GO Enrichment Analysis of Co-expressed Genes with
AT1G62750
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 2 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 3 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 4 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 5 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.58E-07 |
| 6 | GO:0006000: fructose metabolic process | 9.92E-07 |
| 7 | GO:0009773: photosynthetic electron transport in photosystem I | 1.05E-06 |
| 8 | GO:0006094: gluconeogenesis | 1.73E-06 |
| 9 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.38E-06 |
| 10 | GO:0016117: carotenoid biosynthetic process | 1.01E-05 |
| 11 | GO:0015979: photosynthesis | 1.62E-05 |
| 12 | GO:0006002: fructose 6-phosphate metabolic process | 3.92E-05 |
| 13 | GO:0051775: response to redox state | 6.74E-05 |
| 14 | GO:0071277: cellular response to calcium ion | 6.74E-05 |
| 15 | GO:0009443: pyridoxal 5'-phosphate salvage | 6.74E-05 |
| 16 | GO:0018119: peptidyl-cysteine S-nitrosylation | 8.50E-05 |
| 17 | GO:0009658: chloroplast organization | 1.07E-04 |
| 18 | GO:0005986: sucrose biosynthetic process | 1.15E-04 |
| 19 | GO:0019253: reductive pentose-phosphate cycle | 1.31E-04 |
| 20 | GO:0006810: transport | 1.59E-04 |
| 21 | GO:0006729: tetrahydrobiopterin biosynthetic process | 1.62E-04 |
| 22 | GO:0071492: cellular response to UV-A | 2.75E-04 |
| 23 | GO:0006696: ergosterol biosynthetic process | 2.75E-04 |
| 24 | GO:0007231: osmosensory signaling pathway | 3.98E-04 |
| 25 | GO:0006107: oxaloacetate metabolic process | 3.98E-04 |
| 26 | GO:0043572: plastid fission | 3.98E-04 |
| 27 | GO:0071486: cellular response to high light intensity | 5.32E-04 |
| 28 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.32E-04 |
| 29 | GO:0009765: photosynthesis, light harvesting | 5.32E-04 |
| 30 | GO:0045727: positive regulation of translation | 5.32E-04 |
| 31 | GO:0033500: carbohydrate homeostasis | 5.32E-04 |
| 32 | GO:0006546: glycine catabolic process | 5.32E-04 |
| 33 | GO:0006734: NADH metabolic process | 5.32E-04 |
| 34 | GO:0009902: chloroplast relocation | 5.32E-04 |
| 35 | GO:0006542: glutamine biosynthetic process | 5.32E-04 |
| 36 | GO:0019676: ammonia assimilation cycle | 5.32E-04 |
| 37 | GO:0016123: xanthophyll biosynthetic process | 6.73E-04 |
| 38 | GO:0048359: mucilage metabolic process involved in seed coat development | 6.73E-04 |
| 39 | GO:0016120: carotene biosynthetic process | 6.73E-04 |
| 40 | GO:0006656: phosphatidylcholine biosynthetic process | 6.73E-04 |
| 41 | GO:0005975: carbohydrate metabolic process | 8.71E-04 |
| 42 | GO:0010196: nonphotochemical quenching | 1.14E-03 |
| 43 | GO:0007155: cell adhesion | 1.32E-03 |
| 44 | GO:0070413: trehalose metabolism in response to stress | 1.32E-03 |
| 45 | GO:0009704: de-etiolation | 1.32E-03 |
| 46 | GO:0032544: plastid translation | 1.50E-03 |
| 47 | GO:0017004: cytochrome complex assembly | 1.50E-03 |
| 48 | GO:0045454: cell redox homeostasis | 1.53E-03 |
| 49 | GO:0006098: pentose-phosphate shunt | 1.69E-03 |
| 50 | GO:0090333: regulation of stomatal closure | 1.69E-03 |
| 51 | GO:0006259: DNA metabolic process | 2.10E-03 |
| 52 | GO:0010192: mucilage biosynthetic process | 2.10E-03 |
| 53 | GO:0006816: calcium ion transport | 2.31E-03 |
| 54 | GO:0006265: DNA topological change | 2.31E-03 |
| 55 | GO:0043085: positive regulation of catalytic activity | 2.31E-03 |
| 56 | GO:0000272: polysaccharide catabolic process | 2.31E-03 |
| 57 | GO:0006108: malate metabolic process | 2.76E-03 |
| 58 | GO:0010020: chloroplast fission | 2.99E-03 |
| 59 | GO:0010207: photosystem II assembly | 2.99E-03 |
| 60 | GO:0005985: sucrose metabolic process | 3.23E-03 |
