co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G65500

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0015690: aluminum cation transport	0.00E+00
3	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
4	GO:0045792: negative regulation of cell size	0.00E+00
5	GO:0042430: indole-containing compound metabolic process	0.00E+00
6	GO:0030149: sphingolipid catabolic process	0.00E+00
7	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
8	GO:0009617: response to bacterium	7.71E-10
9	GO:0010200: response to chitin	1.44E-07
10	GO:0009626: plant-type hypersensitive response	1.12E-05
11	GO:0009627: systemic acquired resistance	1.58E-05
12	GO:0006979: response to oxidative stress	5.51E-05
13	GO:0009646: response to absence of light	1.11E-04
14	GO:0006468: protein phosphorylation	1.63E-04
15	GO:0009609: response to symbiotic bacterium	1.75E-04
16	GO:0033306: phytol metabolic process	1.75E-04
17	GO:0010230: alternative respiration	1.75E-04
18	GO:0009615: response to virus	2.30E-04
19	GO:0006032: chitin catabolic process	2.90E-04
20	GO:0000272: polysaccharide catabolic process	3.36E-04
21	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.96E-04
22	GO:0044419: interspecies interaction between organisms	3.96E-04
23	GO:0031349: positive regulation of defense response	3.96E-04
24	GO:0019752: carboxylic acid metabolic process	3.96E-04
25	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	3.96E-04
26	GO:0006952: defense response	5.47E-04
27	GO:0051707: response to other organism	6.19E-04
28	GO:0010272: response to silver ion	6.47E-04
29	GO:0048281: inflorescence morphogenesis	6.47E-04
30	GO:0010581: regulation of starch biosynthetic process	6.47E-04
31	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	6.47E-04
32	GO:1900140: regulation of seedling development	6.47E-04
33	GO:0016998: cell wall macromolecule catabolic process	8.23E-04
34	GO:0043207: response to external biotic stimulus	9.23E-04
35	GO:0009855: determination of bilateral symmetry	9.23E-04
36	GO:0002679: respiratory burst involved in defense response	9.23E-04
37	GO:0001676: long-chain fatty acid metabolic process	9.23E-04
38	GO:0046836: glycolipid transport	9.23E-04
39	GO:0019438: aromatic compound biosynthetic process	9.23E-04
40	GO:0048194: Golgi vesicle budding	9.23E-04
41	GO:0042742: defense response to bacterium	1.11E-03
42	GO:0060548: negative regulation of cell death	1.22E-03
43	GO:0009652: thigmotropism	1.22E-03
44	GO:0045727: positive regulation of translation	1.22E-03
45	GO:0042273: ribosomal large subunit biogenesis	1.22E-03
46	GO:0010508: positive regulation of autophagy	1.22E-03
47	GO:1901141: regulation of lignin biosynthetic process	1.22E-03
48	GO:0080037: negative regulation of cytokinin-activated signaling pathway	1.22E-03
49	GO:0009611: response to wounding	1.26E-03
50	GO:0010197: polar nucleus fusion	1.32E-03
51	GO:0034052: positive regulation of plant-type hypersensitive response	1.56E-03
52	GO:0009697: salicylic acid biosynthetic process	1.56E-03
53	GO:0045487: gibberellin catabolic process	1.56E-03
54	GO:2000762: regulation of phenylpropanoid metabolic process	1.56E-03
55	GO:0031365: N-terminal protein amino acid modification	1.56E-03
56	GO:0010193: response to ozone	1.63E-03
57	GO:0000302: response to reactive oxygen species	1.63E-03
58	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.91E-03
59	GO:0009228: thiamine biosynthetic process	1.91E-03
60	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	1.91E-03
61	GO:0010405: arabinogalactan protein metabolic process	1.91E-03
62	GO:0009409: response to cold	2.02E-03
63	GO:2000067: regulation of root morphogenesis	2.30E-03
64	GO:0009612: response to mechanical stimulus	2.30E-03
65	GO:0010555: response to mannitol	2.30E-03
66	GO:0009816: defense response to bacterium, incompatible interaction	2.47E-03
67	GO:0046686: response to cadmium ion	2.67E-03
68	GO:0009610: response to symbiotic fungus	2.70E-03
69	GO:0043090: amino acid import	2.70E-03
70	GO:1900056: negative regulation of leaf senescence	2.70E-03
71	GO:0080186: developmental vegetative growth	2.70E-03
72	GO:0070370: cellular heat acclimation	2.70E-03
