co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G64490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043269: regulation of ion transport	0.00E+00
2	GO:0000162: tryptophan biosynthetic process	1.22E-09
3	GO:0080120: CAAX-box protein maturation	2.30E-05
4	GO:0071586: CAAX-box protein processing	2.30E-05
5	GO:0002215: defense response to nematode	5.89E-05
6	GO:0060919: auxin influx	5.89E-05
7	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.04E-04
8	GO:0009851: auxin biosynthetic process	1.06E-04
9	GO:0019438: aromatic compound biosynthetic process	1.55E-04
10	GO:0010107: potassium ion import	2.12E-04
11	GO:0010363: regulation of plant-type hypersensitive response	2.12E-04
12	GO:0010600: regulation of auxin biosynthetic process	2.12E-04
13	GO:0009817: defense response to fungus, incompatible interaction	2.25E-04
14	GO:0033365: protein localization to organelle	3.37E-04
15	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	3.37E-04
16	GO:0010315: auxin efflux	3.37E-04
17	GO:0080027: response to herbivore	4.74E-04
18	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.46E-04
19	GO:0034765: regulation of ion transmembrane transport	6.98E-04
20	GO:0090333: regulation of stomatal closure	6.98E-04
21	GO:0007064: mitotic sister chromatid cohesion	8.59E-04
22	GO:0006032: chitin catabolic process	8.59E-04
23	GO:0000272: polysaccharide catabolic process	9.42E-04
24	GO:0052544: defense response by callose deposition in cell wall	9.42E-04
25	GO:0006446: regulation of translational initiation	1.20E-03
26	GO:0010540: basipetal auxin transport	1.20E-03
27	GO:0006541: glutamine metabolic process	1.20E-03
28	GO:0042343: indole glucosinolate metabolic process	1.30E-03
29	GO:0009617: response to bacterium	1.38E-03
30	GO:0010468: regulation of gene expression	1.38E-03
31	GO:0080147: root hair cell development	1.49E-03
32	GO:0009651: response to salt stress	1.56E-03
33	GO:0016998: cell wall macromolecule catabolic process	1.70E-03
34	GO:0030433: ubiquitin-dependent ERAD pathway	1.80E-03
35	GO:0009723: response to ethylene	2.05E-03
36	GO:0000413: protein peptidyl-prolyl isomerization	2.24E-03
37	GO:0042391: regulation of membrane potential	2.24E-03
38	GO:0048544: recognition of pollen	2.48E-03
39	GO:0009630: gravitropism	2.84E-03
40	GO:0032259: methylation	3.08E-03
41	GO:0001666: response to hypoxia	3.48E-03
42	GO:0009615: response to virus	3.48E-03
43	GO:0009627: systemic acquired resistance	3.75E-03
44	GO:0048767: root hair elongation	4.32E-03
45	GO:0010311: lateral root formation	4.32E-03
46	GO:0006811: ion transport	4.46E-03
47	GO:0010043: response to zinc ion	4.60E-03
48	GO:0006813: potassium ion transport	7.18E-03
49	GO:0051603: proteolysis involved in cellular protein catabolic process	7.35E-03
50	GO:0006511: ubiquitin-dependent protein catabolic process	7.70E-03
51	GO:0009626: plant-type hypersensitive response	8.42E-03
52	GO:0006414: translational elongation	8.45E-03
53	GO:0042742: defense response to bacterium	1.15E-02
54	GO:0031640: killing of cells of other organism	1.20E-02
55	GO:0006413: translational initiation	1.28E-02
56	GO:0080167: response to karrikin	2.14E-02
57	GO:0015979: photosynthesis	2.35E-02
58	GO:0008152: metabolic process	3.03E-02
59	GO:0009873: ethylene-activated signaling pathway	3.39E-02
60	GO:0009735: response to cytokinin	3.99E-02
61	GO:0009611: response to wounding	4.32E-02

Rank	GO Term	Adjusted P value
1	GO:0004049: anthranilate synthase activity	1.55E-07
2	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.30E-05
