GO Enrichment Analysis of Co-expressed Genes with
AT1G61640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000162: tryptophan biosynthetic process | 6.64E-07 |
| 2 | GO:0009617: response to bacterium | 1.13E-05 |
| 3 | GO:0009700: indole phytoalexin biosynthetic process | 3.37E-05 |
| 4 | GO:0043687: post-translational protein modification | 3.37E-05 |
| 5 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 8.48E-05 |
| 6 | GO:0048826: cotyledon morphogenesis | 8.48E-05 |
| 7 | GO:0042256: mature ribosome assembly | 1.47E-04 |
| 8 | GO:0010338: leaf formation | 1.47E-04 |
| 9 | GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity | 1.47E-04 |
| 10 | GO:1902626: assembly of large subunit precursor of preribosome | 1.47E-04 |
| 11 | GO:0009851: auxin biosynthetic process | 1.78E-04 |
| 12 | GO:0010600: regulation of auxin biosynthetic process | 2.95E-04 |
| 13 | GO:0000460: maturation of 5.8S rRNA | 2.95E-04 |
| 14 | GO:0006564: L-serine biosynthetic process | 3.77E-04 |
| 15 | GO:0018279: protein N-linked glycosylation via asparagine | 3.77E-04 |
| 16 | GO:0000470: maturation of LSU-rRNA | 4.63E-04 |
| 17 | GO:0010358: leaf shaping | 4.63E-04 |
| 18 | GO:0047484: regulation of response to osmotic stress | 4.63E-04 |
| 19 | GO:0006099: tricarboxylic acid cycle | 4.83E-04 |
| 20 | GO:0009648: photoperiodism | 5.53E-04 |
| 21 | GO:0000054: ribosomal subunit export from nucleus | 5.53E-04 |
| 22 | GO:0042773: ATP synthesis coupled electron transport | 6.47E-04 |
| 23 | GO:0006102: isocitrate metabolic process | 7.44E-04 |
| 24 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 7.44E-04 |
| 25 | GO:0006526: arginine biosynthetic process | 8.45E-04 |
| 26 | GO:0010120: camalexin biosynthetic process | 8.45E-04 |
| 27 | GO:0010112: regulation of systemic acquired resistance | 9.49E-04 |
| 28 | GO:0009688: abscisic acid biosynthetic process | 1.17E-03 |
| 29 | GO:0006415: translational termination | 1.28E-03 |
| 30 | GO:0010582: floral meristem determinacy | 1.40E-03 |
| 31 | GO:0010229: inflorescence development | 1.52E-03 |
| 32 | GO:0009790: embryo development | 1.58E-03 |
| 33 | GO:0006541: glutamine metabolic process | 1.65E-03 |
| 34 | GO:0080147: root hair cell development | 2.05E-03 |
| 35 | GO:0016226: iron-sulfur cluster assembly | 2.48E-03 |
| 36 | GO:0009625: response to insect | 2.63E-03 |
| 37 | GO:0006012: galactose metabolic process | 2.63E-03 |
| 38 | GO:0071215: cellular response to abscisic acid stimulus | 2.63E-03 |
| 39 | GO:0010051: xylem and phloem pattern formation | 3.09E-03 |
| 40 | GO:0006885: regulation of pH | 3.25E-03 |
| 41 | GO:0048825: cotyledon development | 3.59E-03 |
| 42 | GO:0000302: response to reactive oxygen species | 3.76E-03 |
| 43 | GO:0009630: gravitropism | 3.93E-03 |
| 44 | GO:0010583: response to cyclopentenone | 3.93E-03 |
| 45 | GO:0010252: auxin homeostasis | 4.28E-03 |
| 46 | GO:0048481: plant ovule development | 5.79E-03 |
| 47 | GO:0010311: lateral root formation | 5.99E-03 |
| 48 | GO:0010043: response to zinc ion | 6.40E-03 |
| 49 | GO:0009853: photorespiration | 6.82E-03 |
| 50 | GO:0009926: auxin polar transport | 8.14E-03 |
| 51 | GO:0009640: photomorphogenesis | 8.14E-03 |
| 52 | GO:0009793: embryo development ending in seed dormancy | 9.31E-03 |
| 53 | GO:0006812: cation transport | 9.54E-03 |
| 54 | GO:0009846: pollen germination | 9.54E-03 |
| 55 | GO:0006364: rRNA processing | 1.00E-02 |
| 56 | GO:0006813: potassium ion transport | 1.00E-02 |
| 57 | GO:0055114: oxidation-reduction process | 1.12E-02 |
| 58 | GO:0048367: shoot system development | 1.15E-02 |
| 59 | GO:0000398: mRNA splicing, via spliceosome | 1.42E-02 |
| 60 | GO:0006413: translational initiation | 1.80E-02 |
| 61 | GO:0040008: regulation of growth | 1.83E-02 |
| 62 | GO:0010150: leaf senescence | 1.89E-02 |
| 63 | GO:0009451: RNA modification | 1.92E-02 |
| 64 | GO:0009723: response to ethylene | 2.87E-02 |
| 65 | GO:0048366: leaf development | 2.90E-02 |
| 66 | GO:0046686: response to cadmium ion | 2.91E-02 |
| 67 | GO:0080167: response to karrikin | 3.01E-02 |
| 68 | GO:0046777: protein autophosphorylation | 3.16E-02 |
| 69 | GO:0016042: lipid catabolic process | 3.89E-02 |
| 70 | GO:0009737: response to abscisic acid | 3.97E-02 |
| 71 | GO:0048364: root development | 4.10E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010298: dihydrocamalexic acid decarboxylase activity | 0.00E+00 |
| 2 | GO:0004049: anthranilate synthase activity | 2.98E-07 |
| 3 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 3.37E-05 |
| 4 | GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 3.37E-05 |
