10	GO:0010008: endosome membrane	1.85E-03
11	GO:0005884: actin filament	2.02E-03
12	GO:0005774: vacuolar membrane	2.57E-03
13	GO:0031410: cytoplasmic vesicle	3.95E-03
14	GO:0005770: late endosome	5.21E-03
15	GO:0005802: trans-Golgi network	5.79E-03
16	GO:0000145: exocyst	6.31E-03
17	GO:0005768: endosome	6.82E-03
18	GO:0000932: P-body	7.78E-03
19	GO:0005783: endoplasmic reticulum	8.75E-03
20	GO:0016020: membrane	9.50E-03
21	GO:0000786: nucleosome	1.07E-02
22	GO:0000139: Golgi membrane	1.15E-02
23	GO:0005829: cytosol	1.21E-02
24	GO:0031966: mitochondrial membrane	1.55E-02
25	GO:0005681: spliceosomal complex	1.84E-02
26	GO:0005777: peroxisome	2.12E-02
27	GO:0016021: integral component of membrane	3.41E-02
28	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.51E-02