Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G65560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901038: cyanidin 3-O-glucoside metabolic process0.00E+00
2GO:0010157: response to chlorate0.00E+00
3GO:0009264: deoxyribonucleotide catabolic process0.00E+00
4GO:0080149: sucrose induced translational repression0.00E+00
5GO:0009718: anthocyanin-containing compound biosynthetic process3.66E-09
6GO:0051555: flavonol biosynthetic process3.02E-07
7GO:0009698: phenylpropanoid metabolic process3.99E-07
8GO:0009813: flavonoid biosynthetic process4.63E-07
9GO:0048438: floral whorl development4.45E-05
10GO:0010224: response to UV-B8.01E-05
11GO:0010220: positive regulation of vernalization response1.10E-04
12GO:0080183: response to photooxidative stress1.10E-04
13GO:1900386: positive regulation of flavonol biosynthetic process1.10E-04
14GO:0071395: cellular response to jasmonic acid stimulus1.10E-04
15GO:0009411: response to UV1.58E-04
16GO:1901562: response to paraquat1.89E-04
17GO:0010253: UDP-rhamnose biosynthetic process1.89E-04
18GO:0046417: chorismate metabolic process1.89E-04
19GO:0040009: regulation of growth rate1.89E-04
20GO:0006556: S-adenosylmethionine biosynthetic process1.89E-04
21GO:0034613: cellular protein localization3.73E-04
22GO:0009435: NAD biosynthetic process4.75E-04
23GO:0071368: cellular response to cytokinin stimulus4.75E-04
24GO:0006796: phosphate-containing compound metabolic process5.82E-04
25GO:0006555: methionine metabolic process5.82E-04
26GO:0042732: D-xylose metabolic process5.82E-04
27GO:0010315: auxin efflux5.82E-04
28GO:0000060: protein import into nucleus, translocation5.82E-04
29GO:0080167: response to karrikin6.28E-04
30GO:0010076: maintenance of floral meristem identity6.94E-04
31GO:0017148: negative regulation of translation6.94E-04
32GO:0010077: maintenance of inflorescence meristem identity6.94E-04
33GO:0098869: cellular oxidant detoxification8.11E-04
34GO:0009704: de-etiolation9.32E-04
35GO:0005978: glycogen biosynthetic process9.32E-04
36GO:0015996: chlorophyll catabolic process1.06E-03
37GO:0009733: response to auxin1.09E-03
38GO:0009809: lignin biosynthetic process1.10E-03
39GO:0009073: aromatic amino acid family biosynthetic process1.61E-03
40GO:0000272: polysaccharide catabolic process1.61E-03
41GO:0016925: protein sumoylation1.77E-03
42GO:0045037: protein import into chloroplast stroma1.77E-03
43GO:0010582: floral meristem determinacy1.77E-03
44GO:0009225: nucleotide-sugar metabolic process2.25E-03
45GO:0045893: positive regulation of transcription, DNA-templated2.47E-03
46GO:0009739: response to gibberellin2.94E-03
47GO:0031408: oxylipin biosynthetic process2.96E-03
48GO:0006730: one-carbon metabolic process3.14E-03
49GO:0042127: regulation of cell proliferation3.53E-03
50GO:0010584: pollen exine formation3.53E-03
51GO:0006342: chromatin silencing4.14E-03
52GO:0019252: starch biosynthetic process4.56E-03
53GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.77E-03
54GO:0010252: auxin homeostasis5.45E-03
55GO:0030154: cell differentiation5.63E-03
56GO:0045454: cell redox homeostasis5.99E-03
57GO:0010311: lateral root formation7.65E-03
58GO:0055114: oxidation-reduction process8.10E-03
59GO:0008152: metabolic process8.13E-03
60GO:0007568: aging8.18E-03
61GO:0009926: auxin polar transport1.04E-02
62GO:0009744: response to sucrose1.04E-02
63GO:0000165: MAPK cascade1.19E-02
64GO:0031347: regulation of defense response1.19E-02
65GO:0051603: proteolysis involved in cellular protein catabolic process1.32E-02
66GO:0009909: regulation of flower development1.38E-02
67GO:0042545: cell wall modification1.61E-02
68GO:0009845: seed germination2.05E-02
69GO:0016036: cellular response to phosphate starvation2.31E-02
70GO:0007623: circadian rhythm2.43E-02
71GO:0045490: pectin catabolic process2.43E-02
72GO:0045944: positive regulation of transcription from RNA polymerase II promoter3.14E-02
73GO:0009860: pollen tube growth3.50E-02
74GO:0009409: response to cold3.60E-02
75GO:0009723: response to ethylene3.68E-02
RankGO TermAdjusted P value
1GO:0047213: anthocyanidin 3-O-glucosyltransferase activity0.00E+00
2GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity0.00E+00
