GO Enrichment Analysis of Co-expressed Genes with
AT1G61520
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030644: cellular chloride ion homeostasis | 0.00E+00 |
| 2 | GO:0015717: triose phosphate transport | 0.00E+00 |
| 3 | GO:1903508: positive regulation of nucleic acid-templated transcription | 0.00E+00 |
| 4 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
| 5 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.11E-20 |
| 6 | GO:0015979: photosynthesis | 5.40E-14 |
| 7 | GO:0018298: protein-chromophore linkage | 9.20E-13 |
| 8 | GO:0010114: response to red light | 2.09E-08 |
| 9 | GO:0010218: response to far red light | 2.78E-07 |
| 10 | GO:0009769: photosynthesis, light harvesting in photosystem II | 5.66E-07 |
| 11 | GO:0009645: response to low light intensity stimulus | 5.66E-07 |
| 12 | GO:0009644: response to high light intensity | 1.00E-06 |
| 13 | GO:0009416: response to light stimulus | 9.62E-06 |
| 14 | GO:0009637: response to blue light | 1.33E-05 |
| 15 | GO:0010196: nonphotochemical quenching | 6.07E-05 |
| 16 | GO:0015812: gamma-aminobutyric acid transport | 1.23E-04 |
| 17 | GO:0015995: chlorophyll biosynthetic process | 1.47E-04 |
| 18 | GO:0007623: circadian rhythm | 2.06E-04 |
| 19 | GO:0051170: nuclear import | 2.86E-04 |
| 20 | GO:0035304: regulation of protein dephosphorylation | 2.86E-04 |
| 21 | GO:1902884: positive regulation of response to oxidative stress | 2.86E-04 |
| 22 | GO:0006883: cellular sodium ion homeostasis | 2.86E-04 |
| 23 | GO:0010207: photosystem II assembly | 3.07E-04 |
| 24 | GO:1902448: positive regulation of shade avoidance | 4.72E-04 |
| 25 | GO:0006598: polyamine catabolic process | 4.72E-04 |
| 26 | GO:1901562: response to paraquat | 4.72E-04 |
| 27 | GO:0035436: triose phosphate transmembrane transport | 4.72E-04 |
| 28 | GO:0048511: rhythmic process | 5.17E-04 |
| 29 | GO:0010017: red or far-red light signaling pathway | 5.65E-04 |
| 30 | GO:0080167: response to karrikin | 5.82E-04 |
| 31 | GO:0044211: CTP salvage | 6.76E-04 |
| 32 | GO:0031936: negative regulation of chromatin silencing | 6.76E-04 |
| 33 | GO:0009409: response to cold | 7.67E-04 |
| 34 | GO:0009765: photosynthesis, light harvesting | 8.97E-04 |
| 35 | GO:2000306: positive regulation of photomorphogenesis | 8.97E-04 |
| 36 | GO:0010600: regulation of auxin biosynthetic process | 8.97E-04 |
| 37 | GO:0015713: phosphoglycerate transport | 8.97E-04 |
| 38 | GO:0044206: UMP salvage | 8.97E-04 |
| 39 | GO:1901002: positive regulation of response to salt stress | 8.97E-04 |
| 40 | GO:0030104: water homeostasis | 8.97E-04 |
| 41 | GO:0043097: pyrimidine nucleoside salvage | 1.13E-03 |
| 42 | GO:0016123: xanthophyll biosynthetic process | 1.13E-03 |
| 43 | GO:1901657: glycosyl compound metabolic process | 1.15E-03 |
| 44 | GO:0045962: positive regulation of development, heterochronic | 1.39E-03 |
| 45 | GO:0006206: pyrimidine nucleobase metabolic process | 1.39E-03 |
| 46 | GO:0009635: response to herbicide | 1.39E-03 |
| 47 | GO:0009643: photosynthetic acclimation | 1.39E-03 |
| 48 | GO:0042549: photosystem II stabilization | 1.39E-03 |
| 49 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.66E-03 |
| 50 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.66E-03 |
| 51 | GO:1900056: negative regulation of leaf senescence | 1.95E-03 |
| 52 | GO:0080111: DNA demethylation | 1.95E-03 |
| 53 | GO:0010161: red light signaling pathway | 1.95E-03 |
| 54 | GO:0000160: phosphorelay signal transduction system | 1.98E-03 |
| 55 | GO:0010928: regulation of auxin mediated signaling pathway | 2.26E-03 |
| 56 | GO:0042255: ribosome assembly | 2.26E-03 |