73	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.70E-03
74	GO:0010150: leaf senescence	2.77E-03
75	GO:0008219: cell death	3.04E-03
76	GO:0050832: defense response to fungus	3.12E-03
77	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.13E-03
78	GO:0030162: regulation of proteolysis	3.13E-03
79	GO:0050821: protein stabilization	3.13E-03
80	GO:0031540: regulation of anthocyanin biosynthetic process	3.13E-03
81	GO:0006102: isocitrate metabolic process	3.13E-03
82	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.20E-03
83	GO:0009407: toxin catabolic process	3.35E-03
84	GO:0022900: electron transport chain	3.58E-03
85	GO:0007186: G-protein coupled receptor signaling pathway	3.58E-03
86	GO:0010262: somatic embryogenesis	3.58E-03
87	GO:0010120: camalexin biosynthetic process	3.58E-03
88	GO:0043562: cellular response to nitrogen levels	3.58E-03
89	GO:0051865: protein autoubiquitination	4.05E-03
90	GO:0019432: triglyceride biosynthetic process	4.05E-03
91	GO:0010112: regulation of systemic acquired resistance	4.05E-03
92	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.54E-03
93	GO:0009299: mRNA transcription	5.05E-03
94	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.05E-03
95	GO:0009636: response to toxic substance	5.56E-03
96	GO:0015770: sucrose transport	5.58E-03
97	GO:0009750: response to fructose	5.58E-03
98	GO:0016485: protein processing	5.58E-03
99	GO:0015706: nitrate transport	6.13E-03
100	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	6.13E-03
101	GO:0006626: protein targeting to mitochondrion	6.70E-03
102	GO:0010224: response to UV-B	6.90E-03
103	GO:0009266: response to temperature stimulus	7.28E-03
104	GO:0034605: cellular response to heat	7.28E-03
105	GO:0002237: response to molecule of bacterial origin	7.28E-03
106	GO:0010053: root epidermal cell differentiation	7.89E-03
107	GO:0042343: indole glucosinolate metabolic process	7.89E-03
108	GO:0010167: response to nitrate	7.89E-03
109	GO:0046688: response to copper ion	7.89E-03
110	GO:0070588: calcium ion transmembrane transport	7.89E-03
111	GO:0000162: tryptophan biosynthetic process	8.51E-03
112	GO:0000027: ribosomal large subunit assembly	9.15E-03
113	GO:0009863: salicylic acid mediated signaling pathway	9.15E-03
114	GO:0006825: copper ion transport	9.80E-03
115	GO:0009751: response to salicylic acid	1.02E-02
116	GO:0009408: response to heat	1.04E-02
117	GO:0098542: defense response to other organism	1.05E-02
118	GO:0009814: defense response, incompatible interaction	1.12E-02
119	GO:0016226: iron-sulfur cluster assembly	1.12E-02
120	GO:0035428: hexose transmembrane transport	1.12E-02
121	GO:0007005: mitochondrion organization	1.12E-02
122	GO:0031348: negative regulation of defense response	1.12E-02
123	GO:0071456: cellular response to hypoxia	1.12E-02
124	GO:0009686: gibberellin biosynthetic process	1.19E-02
125	GO:0009411: response to UV	1.19E-02
126	GO:0001944: vasculature development	1.19E-02
127	GO:0009625: response to insect	1.19E-02
128	GO:0009651: response to salt stress	1.20E-02
129	GO:0010091: trichome branching	1.26E-02
130	GO:0070417: cellular response to cold	1.33E-02
131	GO:0042631: cellular response to water deprivation	1.41E-02
132	GO:0042391: regulation of membrane potential	1.41E-02
133	GO:0009414: response to water deprivation	1.47E-02
134	GO:0009960: endosperm development	1.49E-02
135	GO:0006520: cellular amino acid metabolic process	1.49E-02
136	GO:0046323: glucose import	1.49E-02
137	GO:0009737: response to abscisic acid	1.56E-02
138	GO:0048544: recognition of pollen	1.56E-02
139	GO:0040008: regulation of growth	1.57E-02
140	GO:0010183: pollen tube guidance	1.64E-02
141	GO:0009749: response to glucose	1.64E-02
142	GO:0006635: fatty acid beta-oxidation	1.72E-02
143	GO:0032502: developmental process	1.81E-02
144	GO:0007166: cell surface receptor signaling pathway	1.88E-02
145	GO:0009639: response to red or far red light	1.98E-02
146	GO:0009416: response to light stimulus	2.15E-02
147	GO:0051607: defense response to virus	2.15E-02
148	GO:0001666: response to hypoxia	2.24E-02
149	GO:0035556: intracellular signal transduction	2.31E-02