3GO:0047890: flavanone 4-reductase activity0.00E+00
4GO:0080018: anthocyanin 5-O-glucosyltransferase activity0.00E+00
5GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
6GO:0008734: L-aspartate oxidase activity0.00E+00
7GO:0045552: dihydrokaempferol 4-reductase activity0.00E+00
8GO:0045430: chalcone isomerase activity2.26E-06
9GO:0008194: UDP-glycosyltransferase activity2.06E-05
10GO:0045486: naringenin 3-dioxygenase activity4.45E-05
11GO:0004106: chorismate mutase activity1.10E-04
12GO:0001047: core promoter binding1.10E-04
13GO:0008460: dTDP-glucose 4,6-dehydratase activity1.10E-04
14GO:0010280: UDP-L-rhamnose synthase activity1.10E-04
15GO:0050377: UDP-glucose 4,6-dehydratase activity1.10E-04
16GO:0003988: acetyl-CoA C-acyltransferase activity1.10E-04
17GO:0080043: quercetin 3-O-glucosyltransferase activity1.12E-04
18GO:0080044: quercetin 7-O-glucosyltransferase activity1.12E-04
19GO:0035251: UDP-glucosyltransferase activity1.30E-04
20GO:0033897: ribonuclease T2 activity1.89E-04
21GO:0004478: methionine adenosyltransferase activity1.89E-04
22GO:0008253: 5'-nucleotidase activity1.89E-04
23GO:0008878: glucose-1-phosphate adenylyltransferase activity3.73E-04
24GO:0046982: protein heterodimerization activity4.68E-04
25GO:0031386: protein tag4.75E-04
26GO:0016462: pyrophosphatase activity5.82E-04
27GO:0035252: UDP-xylosyltransferase activity5.82E-04
28GO:0016688: L-ascorbate peroxidase activity5.82E-04
29GO:0016161: beta-amylase activity6.94E-04
30GO:0102425: myricetin 3-O-glucosyltransferase activity8.11E-04
31GO:0102360: daphnetin 3-O-glucosyltransferase activity8.11E-04
32GO:0004427: inorganic diphosphatase activity8.11E-04
33GO:0016621: cinnamoyl-CoA reductase activity8.11E-04
34GO:0047893: flavonol 3-O-glucosyltransferase activity9.32E-04
35GO:0016207: 4-coumarate-CoA ligase activity1.19E-03
36GO:0009672: auxin:proton symporter activity1.32E-03
37GO:0016874: ligase activity1.45E-03
38GO:0004521: endoribonuclease activity1.77E-03
39GO:0010329: auxin efflux transmembrane transporter activity1.92E-03
40GO:0031418: L-ascorbic acid binding2.60E-03
41GO:0004540: ribonuclease activity2.96E-03
42GO:0050662: coenzyme binding4.35E-03
43GO:0016853: isomerase activity4.35E-03
44GO:0004197: cysteine-type endopeptidase activity4.99E-03
45GO:0016757: transferase activity, transferring glycosyl groups5.83E-03
46GO:0042803: protein homodimerization activity6.27E-03
47GO:0016491: oxidoreductase activity7.17E-03
48GO:0003700: transcription factor activity, sequence-specific DNA binding1.08E-02
49GO:0008234: cysteine-type peptidase activity1.38E-02
50GO:0045330: aspartyl esterase activity1.38E-02
51GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.48E-02
52GO:0030599: pectinesterase activity1.58E-02
53GO:0003779: actin binding1.61E-02
54GO:0051082: unfolded protein binding1.65E-02
55GO:0015035: protein disulfide oxidoreductase activity1.68E-02
56GO:0016758: transferase activity, transferring hexosyl groups1.90E-02
57GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.12E-02
58GO:0046910: pectinesterase inhibitor activity2.31E-02
59GO:0044212: transcription regulatory region DNA binding2.66E-02
60GO:0000287: magnesium ion binding3.27E-02
61GO:0043531: ADP binding3.55E-02
62GO:0003677: DNA binding3.73E-02
63GO:0043565: sequence-specific DNA binding3.95E-02
64GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting4.40E-02
65GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding4.74E-02
RankGO TermAdjusted P value
1GO:0042406: extrinsic component of endoplasmic reticulum membrane4.81E-07
2GO:0009507: chloroplast1.11E-03
3GO:0043231: intracellular membrane-bounded organelle1.14E-03
4GO:0005764: lysosome2.09E-03
5GO:0000790: nuclear chromatin3.73E-03
6GO:0071944: cell periphery5.22E-03
7GO:0000786: nucleosome8.44E-03
8GO:0005773: vacuole1.14E-02
9GO:0010287: plastoglobule1.86E-02
10GO:0005623: cell1.97E-02
11GO:0031225: anchored component of membrane2.05E-02
12GO:0009705: plant-type vacuole membrane2.43E-02
13GO:0005774: vacuolar membrane2.44E-02
14GO:0005615: extracellular space2.63E-02
15GO:0005618: cell wall2.88E-02
16GO:0009536: plastid3.27E-02
Gene type



Gene DE type