| 57 | GO:0010078: maintenance of root meristem identity | 2.26E-03 |
| 58 | GO:0009704: de-etiolation | 2.26E-03 |
| 59 | GO:0010099: regulation of photomorphogenesis | 2.58E-03 |
| 60 | GO:0009658: chloroplast organization | 2.60E-03 |
| 61 | GO:0010206: photosystem II repair | 2.91E-03 |
| 62 | GO:0090333: regulation of stomatal closure | 2.91E-03 |
| 63 | GO:0009640: photomorphogenesis | 3.06E-03 |
| 64 | GO:0010205: photoinhibition | 3.26E-03 |
| 65 | GO:0030042: actin filament depolymerization | 3.26E-03 |
| 66 | GO:0010018: far-red light signaling pathway | 3.26E-03 |
| 67 | GO:0010380: regulation of chlorophyll biosynthetic process | 3.26E-03 |
| 68 | GO:0010162: seed dormancy process | 3.62E-03 |
| 69 | GO:0009688: abscisic acid biosynthetic process | 3.62E-03 |
| 70 | GO:0009641: shade avoidance | 3.62E-03 |
| 71 | GO:0006351: transcription, DNA-templated | 3.68E-03 |
| 72 | GO:0044550: secondary metabolite biosynthetic process | 3.80E-03 |
| 73 | GO:0042538: hyperosmotic salinity response | 3.83E-03 |
| 74 | GO:0019684: photosynthesis, light reaction | 4.00E-03 |
| 75 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.00E-03 |
| 76 | GO:0046856: phosphatidylinositol dephosphorylation | 4.00E-03 |
| 77 | GO:0009585: red, far-red light phototransduction | 4.11E-03 |
| 78 | GO:0050826: response to freezing | 4.79E-03 |
| 79 | GO:0018107: peptidyl-threonine phosphorylation | 4.79E-03 |
| 80 | GO:0009718: anthocyanin-containing compound biosynthetic process | 4.79E-03 |
| 81 | GO:0009767: photosynthetic electron transport chain | 4.79E-03 |
| 82 | GO:0007015: actin filament organization | 5.20E-03 |
| 83 | GO:0009266: response to temperature stimulus | 5.20E-03 |
| 84 | GO:0090351: seedling development | 5.63E-03 |
| 85 | GO:0042753: positive regulation of circadian rhythm | 6.06E-03 |
| 86 | GO:0055114: oxidation-reduction process | 6.40E-03 |
| 87 | GO:0009737: response to abscisic acid | 6.65E-03 |
| 88 | GO:0006355: regulation of transcription, DNA-templated | 7.03E-03 |
| 89 | GO:0009269: response to desiccation | 7.45E-03 |
| 90 | GO:0003333: amino acid transmembrane transport | 7.45E-03 |
| 91 | GO:0010431: seed maturation | 7.45E-03 |
| 92 | GO:0071215: cellular response to abscisic acid stimulus | 8.43E-03 |
| 93 | GO:0045492: xylan biosynthetic process | 8.93E-03 |
| 94 | GO:0009735: response to cytokinin | 1.04E-02 |
| 95 | GO:0010182: sugar mediated signaling pathway | 1.05E-02 |
| 96 | GO:0006814: sodium ion transport | 1.11E-02 |
| 97 | GO:0032502: developmental process | 1.28E-02 |
| 98 | GO:0009639: response to red or far red light | 1.40E-02 |
| 99 | GO:0010286: heat acclimation | 1.46E-02 |
| 100 | GO:0009651: response to salt stress | 1.46E-02 |
| 101 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.65E-02 |
| 102 | GO:0006970: response to osmotic stress | 1.69E-02 |
| 103 | GO:0048573: photoperiodism, flowering | 1.78E-02 |
| 104 | GO:0009723: response to ethylene | 1.81E-02 |
| 105 | GO:0016311: dephosphorylation | 1.85E-02 |
| 106 | GO:0048481: plant ovule development | 1.91E-02 |
| 107 | GO:0009631: cold acclimation | 2.12E-02 |
| 108 | GO:0010119: regulation of stomatal movement | 2.12E-02 |
| 109 | GO:0007568: aging | 2.12E-02 |
| 110 | GO:0009910: negative regulation of flower development | 2.12E-02 |
| 111 | GO:0016051: carbohydrate biosynthetic process | 2.26E-02 |
| 112 | GO:0045892: negative regulation of transcription, DNA-templated | 2.36E-02 |
| 113 | GO:0006839: mitochondrial transport | 2.48E-02 |
| 114 | GO:0051707: response to other organism | 2.71E-02 |
