GO Enrichment Analysis of Co-expressed Genes with
AT1G62610
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000390: spliceosomal complex disassembly | 0.00E+00 |
| 2 | GO:0019484: beta-alanine catabolic process | 0.00E+00 |
| 3 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 4 | GO:0009448: gamma-aminobutyric acid metabolic process | 0.00E+00 |
| 5 | GO:0006105: succinate metabolic process | 0.00E+00 |
| 6 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 7 | GO:0060213: positive regulation of nuclear-transcribed mRNA poly(A) tail shortening | 0.00E+00 |
| 8 | GO:0019478: D-amino acid catabolic process | 1.35E-04 |
| 9 | GO:0009865: pollen tube adhesion | 1.35E-04 |
| 10 | GO:0006540: glutamate decarboxylation to succinate | 1.35E-04 |
| 11 | GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic | 1.35E-04 |
| 12 | GO:0035266: meristem growth | 1.35E-04 |
| 13 | GO:0009450: gamma-aminobutyric acid catabolic process | 1.35E-04 |
| 14 | GO:0007292: female gamete generation | 1.35E-04 |
| 15 | GO:0045948: positive regulation of translational initiation | 3.11E-04 |
| 16 | GO:0018026: peptidyl-lysine monomethylation | 3.11E-04 |
| 17 | GO:0010353: response to trehalose | 3.11E-04 |
| 18 | GO:0010033: response to organic substance | 3.11E-04 |
| 19 | GO:0050684: regulation of mRNA processing | 3.11E-04 |
| 20 | GO:0030010: establishment of cell polarity | 3.11E-04 |
| 21 | GO:0051788: response to misfolded protein | 3.11E-04 |
| 22 | GO:0032784: regulation of DNA-templated transcription, elongation | 5.13E-04 |
| 23 | GO:0060968: regulation of gene silencing | 5.13E-04 |
| 24 | GO:0006020: inositol metabolic process | 7.34E-04 |
| 25 | GO:0006646: phosphatidylethanolamine biosynthetic process | 9.73E-04 |
| 26 | GO:0015743: malate transport | 9.73E-04 |
| 27 | GO:0033320: UDP-D-xylose biosynthetic process | 9.73E-04 |
| 28 | GO:0006536: glutamate metabolic process | 9.73E-04 |
| 29 | GO:0010183: pollen tube guidance | 1.08E-03 |
| 30 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.15E-03 |
| 31 | GO:0043097: pyrimidine nucleoside salvage | 1.23E-03 |
| 32 | GO:0098719: sodium ion import across plasma membrane | 1.23E-03 |
| 33 | GO:0005513: detection of calcium ion | 1.23E-03 |
| 34 | GO:0006014: D-ribose metabolic process | 1.51E-03 |
| 35 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.51E-03 |
| 36 | GO:0048827: phyllome development | 1.51E-03 |
| 37 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.51E-03 |
| 38 | GO:0048232: male gamete generation | 1.51E-03 |
| 39 | GO:0043248: proteasome assembly | 1.51E-03 |
| 40 | GO:0042732: D-xylose metabolic process | 1.51E-03 |
| 41 | GO:0006206: pyrimidine nucleobase metabolic process | 1.51E-03 |
| 42 | GO:0045926: negative regulation of growth | 1.81E-03 |
| 43 | GO:0009612: response to mechanical stimulus | 1.81E-03 |
| 44 | GO:0006401: RNA catabolic process | 2.12E-03 |
| 45 | GO:0009610: response to symbiotic fungus | 2.12E-03 |
| 46 | GO:0098869: cellular oxidant detoxification | 2.12E-03 |
| 47 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.12E-03 |
| 48 | GO:0006979: response to oxidative stress | 2.25E-03 |