150	GO:0042128: nitrate assimilation	2.42E-02
151	GO:0009723: response to ethylene	2.95E-02
152	GO:0048527: lateral root development	3.00E-02
153	GO:0010119: regulation of stomatal movement	3.00E-02
154	GO:0010043: response to zinc ion	3.00E-02
155	GO:0006865: amino acid transport	3.10E-02
156	GO:0080167: response to karrikin	3.16E-02
157	GO:0006511: ubiquitin-dependent protein catabolic process	3.16E-02
158	GO:0009853: photorespiration	3.20E-02
159	GO:0045087: innate immune response	3.20E-02
160	GO:0006099: tricarboxylic acid cycle	3.31E-02
161	GO:0046777: protein autophosphorylation	3.38E-02
162	GO:0044550: secondary metabolite biosynthetic process	3.44E-02
163	GO:0006631: fatty acid metabolic process	3.62E-02
164	GO:0008283: cell proliferation	3.84E-02
165	GO:0010114: response to red light	3.84E-02
166	GO:0009744: response to sucrose	3.84E-02
167	GO:0008643: carbohydrate transport	4.06E-02
168	GO:0009965: leaf morphogenesis	4.17E-02
169	GO:0006855: drug transmembrane transport	4.28E-02
170	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.39E-02
171	GO:0006364: rRNA processing	4.74E-02
172	GO:0006486: protein glycosylation	4.74E-02

Rank	GO Term	Adjusted P value
1	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
2	GO:0047631: ADP-ribose diphosphatase activity	3.81E-05
3	GO:0000210: NAD+ diphosphatase activity	5.65E-05
4	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.75E-04
5	GO:0004048: anthranilate phosphoribosyltransferase activity	1.75E-04
6	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	1.75E-04
7	GO:0004568: chitinase activity	2.90E-04
8	GO:0080041: ADP-ribose pyrophosphohydrolase activity	3.96E-04
9	GO:0017110: nucleoside-diphosphatase activity	3.96E-04
10	GO:0019172: glyoxalase III activity	3.96E-04
11	GO:0004338: glucan exo-1,3-beta-glucosidase activity	3.96E-04
12	GO:0004634: phosphopyruvate hydratase activity	3.96E-04
13	GO:0045543: gibberellin 2-beta-dioxygenase activity	3.96E-04
14	GO:0008061: chitin binding	5.54E-04
15	GO:0005507: copper ion binding	5.54E-04
16	GO:0001664: G-protein coupled receptor binding	6.47E-04
17	GO:0016531: copper chaperone activity	6.47E-04
18	GO:0004148: dihydrolipoyl dehydrogenase activity	6.47E-04
19	GO:0031683: G-protein beta/gamma-subunit complex binding	6.47E-04
20	GO:0004672: protein kinase activity	6.70E-04
21	GO:0005524: ATP binding	7.18E-04
22	GO:0051287: NAD binding	7.87E-04
23	GO:0017089: glycolipid transporter activity	9.23E-04
24	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	9.23E-04
25	GO:0035529: NADH pyrophosphatase activity	9.23E-04
26	GO:0004449: isocitrate dehydrogenase (NAD+) activity	9.23E-04
27	GO:0005509: calcium ion binding	9.50E-04
28	GO:0004674: protein serine/threonine kinase activity	1.16E-03
29	GO:0051861: glycolipid binding	1.22E-03
30	GO:0015145: monosaccharide transmembrane transporter activity	1.56E-03
31	GO:0000104: succinate dehydrogenase activity	1.56E-03
32	GO:0004871: signal transducer activity	1.71E-03
33	GO:0030976: thiamine pyrophosphate binding	1.91E-03
34	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.91E-03
35	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	1.91E-03
36	GO:0102391: decanoate--CoA ligase activity	2.30E-03
37	GO:0004012: phospholipid-translocating ATPase activity	2.30E-03
38	GO:0004144: diacylglycerol O-acyltransferase activity	2.30E-03
39	GO:0005516: calmodulin binding	2.49E-03
40	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.54E-03
41	GO:0016831: carboxy-lyase activity	2.70E-03
42	GO:0008506: sucrose:proton symporter activity	2.70E-03
43	GO:0008235: metalloexopeptidase activity	2.70E-03
44	GO:0004467: long-chain fatty acid-CoA ligase activity	2.70E-03
45	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.13E-03
46	GO:0050897: cobalt ion binding	3.51E-03
47	GO:0015112: nitrate transmembrane transporter activity	4.54E-03
48	GO:0000287: magnesium ion binding	4.71E-03
49	GO:0004364: glutathione transferase activity	4.75E-03
50	GO:0016301: kinase activity	4.87E-03
51	GO:0008171: O-methyltransferase activity	5.05E-03
52	GO:0004713: protein tyrosine kinase activity	5.05E-03