| 115 | GO:0009414: response to water deprivation | 2.74E-02 |
| 116 | GO:0008643: carbohydrate transport | 2.87E-02 |
| 117 | GO:0006629: lipid metabolic process | 2.87E-02 |
| 118 | GO:0009408: response to heat | 2.87E-02 |
| 119 | GO:0009965: leaf morphogenesis | 2.95E-02 |
| 120 | GO:0006812: cation transport | 3.19E-02 |
| 121 | GO:0009909: regulation of flower development | 3.60E-02 |
| 122 | GO:0043086: negative regulation of catalytic activity | 3.78E-02 |
| 123 | GO:0009624: response to nematode | 4.31E-02 |
| 124 | GO:0018105: peptidyl-serine phosphorylation | 4.40E-02 |
| 125 | GO:0006810: transport | 4.53E-02 |
| 126 | GO:0005975: carbohydrate metabolic process | 4.72E-02 |
| 127 | GO:0046686: response to cadmium ion | 4.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0004567: beta-mannosidase activity | 0.00E+00 |
| 3 | GO:0080082: esculin beta-glucosidase activity | 0.00E+00 |
| 4 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 5 | GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity | 0.00E+00 |
| 6 | GO:0047668: amygdalin beta-glucosidase activity | 0.00E+00 |
| 7 | GO:0019912: cyclin-dependent protein kinase activating kinase activity | 0.00E+00 |
| 8 | GO:0080083: beta-gentiobiose beta-glucosidase activity | 0.00E+00 |
| 9 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 10 | GO:0031409: pigment binding | 1.68E-18 |
| 11 | GO:0016168: chlorophyll binding | 3.75E-15 |
| 12 | GO:0080079: cellobiose glucosidase activity | 1.23E-04 |
| 13 | GO:0010242: oxygen evolving activity | 1.23E-04 |
| 14 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.23E-04 |
| 15 | GO:0015185: gamma-aminobutyric acid transmembrane transporter activity | 1.23E-04 |
| 16 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 1.23E-04 |
| 17 | GO:0015297: antiporter activity | 1.90E-04 |
| 18 | GO:0005515: protein binding | 2.29E-04 |
| 19 | GO:0016630: protochlorophyllide reductase activity | 2.86E-04 |
| 20 | GO:0015180: L-alanine transmembrane transporter activity | 2.86E-04 |
| 21 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 4.72E-04 |
| 22 | GO:0071917: triose-phosphate transmembrane transporter activity | 4.72E-04 |
| 23 | GO:0046592: polyamine oxidase activity | 4.72E-04 |
| 24 | GO:0015181: arginine transmembrane transporter activity | 6.76E-04 |
| 25 | GO:0015189: L-lysine transmembrane transporter activity | 6.76E-04 |
| 26 | GO:0046872: metal ion binding | 8.59E-04 |
| 27 | GO:0005313: L-glutamate transmembrane transporter activity | 8.97E-04 |
| 28 | GO:0015120: phosphoglycerate transmembrane transporter activity | 8.97E-04 |
| 29 | GO:0004845: uracil phosphoribosyltransferase activity | 8.97E-04 |
| 30 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.04E-03 |
| 31 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 1.13E-03 |
| 32 | GO:0000156: phosphorelay response regulator activity | 1.15E-03 |
| 33 | GO:0004849: uridine kinase activity | 1.66E-03 |
| 34 | GO:0004602: glutathione peroxidase activity | 1.66E-03 |
| 35 | GO:0102483: scopolin beta-glucosidase activity | 1.70E-03 |
| 36 | GO:0003993: acid phosphatase activity | 2.49E-03 |
| 37 | GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity | 2.58E-03 |
| 38 | GO:0008422: beta-glucosidase activity | 2.60E-03 |
| 39 | GO:0071949: FAD binding | 2.91E-03 |
| 40 | GO:0000989: transcription factor activity, transcription factor binding | 2.91E-03 |
| 41 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.30E-03 |
| 42 | GO:0047372: acylglycerol lipase activity | 4.00E-03 |
| 43 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 4.39E-03 |
| 44 | GO:0004022: alcohol dehydrogenase (NAD) activity | 4.79E-03 |