| 49 | GO:0006499: N-terminal protein myristoylation | 2.35E-03 |
| 50 | GO:0006605: protein targeting | 2.46E-03 |
| 51 | GO:0009415: response to water | 2.46E-03 |
| 52 | GO:0010078: maintenance of root meristem identity | 2.46E-03 |
| 53 | GO:0009819: drought recovery | 2.46E-03 |
| 54 | GO:0009631: cold acclimation | 2.46E-03 |
| 55 | GO:0006491: N-glycan processing | 2.46E-03 |
| 56 | GO:0045087: innate immune response | 2.70E-03 |
| 57 | GO:0016051: carbohydrate biosynthetic process | 2.70E-03 |
| 58 | GO:0006367: transcription initiation from RNA polymerase II promoter | 2.81E-03 |
| 59 | GO:0006972: hyperosmotic response | 2.81E-03 |
| 60 | GO:0006002: fructose 6-phosphate metabolic process | 2.81E-03 |
| 61 | GO:0009880: embryonic pattern specification | 2.81E-03 |
| 62 | GO:0048193: Golgi vesicle transport | 2.81E-03 |
| 63 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 3.17E-03 |
| 64 | GO:0009051: pentose-phosphate shunt, oxidative branch | 3.17E-03 |
| 65 | GO:0042761: very long-chain fatty acid biosynthetic process | 3.55E-03 |
| 66 | GO:0008202: steroid metabolic process | 3.55E-03 |
| 67 | GO:0051453: regulation of intracellular pH | 3.55E-03 |
| 68 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 3.55E-03 |
| 69 | GO:0048829: root cap development | 3.95E-03 |
| 70 | GO:0010015: root morphogenesis | 4.36E-03 |
| 71 | GO:0071365: cellular response to auxin stimulus | 4.79E-03 |
| 72 | GO:0005983: starch catabolic process | 4.79E-03 |
| 73 | GO:0046686: response to cadmium ion | 4.82E-03 |
| 74 | GO:0006006: glucose metabolic process | 5.22E-03 |
| 75 | GO:0010102: lateral root morphogenesis | 5.22E-03 |
| 76 | GO:0007034: vacuolar transport | 5.68E-03 |
| 77 | GO:0048367: shoot system development | 5.68E-03 |
| 78 | GO:0048467: gynoecium development | 5.68E-03 |
| 79 | GO:0006541: glutamine metabolic process | 5.68E-03 |
| 80 | GO:0009933: meristem structural organization | 5.68E-03 |
| 81 | GO:0090351: seedling development | 6.14E-03 |
| 82 | GO:0009225: nucleotide-sugar metabolic process | 6.14E-03 |
| 83 | GO:0005985: sucrose metabolic process | 6.14E-03 |
| 84 | GO:0018105: peptidyl-serine phosphorylation | 6.82E-03 |
| 85 | GO:0048364: root development | 6.94E-03 |
| 86 | GO:0009695: jasmonic acid biosynthetic process | 7.62E-03 |
| 87 | GO:0006825: copper ion transport | 7.62E-03 |
| 88 | GO:0061077: chaperone-mediated protein folding | 8.14E-03 |
| 89 | GO:0009269: response to desiccation | 8.14E-03 |
| 90 | GO:0030433: ubiquitin-dependent ERAD pathway | 8.67E-03 |
| 91 | GO:0035428: hexose transmembrane transport | 8.67E-03 |
| 92 | GO:0009790: embryo development | 9.68E-03 |
| 93 | GO:0006633: fatty acid biosynthetic process | 1.04E-02 |
| 94 | GO:0006413: translational initiation | 1.07E-02 |
| 95 | GO:0000413: protein peptidyl-prolyl isomerization | 1.09E-02 |
| 96 | GO:0010051: xylem and phloem pattern formation | 1.09E-02 |
| 97 | GO:0000226: microtubule cytoskeleton organization | 1.09E-02 |
| 98 | GO:0042391: regulation of membrane potential | 1.09E-02 |
| 99 | GO:0046323: glucose import | 1.15E-02 |
| 100 | GO:0010154: fruit development | 1.15E-02 |
| 101 | GO:0006814: sodium ion transport | 1.21E-02 |