53	GO:0004177: aminopeptidase activity	5.58E-03
54	GO:0008378: galactosyltransferase activity	6.13E-03
55	GO:0008233: peptidase activity	6.21E-03
56	GO:0005262: calcium channel activity	6.70E-03
57	GO:0005388: calcium-transporting ATPase activity	6.70E-03
58	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.70E-03
59	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.28E-03
60	GO:0031625: ubiquitin protein ligase binding	7.38E-03
61	GO:0030552: cAMP binding	7.89E-03
62	GO:0004867: serine-type endopeptidase inhibitor activity	7.89E-03
63	GO:0030553: cGMP binding	7.89E-03
64	GO:0003712: transcription cofactor activity	7.89E-03
65	GO:0004190: aspartic-type endopeptidase activity	7.89E-03
66	GO:0005515: protein binding	9.23E-03
67	GO:0005216: ion channel activity	9.80E-03
68	GO:0004298: threonine-type endopeptidase activity	1.05E-02
69	GO:0033612: receptor serine/threonine kinase binding	1.05E-02
70	GO:0009055: electron carrier activity	1.14E-02
71	GO:0022891: substrate-specific transmembrane transporter activity	1.19E-02
72	GO:0008810: cellulase activity	1.19E-02
73	GO:0030551: cyclic nucleotide binding	1.41E-02
74	GO:0005249: voltage-gated potassium channel activity	1.41E-02
75	GO:0005355: glucose transmembrane transporter activity	1.56E-02
76	GO:0008237: metallopeptidase activity	2.06E-02
77	GO:0046872: metal ion binding	2.09E-02
78	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.42E-02
79	GO:0004842: ubiquitin-protein transferase activity	2.46E-02
80	GO:0030247: polysaccharide binding	2.52E-02
81	GO:0004683: calmodulin-dependent protein kinase activity	2.52E-02
82	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.61E-02
83	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.71E-02
84	GO:0015238: drug transmembrane transporter activity	2.80E-02
85	GO:0004222: metalloendopeptidase activity	2.90E-02
86	GO:0050660: flavin adenine dinucleotide binding	2.95E-02
87	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.00E-02
88	GO:0003746: translation elongation factor activity	3.20E-02
89	GO:0000987: core promoter proximal region sequence-specific DNA binding	3.31E-02
90	GO:0061630: ubiquitin protein ligase activity	3.33E-02
91	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.41E-02
92	GO:0005525: GTP binding	4.00E-02
93	GO:0051537: 2 iron, 2 sulfur cluster binding	4.06E-02
94	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.08E-02
95	GO:0015293: symporter activity	4.17E-02
96	GO:0016298: lipase activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	8.71E-09
2	GO:0005758: mitochondrial intermembrane space	7.28E-07
3	GO:0031351: integral component of plastid membrane	1.75E-04
4	GO:0005740: mitochondrial envelope	2.90E-04
5	GO:0000015: phosphopyruvate hydratase complex	3.96E-04
6	GO:0005901: caveola	3.96E-04
7	GO:0005741: mitochondrial outer membrane	8.23E-04
8	GO:0005747: mitochondrial respiratory chain complex I	1.15E-03
9	GO:0005834: heterotrimeric G-protein complex	1.19E-03
10	GO:0005773: vacuole	1.40E-03
11	GO:0005774: vacuolar membrane	1.44E-03
12	GO:0031225: anchored component of membrane	2.65E-03
13	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3.13E-03
14	GO:0019773: proteasome core complex, alpha-subunit complex	3.58E-03
15	GO:0046658: anchored component of plasma membrane	3.96E-03
16	GO:0048046: apoplast	4.84E-03
17	GO:0005829: cytosol	5.94E-03
18	GO:0031012: extracellular matrix	6.70E-03
19	GO:0005739: mitochondrion	8.51E-03
20	GO:0070469: respiratory chain	9.80E-03
21	GO:0045271: respiratory chain complex I	9.80E-03
22	GO:0005839: proteasome core complex	1.05E-02
23	GO:0009507: chloroplast	1.38E-02
24	GO:0009506: plasmodesma	1.41E-02
25	GO:0005887: integral component of plasma membrane	1.54E-02
26	GO:0005618: cell wall	1.65E-02
27	GO:0016021: integral component of membrane	1.77E-02
28	GO:0005783: endoplasmic reticulum	1.94E-02
29	GO:0019005: SCF ubiquitin ligase complex	2.71E-02
30	GO:0000151: ubiquitin ligase complex	2.71E-02
31	GO:0005643: nuclear pore	2.71E-02
32	GO:0016020: membrane	3.17E-02
33	GO:0090406: pollen tube	3.84E-02
34	GO:0031966: mitochondrial membrane	4.51E-02
35	GO:0000502: proteasome complex	4.74E-02