co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G62710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032497: detection of lipopolysaccharide	0.00E+00
2	GO:0019484: beta-alanine catabolic process	0.00E+00
3	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
4	GO:0006105: succinate metabolic process	0.00E+00
5	GO:0009865: pollen tube adhesion	2.41E-05
6	GO:0006540: glutamate decarboxylation to succinate	2.41E-05
7	GO:0009450: gamma-aminobutyric acid catabolic process	2.41E-05
8	GO:1902000: homogentisate catabolic process	6.16E-05
9	GO:0019441: tryptophan catabolic process to kynurenine	6.16E-05
10	GO:0010033: response to organic substance	6.16E-05
11	GO:0030029: actin filament-based process	1.09E-04
12	GO:0009072: aromatic amino acid family metabolic process	1.09E-04
13	GO:0006572: tyrosine catabolic process	1.62E-04
14	GO:0006020: inositol metabolic process	1.62E-04
15	GO:0006536: glutamate metabolic process	2.21E-04
16	GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain	2.21E-04
17	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	3.51E-04
18	GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity	4.20E-04
19	GO:0006694: steroid biosynthetic process	4.20E-04
20	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.20E-04
21	GO:0009094: L-phenylalanine biosynthetic process	4.20E-04
22	GO:0031930: mitochondria-nucleus signaling pathway	4.20E-04
23	GO:0006002: fructose 6-phosphate metabolic process	6.45E-04
24	GO:0009626: plant-type hypersensitive response	6.55E-04
25	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	8.07E-04
26	GO:0009688: abscisic acid biosynthetic process	8.92E-04
27	GO:0018107: peptidyl-threonine phosphorylation	1.16E-03
28	GO:0009725: response to hormone	1.16E-03
29	GO:0006541: glutamine metabolic process	1.25E-03
30	GO:0010167: response to nitrate	1.35E-03
31	GO:0005985: sucrose metabolic process	1.35E-03
32	GO:0034976: response to endoplasmic reticulum stress	1.45E-03
33	GO:0045333: cellular respiration	1.55E-03
34	GO:0048366: leaf development	2.21E-03
35	GO:0010154: fruit development	2.45E-03
36	GO:0046777: protein autophosphorylation	2.48E-03
37	GO:0048544: recognition of pollen	2.57E-03
38	GO:0009749: response to glucose	2.70E-03
39	GO:0009851: auxin biosynthetic process	2.70E-03
40	GO:0010183: pollen tube guidance	2.70E-03
41	GO:0010090: trichome morphogenesis	3.08E-03
42	GO:0048364: root development	3.55E-03
43	GO:0009615: response to virus	3.63E-03
44	GO:0016126: sterol biosynthetic process	3.63E-03
45	GO:0008219: cell death	4.34E-03
46	GO:0006811: ion transport	4.64E-03
47	GO:0009910: negative regulation of flower development	4.80E-03
48	GO:0045087: innate immune response	5.11E-03
49	GO:0009744: response to sucrose	6.08E-03
50	GO:0035556: intracellular signal transduction	6.35E-03
51	GO:0045893: positive regulation of transcription, DNA-templated	6.90E-03
52	GO:0009809: lignin biosynthetic process	7.47E-03
53	GO:0006096: glycolytic process	8.40E-03
54	GO:0048367: shoot system development	8.59E-03
55	GO:0018105: peptidyl-serine phosphorylation	9.75E-03
56	GO:0051726: regulation of cell cycle	9.96E-03
57	GO:0042742: defense response to bacterium	1.22E-02
58	GO:0006470: protein dephosphorylation	1.54E-02
59	GO:0006810: transport	1.80E-02
60	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	1.81E-02
61	GO:0009860: pollen tube growth	2.02E-02
62	GO:0007049: cell cycle	2.07E-02
63	GO:0016192: vesicle-mediated transport	2.31E-02
64	GO:0007275: multicellular organism development	2.41E-02
65	GO:0007165: signal transduction	2.55E-02
66	GO:0009873: ethylene-activated signaling pathway	3.54E-02
67	GO:0006508: proteolysis	3.75E-02
68	GO:0006351: transcription, DNA-templated	4.26E-02
69	GO:0055114: oxidation-reduction process	4.71E-02
70	GO:0051301: cell division	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0010293: abscisic aldehyde oxidase activity	0.00E+00
2	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
3	GO:0004334: fumarylacetoacetase activity	0.00E+00
4	GO:0004112: cyclic-nucleotide phosphodiesterase activity	2.41E-05
5	GO:0003867: 4-aminobutyrate transaminase activity	2.41E-05
6	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	6.16E-05
7	GO:0004061: arylformamidase activity	6.16E-05
8	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	1.09E-04
9	GO:0004031: aldehyde oxidase activity	2.21E-04
10	GO:0050302: indole-3-acetaldehyde oxidase activity	2.21E-04
11	GO:0009916: alternative oxidase activity	2.21E-04
12	GO:0047769: arogenate dehydratase activity	2.21E-04
13	GO:0004664: prephenate dehydratase activity	2.21E-04
14	GO:0003872: 6-phosphofructokinase activity	4.92E-04
15	GO:0052747: sinapyl alcohol dehydrogenase activity	5.68E-04
16	GO:0031625: ubiquitin protein ligase binding	5.78E-04
17	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.07E-03
18	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	2.45E-03
19	GO:0004872: receptor activity	2.70E-03
20	GO:0005200: structural constituent of cytoskeleton	3.35E-03
21	GO:0016597: amino acid binding	3.49E-03
22	GO:0005096: GTPase activator activity	4.49E-03
23	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.64E-03
24	GO:0004222: metalloendopeptidase activity	4.64E-03
25	GO:0050897: cobalt ion binding	4.80E-03
26	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.80E-03
27	GO:0051537: 2 iron, 2 sulfur cluster binding	6.42E-03
28	GO:0005516: calmodulin binding	9.05E-03
29	GO:0030170: pyridoxal phosphate binding	1.20E-02
30	GO:0004252: serine-type endopeptidase activity	1.20E-02
31	GO:0004674: protein serine/threonine kinase activity	1.41E-02
32	GO:0043565: sequence-specific DNA binding	1.48E-02
33	GO:0004672: protein kinase activity	1.80E-02
34	GO:0046982: protein heterodimerization activity	1.89E-02
35	GO:0050660: flavin adenine dinucleotide binding	2.12E-02
36	GO:0004722: protein serine/threonine phosphatase activity	2.71E-02
37	GO:0003924: GTPase activity	2.95E-02
38	GO:0009055: electron carrier activity	3.10E-02
39	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.08E-02

Rank	GO Term	Adjusted P value
1	GO:0005945: 6-phosphofructokinase complex	2.84E-04
2	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	6.45E-04
3	GO:0070469: respiratory chain	1.65E-03
4	GO:0000786: nucleosome	4.95E-03
5	GO:0010008: endosome membrane	8.59E-03
6	GO:0005886: plasma membrane	1.27E-02
7	GO:0005789: endoplasmic reticulum membrane	1.87E-02
8	GO:0005783: endoplasmic reticulum	2.19E-02
9	GO:0005743: mitochondrial inner membrane	2.80E-02
10	GO:0005777: peroxisome	4.89E-02