| 5 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 3.37E-05 |
| 6 | GO:0051536: iron-sulfur cluster binding | 7.06E-05 |
| 7 | GO:0004042: acetyl-CoA:L-glutamate N-acetyltransferase activity | 8.48E-05 |
| 8 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 2.18E-04 |
| 9 | GO:0043023: ribosomal large subunit binding | 2.18E-04 |
| 10 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 2.18E-04 |
| 11 | GO:0016149: translation release factor activity, codon specific | 2.18E-04 |
| 12 | GO:0004576: oligosaccharyl transferase activity | 2.95E-04 |
| 13 | GO:0004031: aldehyde oxidase activity | 2.95E-04 |
| 14 | GO:0050302: indole-3-acetaldehyde oxidase activity | 2.95E-04 |
| 15 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.77E-04 |
| 16 | GO:0051539: 4 iron, 4 sulfur cluster binding | 5.25E-04 |
| 17 | GO:0004656: procollagen-proline 4-dioxygenase activity | 5.53E-04 |
| 18 | GO:0051537: 2 iron, 2 sulfur cluster binding | 6.38E-04 |
| 19 | GO:0004034: aldose 1-epimerase activity | 7.44E-04 |
| 20 | GO:0043022: ribosome binding | 7.44E-04 |
| 21 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 7.87E-04 |
| 22 | GO:0003747: translation release factor activity | 9.49E-04 |
| 23 | GO:0016746: transferase activity, transferring acyl groups | 1.13E-03 |
| 24 | GO:0001054: RNA polymerase I activity | 1.28E-03 |
| 25 | GO:0010329: auxin efflux transmembrane transporter activity | 1.52E-03 |
| 26 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.52E-03 |
| 27 | GO:0031418: L-ascorbic acid binding | 2.05E-03 |
| 28 | GO:0003954: NADH dehydrogenase activity | 2.05E-03 |
| 29 | GO:0005451: monovalent cation:proton antiporter activity | 3.09E-03 |
| 30 | GO:0005506: iron ion binding | 3.15E-03 |
| 31 | GO:0001085: RNA polymerase II transcription factor binding | 3.25E-03 |
| 32 | GO:0050660: flavin adenine dinucleotide binding | 3.29E-03 |
| 33 | GO:0016853: isomerase activity | 3.42E-03 |
| 34 | GO:0015299: solute:proton antiporter activity | 3.42E-03 |
| 35 | GO:0010181: FMN binding | 3.42E-03 |
| 36 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 3.76E-03 |
| 37 | GO:0015385: sodium:proton antiporter activity | 4.10E-03 |
| 38 | GO:0009055: electron carrier activity | 5.56E-03 |
| 39 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 6.40E-03 |
| 40 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 6.40E-03 |
| 41 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 6.82E-03 |
| 42 | GO:0000166: nucleotide binding | 9.19E-03 |
| 43 | GO:0045735: nutrient reservoir activity | 1.13E-02 |
| 44 | GO:0030246: carbohydrate binding | 1.24E-02 |
| 45 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.65E-02 |
| 46 | GO:0003743: translation initiation factor activity | 2.11E-02 |
| 47 | GO:0016491: oxidoreductase activity | 2.46E-02 |
| 48 | GO:0003682: chromatin binding | 2.69E-02 |
| 49 | GO:0003729: mRNA binding | 2.78E-02 |
| 50 | GO:0008233: peptidase activity | 2.97E-02 |
| 51 | GO:0004497: monooxygenase activity | 3.01E-02 |
| 52 | GO:0042803: protein homodimerization activity | 3.54E-02 |
| 53 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.62E-02 |
| 54 | GO:0004519: endonuclease activity | 4.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045252: oxoglutarate dehydrogenase complex | 3.37E-05 |
| 2 | GO:0009925: basal plasma membrane | 8.48E-05 |
| 3 | GO:0005950: anthranilate synthase complex | 8.48E-05 |
| 4 | GO:0045177: apical part of cell | 2.18E-04 |
| 5 | GO:0008250: oligosaccharyltransferase complex | 3.77E-04 |
| 6 | GO:0005783: endoplasmic reticulum | 6.13E-04 |
| 7 | GO:0030687: preribosome, large subunit precursor | 6.47E-04 |
| 8 | GO:0005736: DNA-directed RNA polymerase I complex | 9.49E-04 |
| 9 | GO:0005829: cytosol | 1.87E-03 |
| 10 | GO:0045271: respiratory chain complex I | 2.19E-03 |
| 11 | GO:0009536: plastid | 4.16E-03 |
| 12 | GO:0016020: membrane | 4.26E-03 |
| 13 | GO:0009505: plant-type cell wall | 4.28E-03 |
| 14 | GO:0005667: transcription factor complex | 5.21E-03 |
| 15 | GO:0009570: chloroplast stroma | 9.13E-03 |
| 16 | GO:0031966: mitochondrial membrane | 9.54E-03 |
| 17 | GO:0005747: mitochondrial respiratory chain complex I | 1.15E-02 |
| 18 | GO:0046658: anchored component of plasma membrane | 2.31E-02 |
| 19 | GO:0022627: cytosolic small ribosomal subunit | 2.31E-02 |
| 20 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.76E-02 |
| 21 | GO:0031969: chloroplast membrane | 3.01E-02 |
| 22 | GO:0005730: nucleolus | 3.16E-02 |
| 23 | GO:0043231: intracellular membrane-bounded organelle | 4.26E-02 |