| 61 | GO:0070588: calcium ion transmembrane transport | 3.23E-03 |
| 62 | GO:0009735: response to cytokinin | 3.67E-03 |
| 63 | GO:0005992: trehalose biosynthetic process | 3.73E-03 |
| 64 | GO:0009611: response to wounding | 4.23E-03 |
| 65 | GO:0061077: chaperone-mediated protein folding | 4.26E-03 |
| 66 | GO:0009294: DNA mediated transformation | 4.81E-03 |
| 67 | GO:0055085: transmembrane transport | 5.57E-03 |
| 68 | GO:0042631: cellular response to water deprivation | 5.68E-03 |
| 69 | GO:0006662: glycerol ether metabolic process | 5.98E-03 |
| 70 | GO:0007059: chromosome segregation | 6.28E-03 |
| 71 | GO:0019252: starch biosynthetic process | 6.60E-03 |
| 72 | GO:0007264: small GTPase mediated signal transduction | 7.24E-03 |
| 73 | GO:0010090: trichome morphogenesis | 7.57E-03 |
| 74 | GO:0010027: thylakoid membrane organization | 8.93E-03 |
| 75 | GO:0042742: defense response to bacterium | 1.01E-02 |
| 76 | GO:0071555: cell wall organization | 1.01E-02 |
| 77 | GO:0055114: oxidation-reduction process | 1.05E-02 |
| 78 | GO:0009817: defense response to fungus, incompatible interaction | 1.08E-02 |
| 79 | GO:0018298: protein-chromophore linkage | 1.08E-02 |
| 80 | GO:0007568: aging | 1.19E-02 |
| 81 | GO:0032259: methylation | 1.21E-02 |
| 82 | GO:0016051: carbohydrate biosynthetic process | 1.27E-02 |
| 83 | GO:0006099: tricarboxylic acid cycle | 1.31E-02 |
| 84 | GO:0034599: cellular response to oxidative stress | 1.31E-02 |
| 85 | GO:0006839: mitochondrial transport | 1.39E-02 |
| 86 | GO:0009644: response to high light intensity | 1.61E-02 |
| 87 | GO:0046686: response to cadmium ion | 1.77E-02 |
| 88 | GO:0006364: rRNA processing | 1.88E-02 |
| 89 | GO:0006096: glycolytic process | 2.12E-02 |
| 90 | GO:0009416: response to light stimulus | 2.26E-02 |
| 91 | GO:0007623: circadian rhythm | 3.57E-02 |
| 92 | GO:0010468: regulation of gene expression | 4.04E-02 |
| 93 | GO:0009617: response to bacterium | 4.04E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 0.00E+00 |
| 2 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 3 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 4 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 5 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 6 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 7 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 8 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 9 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 10 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 11 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.58E-07 |
| 12 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.57E-06 |
| 13 | GO:0051753: mannan synthase activity | 1.69E-05 |
| 14 | GO:0048038: quinone binding | 1.87E-05 |
| 15 | GO:0051996: squalene synthase activity | 6.74E-05 |
| 16 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 6.74E-05 |
| 17 | GO:0008746: NAD(P)+ transhydrogenase activity | 6.74E-05 |
| 18 | GO:0008967: phosphoglycolate phosphatase activity | 1.62E-04 |
| 19 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.62E-04 |
| 20 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 1.62E-04 |
| 21 | GO:0010297: heteropolysaccharide binding | 1.62E-04 |
| 22 | GO:0003913: DNA photolyase activity | 2.75E-04 |
| 23 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.75E-04 |
| 24 | GO:0070402: NADPH binding | 2.75E-04 |
| 25 | GO:0022891: substrate-specific transmembrane transporter activity | 2.77E-04 |
| 26 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 3.98E-04 |
| 27 | GO:0004356: glutamate-ammonia ligase activity | 6.73E-04 |
| 28 | GO:0016168: chlorophyll binding | 7.08E-04 |
| 29 | GO:0004332: fructose-bisphosphate aldolase activity | 8.23E-04 |
