co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G64390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006907: pinocytosis	0.00E+00
2	GO:0006571: tyrosine biosynthetic process	1.62E-04
3	GO:0010239: chloroplast mRNA processing	1.62E-04
4	GO:0015995: chlorophyll biosynthetic process	2.15E-04
5	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.39E-04
6	GO:0009697: salicylic acid biosynthetic process	2.84E-04
7	GO:0010438: cellular response to sulfur starvation	2.84E-04
8	GO:0009759: indole glucosinolate biosynthetic process	3.51E-04
9	GO:0042372: phylloquinone biosynthetic process	4.20E-04
10	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	4.20E-04
11	GO:0009094: L-phenylalanine biosynthetic process	4.20E-04
12	GO:1901259: chloroplast rRNA processing	4.20E-04
13	GO:0006353: DNA-templated transcription, termination	5.68E-04
14	GO:0022900: electron transport chain	6.45E-04
15	GO:0009735: response to cytokinin	7.01E-04
16	GO:0009742: brassinosteroid mediated signaling pathway	7.78E-04
17	GO:0006779: porphyrin-containing compound biosynthetic process	8.07E-04
18	GO:0006782: protoporphyrinogen IX biosynthetic process	8.92E-04
19	GO:0009058: biosynthetic process	9.57E-04
20	GO:0006913: nucleocytoplasmic transport	9.78E-04
21	GO:0002213: defense response to insect	1.07E-03
22	GO:0045490: pectin catabolic process	1.23E-03
23	GO:0048768: root hair cell tip growth	1.25E-03
24	GO:0000162: tryptophan biosynthetic process	1.45E-03
25	GO:0016998: cell wall macromolecule catabolic process	1.76E-03
26	GO:0010017: red or far-red light signaling pathway	1.87E-03
27	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.98E-03
28	GO:0080022: primary root development	2.33E-03
29	GO:0009958: positive gravitropism	2.45E-03
30	GO:0042752: regulation of circadian rhythm	2.57E-03
31	GO:0015979: photosynthesis	2.65E-03
32	GO:0009828: plant-type cell wall loosening	3.22E-03
33	GO:0000910: cytokinesis	3.49E-03
34	GO:0016126: sterol biosynthetic process	3.63E-03
35	GO:0009753: response to jasmonic acid	3.65E-03
36	GO:0010411: xyloglucan metabolic process	4.05E-03
37	GO:0000160: phosphorelay signal transduction system	4.49E-03
38	GO:0010114: response to red light	6.08E-03
39	GO:0006468: protein phosphorylation	6.08E-03
40	GO:0042546: cell wall biogenesis	6.25E-03
41	GO:0009664: plant-type cell wall organization	7.11E-03
42	GO:0009736: cytokinin-activated signaling pathway	7.47E-03
43	GO:0009809: lignin biosynthetic process	7.47E-03
44	GO:0042545: cell wall modification	9.36E-03
45	GO:0009624: response to nematode	9.56E-03
46	GO:0030154: cell differentiation	1.33E-02
47	GO:0040008: regulation of growth	1.36E-02
48	GO:0007623: circadian rhythm	1.40E-02
49	GO:0009451: RNA modification	1.43E-02
50	GO:0007166: cell surface receptor signaling pathway	1.54E-02
51	GO:0009826: unidimensional cell growth	1.86E-02
52	GO:0080167: response to karrikin	2.23E-02
53	GO:0046777: protein autophosphorylation	2.34E-02
54	GO:0006357: regulation of transcription from RNA polymerase II promoter	3.60E-02
55	GO:0016567: protein ubiquitination	3.72E-02
56	GO:0051301: cell division	4.71E-02
57	GO:0045893: positive regulation of transcription, DNA-templated	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0047661: amino-acid racemase activity	0.00E+00
2	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
3	GO:0008909: isochorismate synthase activity	2.41E-05
4	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	2.41E-05
5	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	2.41E-05
6	GO:0016851: magnesium chelatase activity	1.62E-04
7	GO:0047769: arogenate dehydratase activity	2.21E-04
8	GO:0004664: prephenate dehydratase activity	2.21E-04
9	GO:0052747: sinapyl alcohol dehydrogenase activity	5.68E-04
10	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.07E-03
11	GO:0030570: pectate lyase activity	1.98E-03
12	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.82E-03
13	GO:0004674: protein serine/threonine kinase activity	3.06E-03
14	GO:0000156: phosphorelay response regulator activity	3.08E-03
15	GO:0008483: transaminase activity	3.35E-03
16	GO:0016597: amino acid binding	3.49E-03
17	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.05E-03
18	GO:0008236: serine-type peptidase activity	4.20E-03
19	GO:0051537: 2 iron, 2 sulfur cluster binding	6.42E-03
20	GO:0043621: protein self-association	6.42E-03
21	GO:0045330: aspartyl esterase activity	8.02E-03
22	GO:0030599: pectinesterase activity	9.16E-03
23	GO:0019843: rRNA binding	1.12E-02
24	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.14E-02
25	GO:0016829: lyase activity	1.18E-02
26	GO:0030170: pyridoxal phosphate binding	1.20E-02
27	GO:0004252: serine-type endopeptidase activity	1.20E-02
28	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.34E-02
29	GO:0046910: pectinesterase inhibitor activity	1.34E-02
30	GO:0004672: protein kinase activity	1.80E-02
31	GO:0004497: monooxygenase activity	2.23E-02
32	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.54E-02
33	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.74E-02
34	GO:0009055: electron carrier activity	3.10E-02
35	GO:0004519: endonuclease activity	3.13E-02
36	GO:0016887: ATPase activity	4.03E-02

Rank	GO Term	Adjusted P value
1	GO:0005618: cell wall	6.49E-05
2	GO:0010007: magnesium chelatase complex	1.09E-04
3	GO:0009505: plant-type cell wall	3.88E-04
4	GO:0005578: proteinaceous extracellular matrix	1.16E-03
5	GO:0030095: chloroplast photosystem II	1.25E-03
6	GO:0005576: extracellular region	2.23E-03
7	GO:0009523: photosystem II	2.70E-03
8	GO:0009570: chloroplast stroma	4.73E-03
9	GO:0009706: chloroplast inner membrane	9.56E-03
10	GO:0048046: apoplast	9.60E-03
11	GO:0009543: chloroplast thylakoid lumen	1.12E-02
12	GO:0009507: chloroplast	2.15E-02
13	GO:0009535: chloroplast thylakoid membrane	2.74E-02
14	GO:0043231: intracellular membrane-bounded organelle	3.16E-02
15	GO:0009506: plasmodesma	4.84E-02