| 102 | GO:0042752: regulation of circadian rhythm | 1.21E-02 |
| 103 | GO:0019252: starch biosynthetic process | 1.27E-02 |
| 104 | GO:0008654: phospholipid biosynthetic process | 1.27E-02 |
| 105 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.28E-02 |
| 106 | GO:0006635: fatty acid beta-oxidation | 1.34E-02 |
| 107 | GO:0071554: cell wall organization or biogenesis | 1.34E-02 |
| 108 | GO:0009409: response to cold | 1.39E-02 |
| 109 | GO:0006914: autophagy | 1.53E-02 |
| 110 | GO:0071805: potassium ion transmembrane transport | 1.60E-02 |
| 111 | GO:0051607: defense response to virus | 1.66E-02 |
| 112 | GO:0006970: response to osmotic stress | 1.92E-02 |
| 113 | GO:0048573: photoperiodism, flowering | 1.95E-02 |
| 114 | GO:0006950: response to stress | 1.95E-02 |
| 115 | GO:0016049: cell growth | 2.02E-02 |
| 116 | GO:0010311: lateral root formation | 2.17E-02 |
| 117 | GO:0006811: ion transport | 2.24E-02 |
| 118 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.28E-02 |
| 119 | GO:0048527: lateral root development | 2.32E-02 |
| 120 | GO:0010119: regulation of stomatal movement | 2.32E-02 |
| 121 | GO:0016192: vesicle-mediated transport | 2.32E-02 |
| 122 | GO:0046777: protein autophosphorylation | 2.36E-02 |
| 123 | GO:0006886: intracellular protein transport | 2.73E-02 |
| 124 | GO:0006897: endocytosis | 2.80E-02 |
| 125 | GO:0009636: response to toxic substance | 3.23E-02 |
| 126 | GO:0009965: leaf morphogenesis | 3.23E-02 |
| 127 | GO:0031347: regulation of defense response | 3.40E-02 |
| 128 | GO:0009736: cytokinin-activated signaling pathway | 3.67E-02 |
| 129 | GO:0006096: glycolytic process | 4.13E-02 |
| 130 | GO:0009626: plant-type hypersensitive response | 4.32E-02 |
| 131 | GO:0015031: protein transport | 4.44E-02 |
| 132 | GO:0016569: covalent chromatin modification | 4.52E-02 |
| 133 | GO:0009624: response to nematode | 4.71E-02 |
| 134 | GO:0009742: brassinosteroid mediated signaling pathway | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051765: inositol tetrakisphosphate kinase activity | 0.00E+00 |
| 2 | GO:0034387: 4-aminobutyrate:pyruvate transaminase activity | 0.00E+00 |
| 3 | GO:0051499: D-aminoacyl-tRNA deacylase activity | 0.00E+00 |
| 4 | GO:1990446: U1 snRNP binding | 0.00E+00 |
| 5 | GO:0051766: inositol trisphosphate kinase activity | 0.00E+00 |
| 6 | GO:0047787: delta4-3-oxosteroid 5beta-reductase activity | 0.00E+00 |
| 7 | GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity | 0.00E+00 |
| 8 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 9.09E-05 |
| 9 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 1.35E-04 |
| 10 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 1.35E-04 |
| 11 | GO:0016274: protein-arginine N-methyltransferase activity | 1.35E-04 |
| 12 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 1.35E-04 |
| 13 | GO:0035671: enone reductase activity | 1.35E-04 |
| 14 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 1.35E-04 |
| 15 | GO:0050521: alpha-glucan, water dikinase activity | 1.35E-04 |
| 16 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 1.35E-04 |
| 17 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.35E-04 |