| 30 | GO:0042578: phosphoric ester hydrolase activity | 8.23E-04 |
| 31 | GO:0016615: malate dehydrogenase activity | 8.23E-04 |
| 32 | GO:0004222: metalloendopeptidase activity | 9.50E-04 |
| 33 | GO:0051920: peroxiredoxin activity | 9.79E-04 |
| 34 | GO:0030060: L-malate dehydrogenase activity | 9.79E-04 |
| 35 | GO:0009881: photoreceptor activity | 1.14E-03 |
| 36 | GO:0016209: antioxidant activity | 1.32E-03 |
| 37 | GO:0004033: aldo-keto reductase (NADP) activity | 1.32E-03 |
| 38 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 1.50E-03 |
| 39 | GO:0008047: enzyme activator activity | 2.10E-03 |
| 40 | GO:0004805: trehalose-phosphatase activity | 2.10E-03 |
| 41 | GO:0004565: beta-galactosidase activity | 2.76E-03 |
| 42 | GO:0005262: calcium channel activity | 2.76E-03 |
| 43 | GO:0005528: FK506 binding | 3.73E-03 |
| 44 | GO:0004176: ATP-dependent peptidase activity | 4.26E-03 |
| 45 | GO:0047134: protein-disulfide reductase activity | 5.38E-03 |
| 46 | GO:0004791: thioredoxin-disulfide reductase activity | 6.28E-03 |
| 47 | GO:0050662: coenzyme binding | 6.28E-03 |
| 48 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.57E-03 |
| 49 | GO:0016791: phosphatase activity | 7.90E-03 |
| 50 | GO:0016759: cellulose synthase activity | 7.90E-03 |
| 51 | GO:0008237: metallopeptidase activity | 8.24E-03 |
| 52 | GO:0003824: catalytic activity | 1.13E-02 |
| 53 | GO:0050897: cobalt ion binding | 1.19E-02 |
| 54 | GO:0016757: transferase activity, transferring glycosyl groups | 1.33E-02 |
| 55 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.70E-02 |
| 56 | GO:0015035: protein disulfide oxidoreductase activity | 2.47E-02 |
| 57 | GO:0019843: rRNA binding | 2.84E-02 |
| 58 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.89E-02 |
| 59 | GO:0030246: carbohydrate binding | 3.04E-02 |
| 60 | GO:0008168: methyltransferase activity | 4.73E-02 |
| 61 | GO:0004601: peroxidase activity | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.57E-25 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 8.57E-17 |
| 5 | GO:0009579: thylakoid | 4.42E-12 |
| 6 | GO:0009570: chloroplast stroma | 8.57E-11 |
| 7 | GO:0009941: chloroplast envelope | 1.69E-09 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.98E-09 |
| 9 | GO:0048046: apoplast | 6.39E-06 |
| 10 | GO:0009534: chloroplast thylakoid | 1.64E-05 |
| 11 | GO:0010287: plastoglobule | 2.29E-05 |
| 12 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.62E-04 |
| 13 | GO:0009706: chloroplast inner membrane | 2.70E-04 |
| 14 | GO:0005960: glycine cleavage complex | 3.98E-04 |
| 15 | GO:0009523: photosystem II | 4.39E-04 |
| 16 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 5.32E-04 |
| 17 | GO:0009517: PSII associated light-harvesting complex II | 5.32E-04 |
| 18 | GO:0010319: stromule | 6.01E-04 |
| 19 | GO:0009539: photosystem II reaction center | 1.50E-03 |
| 20 | GO:0016021: integral component of membrane | 3.15E-03 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 3.99E-03 |
| 22 | GO:0042651: thylakoid membrane | 3.99E-03 |
| 23 | GO:0009295: nucleoid | 8.24E-03 |
| 24 | GO:0031969: chloroplast membrane | 8.57E-03 |
| 25 | GO:0009707: chloroplast outer membrane | 1.08E-02 |
| 26 | GO:0009536: plastid | 1.31E-02 |
| 27 | GO:0031977: thylakoid lumen | 1.44E-02 |
| 28 | GO:0000139: Golgi membrane | 1.48E-02 |
| 29 | GO:0022626: cytosolic ribosome | 2.16E-02 |
| 30 | GO:0005747: mitochondrial respiratory chain complex I | 2.17E-02 |
| 31 | GO:0009543: chloroplast thylakoid lumen | 2.84E-02 |
| 32 | GO:0005623: cell | 2.89E-02 |
| 33 | GO:0005759: mitochondrial matrix | 3.33E-02 |
| 34 | GO:0046658: anchored component of plasma membrane | 4.35E-02 |