co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G66100

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
2	GO:0033231: carbohydrate export	0.00E+00
3	GO:0090627: plant epidermal cell differentiation	0.00E+00
4	GO:0015995: chlorophyll biosynthetic process	4.41E-05
5	GO:1902334: fructose export from vacuole to cytoplasm	6.74E-05
6	GO:0015755: fructose transport	6.74E-05
7	GO:0016024: CDP-diacylglycerol biosynthetic process	9.94E-05
8	GO:0010541: acropetal auxin transport	1.62E-04
9	GO:0001736: establishment of planar polarity	1.62E-04
10	GO:0010160: formation of animal organ boundary	2.75E-04
11	GO:0080055: low-affinity nitrate transport	2.75E-04
12	GO:0045493: xylan catabolic process	2.75E-04
13	GO:0009958: positive gravitropism	3.82E-04
14	GO:0080170: hydrogen peroxide transmembrane transport	3.98E-04
15	GO:0043481: anthocyanin accumulation in tissues in response to UV light	3.98E-04
16	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.98E-04
17	GO:0051513: regulation of monopolar cell growth	3.98E-04
18	GO:0009733: response to auxin	5.13E-04
19	GO:0030104: water homeostasis	5.32E-04
20	GO:0009416: response to light stimulus	7.25E-04
21	GO:0009913: epidermal cell differentiation	8.23E-04
22	GO:0006655: phosphatidylglycerol biosynthetic process	8.23E-04
23	GO:0060918: auxin transport	8.23E-04
24	GO:0006751: glutathione catabolic process	8.23E-04
25	GO:0017148: negative regulation of translation	9.79E-04
26	GO:1900056: negative regulation of leaf senescence	1.14E-03
27	GO:1900057: positive regulation of leaf senescence	1.14E-03
28	GO:0046620: regulation of organ growth	1.32E-03
29	GO:0006605: protein targeting	1.32E-03
30	GO:0009926: auxin polar transport	1.38E-03
31	GO:0009245: lipid A biosynthetic process	1.69E-03
32	GO:0010206: photosystem II repair	1.69E-03
33	GO:0009664: plant-type cell wall organization	1.72E-03
34	GO:0009638: phototropism	1.89E-03
35	GO:0016042: lipid catabolic process	1.92E-03
36	GO:0006995: cellular response to nitrogen starvation	2.10E-03
37	GO:0048829: root cap development	2.10E-03
38	GO:0010015: root morphogenesis	2.31E-03
39	GO:0009773: photosynthetic electron transport in photosystem I	2.31E-03
40	GO:0009750: response to fructose	2.31E-03
41	GO:0048765: root hair cell differentiation	2.31E-03
42	GO:0008361: regulation of cell size	2.53E-03
43	GO:0009785: blue light signaling pathway	2.76E-03
44	GO:0009718: anthocyanin-containing compound biosynthetic process	2.76E-03
45	GO:0010143: cutin biosynthetic process	2.99E-03
46	GO:0010540: basipetal auxin transport	2.99E-03
47	GO:0009734: auxin-activated signaling pathway	3.07E-03
48	GO:0010030: positive regulation of seed germination	3.23E-03
49	GO:0009944: polarity specification of adaxial/abaxial axis	3.73E-03
50	GO:0051017: actin filament bundle assembly	3.73E-03
51	GO:0007017: microtubule-based process	3.99E-03
52	GO:0003333: amino acid transmembrane transport	4.26E-03
53	GO:0051260: protein homooligomerization	4.26E-03
54	GO:0048511: rhythmic process	4.26E-03
55	GO:0045490: pectin catabolic process	4.48E-03
56	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.81E-03
57	GO:0048443: stamen development	5.09E-03
58	GO:0006284: base-excision repair	5.09E-03
59	GO:0009306: protein secretion	5.09E-03
60	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.38E-03
61	GO:0070417: cellular response to cold	5.38E-03
62	GO:0042631: cellular response to water deprivation	5.68E-03
63	GO:0042335: cuticle development	5.68E-03
64	GO:0034220: ion transmembrane transport	5.68E-03
65	GO:0009646: response to absence of light	6.28E-03
66	GO:0042752: regulation of circadian rhythm	6.28E-03
67	GO:0048825: cotyledon development	6.60E-03
68	GO:0016032: viral process	7.24E-03
69	GO:0010252: auxin homeostasis	7.90E-03
70	GO:0009639: response to red or far red light	7.90E-03
71	GO:0009828: plant-type cell wall loosening	7.90E-03
72	GO:0080167: response to karrikin	8.57E-03
73	GO:0010027: thylakoid membrane organization	8.93E-03
74	GO:0009627: systemic acquired resistance	9.65E-03
75	GO:0010411: xyloglucan metabolic process	1.00E-02
76	GO:0071555: cell wall organization	1.01E-02
77	GO:0010311: lateral root formation	1.11E-02
78	GO:0006869: lipid transport	1.13E-02
79	GO:0010218: response to far red light	1.15E-02
80	GO:0048527: lateral root development	1.19E-02
81	GO:0032259: methylation	1.21E-02
82	GO:0006865: amino acid transport	1.23E-02
83	GO:0009637: response to blue light	1.27E-02
84	GO:0009640: photomorphogenesis	1.52E-02
85	GO:0006857: oligopeptide transport	1.97E-02
86	GO:0009735: response to cytokinin	2.06E-02
87	GO:0009740: gibberellic acid mediated signaling pathway	2.31E-02
88	GO:0009624: response to nematode	2.42E-02
89	GO:0009845: seed germination	3.00E-02
90	GO:0006633: fatty acid biosynthetic process	3.33E-02
91	GO:0007623: circadian rhythm	3.57E-02
92	GO:0009739: response to gibberellin	3.86E-02