| 18 | GO:0003867: 4-aminobutyrate transaminase activity | 1.35E-04 |
| 19 | GO:0004609: phosphatidylserine decarboxylase activity | 3.11E-04 |
| 20 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 3.11E-04 |
| 21 | GO:0004839: ubiquitin activating enzyme activity | 3.11E-04 |
| 22 | GO:0004383: guanylate cyclase activity | 5.13E-04 |
| 23 | GO:0005047: signal recognition particle binding | 5.13E-04 |
| 24 | GO:0019829: cation-transporting ATPase activity | 5.13E-04 |
| 25 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 7.34E-04 |
| 26 | GO:0004300: enoyl-CoA hydratase activity | 7.34E-04 |
| 27 | GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity | 7.34E-04 |
| 28 | GO:0001653: peptide receptor activity | 7.34E-04 |
| 29 | GO:0005253: anion channel activity | 9.73E-04 |
| 30 | GO:0016279: protein-lysine N-methyltransferase activity | 9.73E-04 |
| 31 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 9.73E-04 |
| 32 | GO:0008641: small protein activating enzyme activity | 1.23E-03 |
| 33 | GO:0005516: calmodulin binding | 1.32E-03 |
| 34 | GO:0036402: proteasome-activating ATPase activity | 1.51E-03 |
| 35 | GO:0048040: UDP-glucuronate decarboxylase activity | 1.51E-03 |
| 36 | GO:0000293: ferric-chelate reductase activity | 1.51E-03 |
| 37 | GO:0031369: translation initiation factor binding | 1.51E-03 |
| 38 | GO:0004849: uridine kinase activity | 1.81E-03 |
| 39 | GO:0003730: mRNA 3'-UTR binding | 1.81E-03 |
| 40 | GO:0004602: glutathione peroxidase activity | 1.81E-03 |
| 41 | GO:0070403: NAD+ binding | 1.81E-03 |
| 42 | GO:0003950: NAD+ ADP-ribosyltransferase activity | 1.81E-03 |
| 43 | GO:0004747: ribokinase activity | 1.81E-03 |
| 44 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.83E-03 |
| 45 | GO:0005509: calcium ion binding | 1.92E-03 |
| 46 | GO:0004683: calmodulin-dependent protein kinase activity | 1.93E-03 |
| 47 | GO:0003872: 6-phosphofructokinase activity | 2.12E-03 |
| 48 | GO:0015140: malate transmembrane transporter activity | 2.12E-03 |
| 49 | GO:0008865: fructokinase activity | 2.46E-03 |
| 50 | GO:0050897: cobalt ion binding | 2.46E-03 |
| 51 | GO:0005337: nucleoside transmembrane transporter activity | 2.46E-03 |
| 52 | GO:0005524: ATP binding | 2.60E-03 |
| 53 | GO:0005375: copper ion transmembrane transporter activity | 2.81E-03 |
| 54 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 3.55E-03 |
| 55 | GO:0015020: glucuronosyltransferase activity | 3.95E-03 |
| 56 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.04E-03 |
| 57 | GO:0015386: potassium:proton antiporter activity | 4.36E-03 |
| 58 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 5.22E-03 |
| 59 | GO:0017025: TBP-class protein binding | 6.14E-03 |
| 60 | GO:0030552: cAMP binding | 6.14E-03 |
| 61 | GO:0004867: serine-type endopeptidase inhibitor activity | 6.14E-03 |
| 62 | GO:0030553: cGMP binding | 6.14E-03 |
| 63 | GO:0005528: FK506 binding | 7.11E-03 |
| 64 | GO:0005216: ion channel activity | 7.62E-03 |
| 65 | GO:0003727: single-stranded RNA binding | 9.77E-03 |
| 66 | GO:0005249: voltage-gated potassium channel activity | 1.09E-02 |
| 67 | GO:0030551: cyclic nucleotide binding | 1.09E-02 |