| 45 | GO:0005315: inorganic phosphate transmembrane transporter activity | 4.79E-03 |
| 46 | GO:0008266: poly(U) RNA binding | 5.20E-03 |
| 47 | GO:0008131: primary amine oxidase activity | 5.20E-03 |
| 48 | GO:0003712: transcription cofactor activity | 5.63E-03 |
| 49 | GO:0005506: iron ion binding | 7.08E-03 |
| 50 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 7.32E-03 |
| 51 | GO:0003727: single-stranded RNA binding | 8.93E-03 |
| 52 | GO:0008514: organic anion transmembrane transporter activity | 8.93E-03 |
| 53 | GO:0048038: quinone binding | 1.22E-02 |
| 54 | GO:0008375: acetylglucosaminyltransferase activity | 1.71E-02 |
| 55 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.85E-02 |
| 56 | GO:0004497: monooxygenase activity | 1.94E-02 |
| 57 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.05E-02 |
| 58 | GO:0016787: hydrolase activity | 2.28E-02 |
| 59 | GO:0003677: DNA binding | 2.41E-02 |
| 60 | GO:0042393: histone binding | 2.48E-02 |
| 61 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.51E-02 |
| 62 | GO:0005198: structural molecule activity | 2.95E-02 |
| 63 | GO:0015293: symporter activity | 2.95E-02 |
| 64 | GO:0005215: transporter activity | 3.20E-02 |
| 65 | GO:0015171: amino acid transmembrane transporter activity | 3.60E-02 |
| 66 | GO:0045735: nutrient reservoir activity | 3.78E-02 |
| 67 | GO:0022857: transmembrane transporter activity | 4.13E-02 |
| 68 | GO:0016874: ligase activity | 4.13E-02 |
| 69 | GO:0003779: actin binding | 4.22E-02 |
| 70 | GO:0015035: protein disulfide oxidoreductase activity | 4.40E-02 |
| 71 | GO:0008270: zinc ion binding | 4.42E-02 |
| 72 | GO:0020037: heme binding | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009783: photosystem II antenna complex | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 9.09E-19 |
| 3 | GO:0009534: chloroplast thylakoid | 2.22E-18 |
| 4 | GO:0010287: plastoglobule | 4.23E-17 |
| 5 | GO:0009579: thylakoid | 6.05E-17 |
| 6 | GO:0009522: photosystem I | 2.03E-16 |
| 7 | GO:0009941: chloroplast envelope | 1.68E-14 |
| 8 | GO:0030076: light-harvesting complex | 5.32E-14 |
| 9 | GO:0009523: photosystem II | 2.92E-08 |
| 10 | GO:0042651: thylakoid membrane | 3.09E-07 |
| 11 | GO:0009507: chloroplast | 5.31E-07 |
| 12 | GO:0009517: PSII associated light-harvesting complex II | 1.29E-05 |
| 13 | GO:0016021: integral component of membrane | 2.08E-05 |
| 14 | GO:0016020: membrane | 2.88E-05 |
| 15 | GO:0009538: photosystem I reaction center | 7.88E-05 |
| 16 | GO:0009543: chloroplast thylakoid lumen | 1.18E-04 |
| 17 | GO:0031977: thylakoid lumen | 2.99E-04 |
| 18 | GO:0030095: chloroplast photosystem II | 3.07E-04 |
| 19 | GO:0009654: photosystem II oxygen evolving complex | 4.71E-04 |
| 20 | GO:0009898: cytoplasmic side of plasma membrane | 8.97E-04 |
| 21 | GO:0032586: protein storage vacuole membrane | 8.97E-04 |
| 22 | GO:0019898: extrinsic component of membrane | 9.56E-04 |
| 23 | GO:0055035: plastid thylakoid membrane | 1.13E-03 |
| 24 | GO:0009533: chloroplast stromal thylakoid | 1.95E-03 |
| 25 | GO:0000326: protein storage vacuole | 2.58E-03 |
| 26 | GO:0010494: cytoplasmic stress granule | 2.91E-03 |
| 27 | GO:0031969: chloroplast membrane | 3.41E-03 |
| 28 | GO:0015629: actin cytoskeleton | 8.43E-03 |
| 29 | GO:0000932: P-body | 1.58E-02 |
| 30 | GO:0009707: chloroplast outer membrane | 1.91E-02 |
| 31 | GO:0031966: mitochondrial membrane | 3.19E-02 |
| 32 | GO:0016607: nuclear speck | 3.86E-02 |
| 33 | GO:0009706: chloroplast inner membrane | 4.31E-02 |
| 34 | GO:0009570: chloroplast stroma | 4.48E-02 |