93	GO:0006470: protein dephosphorylation	3.92E-02
94	GO:0007166: cell surface receptor signaling pathway	3.92E-02
95	GO:0009826: unidimensional cell growth	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
2	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
3	GO:0103007: indole-3-acetate carboxyl methyltransferase activity	0.00E+00
4	GO:0051749: indole acetic acid carboxyl methyltransferase activity	0.00E+00
5	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
6	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
7	GO:0015284: fructose uniporter activity	0.00E+00
8	GO:0005353: fructose transmembrane transporter activity	1.62E-04
9	GO:0003839: gamma-glutamylcyclotransferase activity	1.62E-04
10	GO:0080054: low-affinity nitrate transmembrane transporter activity	2.75E-04
11	GO:0030570: pectate lyase activity	2.77E-04
12	GO:0016851: magnesium chelatase activity	3.98E-04
13	GO:0043023: ribosomal large subunit binding	3.98E-04
14	GO:0016829: lyase activity	4.01E-04
15	GO:0008289: lipid binding	5.01E-04
16	GO:0010011: auxin binding	5.32E-04
17	GO:0010328: auxin influx transmembrane transporter activity	5.32E-04
18	GO:0009044: xylan 1,4-beta-xylosidase activity	5.32E-04
19	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	5.32E-04
20	GO:0046556: alpha-L-arabinofuranosidase activity	5.32E-04
21	GO:0016791: phosphatase activity	5.67E-04
22	GO:0008725: DNA-3-methyladenine glycosylase activity	6.73E-04
23	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	8.23E-04
24	GO:0031177: phosphopantetheine binding	8.23E-04
25	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	8.23E-04
26	GO:0016788: hydrolase activity, acting on ester bonds	9.62E-04
27	GO:0000035: acyl binding	9.79E-04
28	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.32E-03
29	GO:0052689: carboxylic ester hydrolase activity	1.39E-03
30	GO:0008794: arsenate reductase (glutaredoxin) activity	2.31E-03
31	GO:0004650: polygalacturonase activity	2.39E-03
32	GO:0016746: transferase activity, transferring acyl groups	2.69E-03
33	GO:0010329: auxin efflux transmembrane transporter activity	2.76E-03
34	GO:0031072: heat shock protein binding	2.76E-03
35	GO:0051119: sugar transmembrane transporter activity	3.23E-03
36	GO:0003756: protein disulfide isomerase activity	5.09E-03
37	GO:0042802: identical protein binding	5.68E-03
38	GO:0051015: actin filament binding	7.57E-03
39	GO:0005200: structural constituent of cytoskeleton	8.24E-03
40	GO:0015250: water channel activity	8.93E-03
41	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.04E-02
42	GO:0004871: signal transducer activity	1.08E-02
43	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.08E-02
44	GO:0005096: GTPase activator activity	1.11E-02
45	GO:0004722: protein serine/threonine phosphatase activity	1.13E-02
46	GO:0003993: acid phosphatase activity	1.31E-02
47	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.35E-02
48	GO:0009055: electron carrier activity	1.36E-02
49	GO:0051537: 2 iron, 2 sulfur cluster binding	1.61E-02
50	GO:0015293: symporter activity	1.65E-02
51	GO:0015171: amino acid transmembrane transporter activity	2.02E-02
52	GO:0003779: actin binding	2.37E-02
53	GO:0051082: unfolded protein binding	2.42E-02
54	GO:0015035: protein disulfide oxidoreductase activity	2.47E-02
55	GO:0004252: serine-type endopeptidase activity	3.05E-02
56	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.39E-02
57	GO:0046872: metal ion binding	3.75E-02
58	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.23E-02
59	GO:0005515: protein binding	4.46E-02
60	GO:0000287: magnesium ion binding	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0043674: columella	6.74E-05
2	GO:0030093: chloroplast photosystem I	1.62E-04
3	GO:0010007: magnesium chelatase complex	2.75E-04
4	GO:0009531: secondary cell wall	3.98E-04
5	GO:0005576: extracellular region	1.03E-03
6	GO:0042807: central vacuole	1.14E-03
7	GO:0009986: cell surface	1.14E-03
8	GO:0045298: tubulin complex	1.69E-03
9	GO:0008180: COP9 signalosome	1.69E-03
10	GO:0009535: chloroplast thylakoid membrane	1.71E-03
11	GO:0005886: plasma membrane	2.60E-03
12	GO:0009508: plastid chromosome	2.76E-03
13	GO:0009505: plant-type cell wall	2.94E-03
14	GO:0009570: chloroplast stroma	3.34E-03
15	GO:0009705: plant-type vacuole membrane	4.48E-03
16	GO:0005618: cell wall	4.65E-03
17	GO:0015629: actin cytoskeleton	4.81E-03
18	GO:0009534: chloroplast thylakoid	5.22E-03
19	GO:0009507: chloroplast	5.75E-03
20	GO:0009941: chloroplast envelope	6.27E-03
21	GO:0009295: nucleoid	8.24E-03
22	GO:0031969: chloroplast membrane	8.57E-03
23	GO:0019005: SCF ubiquitin ligase complex	1.08E-02
24	GO:0031977: thylakoid lumen	1.44E-02
25	GO:0005856: cytoskeleton	1.65E-02
26	GO:0000502: proteasome complex	1.88E-02
27	GO:0009579: thylakoid	2.70E-02
28	GO:0009543: chloroplast thylakoid lumen	2.84E-02
29	GO:0005623: cell	2.89E-02
30	GO:0031225: anchored component of membrane	3.52E-02