| 68 | GO:0016887: ATPase activity | 1.15E-02 |
| 69 | GO:0005355: glucose transmembrane transporter activity | 1.21E-02 |
| 70 | GO:0003743: translation initiation factor activity | 1.34E-02 |
| 71 | GO:0004518: nuclease activity | 1.40E-02 |
| 72 | GO:0015385: sodium:proton antiporter activity | 1.46E-02 |
| 73 | GO:0016413: O-acetyltransferase activity | 1.66E-02 |
| 74 | GO:0008375: acetylglucosaminyltransferase activity | 1.88E-02 |
| 75 | GO:0005507: copper ion binding | 2.13E-02 |
| 76 | GO:0005096: GTPase activator activity | 2.17E-02 |
| 77 | GO:0003697: single-stranded DNA binding | 2.48E-02 |
| 78 | GO:0005525: GTP binding | 2.56E-02 |
| 79 | GO:0050661: NADP binding | 2.72E-02 |
| 80 | GO:0003924: GTPase activity | 3.26E-02 |
| 81 | GO:0004674: protein serine/threonine kinase activity | 3.46E-02 |
| 82 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.67E-02 |
| 83 | GO:0015171: amino acid transmembrane transporter activity | 3.95E-02 |
| 84 | GO:0016746: transferase activity, transferring acyl groups | 4.81E-02 |
| 85 | GO:0005515: protein binding | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071008: U2-type post-mRNA release spliceosomal complex | 0.00E+00 |
| 2 | GO:0005785: signal recognition particle receptor complex | 0.00E+00 |
| 3 | GO:0031981: nuclear lumen | 0.00E+00 |
| 4 | GO:0005783: endoplasmic reticulum | 1.02E-04 |
| 5 | GO:0005829: cytosol | 2.85E-04 |
| 6 | GO:0005794: Golgi apparatus | 7.85E-04 |
| 7 | GO:0005776: autophagosome | 9.73E-04 |
| 8 | GO:0005945: 6-phosphofructokinase complex | 1.23E-03 |
| 9 | GO:0005851: eukaryotic translation initiation factor 2B complex | 1.51E-03 |
| 10 | GO:0031597: cytosolic proteasome complex | 1.81E-03 |
| 11 | GO:0000815: ESCRT III complex | 1.81E-03 |
| 12 | GO:0030173: integral component of Golgi membrane | 1.81E-03 |
| 13 | GO:0016363: nuclear matrix | 1.81E-03 |
| 14 | GO:0031595: nuclear proteasome complex | 2.12E-03 |
| 15 | GO:0005886: plasma membrane | 2.38E-03 |
| 16 | GO:0030131: clathrin adaptor complex | 2.46E-03 |
| 17 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.81E-03 |
| 18 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.55E-03 |
| 19 | GO:0030125: clathrin vesicle coat | 3.95E-03 |
| 20 | GO:0005665: DNA-directed RNA polymerase II, core complex | 4.79E-03 |
| 21 | GO:0010008: endosome membrane | 5.68E-03 |
| 22 | GO:0005795: Golgi stack | 6.14E-03 |
| 23 | GO:0005768: endosome | 7.50E-03 |
| 24 | GO:0005905: clathrin-coated pit | 8.14E-03 |
| 25 | GO:0031410: cytoplasmic vesicle | 8.67E-03 |
| 26 | GO:0009705: plant-type vacuole membrane | 1.15E-02 |
| 27 | GO:0032580: Golgi cisterna membrane | 1.53E-02 |
| 28 | GO:0000932: P-body | 1.73E-02 |
| 29 | GO:0016021: integral component of membrane | 1.89E-02 |
| 30 | GO:0000786: nucleosome | 2.40E-02 |
| 31 | GO:0031902: late endosome membrane | 2.80E-02 |
| 32 | GO:0005622: intracellular | 2.81E-02 |
| 33 | GO:0090406: pollen tube | 2.97E-02 |
| 34 | GO:0031966: mitochondrial membrane | 3.49E-02 |
| 35 | GO:0000502: proteasome complex | 3.67E-02 |
| 36 | GO:0005737: cytoplasm | 3.97E-02 |
| 37 | GO:0000139: Golgi membrane | 4.80E-02 |