3	GO:0033984: indole-3-glycerol-phosphate lyase activity	2.30E-05
4	GO:0008061: chitin binding	3.12E-05
5	GO:0004324: ferredoxin-NADP+ reductase activity	1.04E-04
6	GO:0019003: GDP binding	1.04E-04
7	GO:0004834: tryptophan synthase activity	2.12E-04
8	GO:0010328: auxin influx transmembrane transporter activity	2.12E-04
9	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.14E-04
10	GO:0003746: translation elongation factor activity	2.87E-04
11	GO:0036402: proteasome-activating ATPase activity	3.37E-04
12	GO:0004656: procollagen-proline 4-dioxygenase activity	4.04E-04
13	GO:0005242: inward rectifier potassium channel activity	4.04E-04
14	GO:0043022: ribosome binding	5.46E-04
15	GO:0015288: porin activity	5.46E-04
16	GO:0004568: chitinase activity	8.59E-04
17	GO:0008171: O-methyltransferase activity	8.59E-04
18	GO:0010329: auxin efflux transmembrane transporter activity	1.12E-03
19	GO:0015266: protein channel activity	1.12E-03
20	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.20E-03
21	GO:0004175: endopeptidase activity	1.20E-03
22	GO:0017025: TBP-class protein binding	1.30E-03
23	GO:0031418: L-ascorbic acid binding	1.49E-03
24	GO:0004298: threonine-type endopeptidase activity	1.70E-03
25	GO:0004540: ribonuclease activity	1.70E-03
26	GO:0008168: methyltransferase activity	1.71E-03
27	GO:0030551: cyclic nucleotide binding	2.24E-03
28	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.17E-03
29	GO:0004222: metalloendopeptidase activity	4.46E-03
30	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.90E-03
31	GO:0004364: glutathione transferase activity	5.68E-03
32	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.49E-03
33	GO:0005507: copper ion binding	8.07E-03
34	GO:0008194: UDP-glycosyltransferase activity	1.46E-02
35	GO:0003743: translation initiation factor activity	1.50E-02
36	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.60E-02
37	GO:0042802: identical protein binding	1.60E-02
38	GO:0016301: kinase activity	1.79E-02
39	GO:0003682: chromatin binding	1.91E-02
40	GO:0008233: peptidase activity	2.11E-02
41	GO:0042803: protein homodimerization activity	2.52E-02
42	GO:0003924: GTPase activity	2.83E-02
43	GO:0005524: ATP binding	2.88E-02
44	GO:0016887: ATPase activity	3.86E-02

Rank	GO Term	Adjusted P value
1	GO:0032783: ELL-EAF complex	2.30E-05
2	GO:0005950: anthranilate synthase complex	5.89E-05
3	GO:0005853: eukaryotic translation elongation factor 1 complex	1.04E-04
4	GO:0009527: plastid outer membrane	2.12E-04
5	GO:0005774: vacuolar membrane	3.03E-04
6	GO:0031597: cytosolic proteasome complex	4.04E-04
7	GO:0005829: cytosol	4.74E-04
8	GO:0031595: nuclear proteasome complex	4.74E-04
9	GO:0000502: proteasome complex	4.95E-04
10	GO:0046930: pore complex	6.21E-04
11	GO:0005773: vacuole	6.55E-04
12	GO:0008540: proteasome regulatory particle, base subcomplex	7.77E-04
13	GO:0005852: eukaryotic translation initiation factor 3 complex	9.42E-04
14	GO:0030176: integral component of endoplasmic reticulum membrane	1.30E-03
15	GO:0005839: proteasome core complex	1.70E-03
16	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.02E-03
17	GO:0009707: chloroplast outer membrane	4.17E-03
18	GO:0000325: plant-type vacuole	4.60E-03
19	GO:0005783: endoplasmic reticulum	4.75E-03
20	GO:0005615: extracellular space	1.46E-02
21	GO:0005789: endoplasmic reticulum membrane	1.76E-02
22	GO:0009570: chloroplast stroma	1.88E-02
23	GO:0005887: integral component of plasma membrane	3.51E-02
24	GO:0005618: cell wall	4.55E-02