co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G61380

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
2	GO:0006105: succinate metabolic process	0.00E+00
3	GO:0019484: beta-alanine catabolic process	0.00E+00
4	GO:0008202: steroid metabolic process	4.74E-05
5	GO:0009865: pollen tube adhesion	5.79E-05
6	GO:0006540: glutamate decarboxylation to succinate	5.79E-05
7	GO:0035494: SNARE complex disassembly	5.79E-05
8	GO:0046167: glycerol-3-phosphate biosynthetic process	5.79E-05
9	GO:0035266: meristem growth	5.79E-05
10	GO:0009450: gamma-aminobutyric acid catabolic process	5.79E-05
11	GO:0007292: female gamete generation	5.79E-05
12	GO:0030187: melatonin biosynthetic process	1.41E-04
13	GO:1902000: homogentisate catabolic process	1.41E-04
14	GO:0019441: tryptophan catabolic process to kynurenine	1.41E-04
15	GO:0009308: amine metabolic process	1.41E-04
16	GO:0010033: response to organic substance	1.41E-04
17	GO:0006641: triglyceride metabolic process	1.41E-04
18	GO:0051788: response to misfolded protein	1.41E-04
19	GO:0009072: aromatic amino acid family metabolic process	2.40E-04
20	GO:0060968: regulation of gene silencing	2.40E-04
21	GO:0042344: indole glucosinolate catabolic process	2.40E-04
22	GO:0019563: glycerol catabolic process	2.40E-04
23	GO:0006572: tyrosine catabolic process	3.49E-04
24	GO:0006624: vacuolar protein processing	3.49E-04
25	GO:0006020: inositol metabolic process	3.49E-04
26	GO:0072334: UDP-galactose transmembrane transport	3.49E-04
27	GO:0006072: glycerol-3-phosphate metabolic process	3.49E-04
28	GO:0006809: nitric oxide biosynthetic process	3.49E-04
29	GO:0009399: nitrogen fixation	3.49E-04
30	GO:0010188: response to microbial phytotoxin	4.66E-04
31	GO:0006542: glutamine biosynthetic process	4.66E-04
32	GO:0010222: stem vascular tissue pattern formation	4.66E-04
33	GO:0006536: glutamate metabolic process	4.66E-04
34	GO:0000290: deadenylation-dependent decapping of nuclear-transcribed mRNA	5.92E-04
35	GO:0006014: D-ribose metabolic process	7.24E-04
36	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	7.24E-04
37	GO:0048827: phyllome development	7.24E-04
38	GO:0016070: RNA metabolic process	7.24E-04
39	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	7.24E-04
40	GO:0048232: male gamete generation	7.24E-04
41	GO:0043248: proteasome assembly	7.24E-04
42	GO:0006694: steroid biosynthetic process	8.63E-04
43	GO:0031930: mitochondria-nucleus signaling pathway	8.63E-04
44	GO:0045087: innate immune response	8.97E-04
45	GO:0006333: chromatin assembly or disassembly	1.01E-03
46	GO:0010044: response to aluminum ion	1.01E-03
47	GO:0071669: plant-type cell wall organization or biogenesis	1.01E-03
48	GO:0010078: maintenance of root meristem identity	1.16E-03
49	GO:0006644: phospholipid metabolic process	1.16E-03
50	GO:0006491: N-glycan processing	1.16E-03
51	GO:0048364: root development	1.63E-03
52	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.65E-03
53	GO:0048829: root cap development	1.83E-03
54	GO:0009641: shade avoidance	1.83E-03
55	GO:0051555: flavonol biosynthetic process	1.83E-03
56	GO:0048367: shoot system development	1.85E-03
57	GO:0010015: root morphogenesis	2.02E-03
58	GO:0009682: induced systemic resistance	2.02E-03
59	GO:0052544: defense response by callose deposition in cell wall	2.02E-03
60	GO:0043085: positive regulation of catalytic activity	2.02E-03
61	GO:0006541: glutamine metabolic process	2.62E-03
62	GO:0002237: response to molecule of bacterial origin	2.62E-03
63	GO:0009933: meristem structural organization	2.62E-03
64	GO:0090351: seedling development	2.82E-03
65	GO:0009225: nucleotide-sugar metabolic process	2.82E-03
66	GO:0010167: response to nitrate	2.82E-03
67	GO:0005985: sucrose metabolic process	2.82E-03
68	GO:0045333: cellular respiration	3.26E-03
69	GO:0003333: amino acid transmembrane transport	3.72E-03
70	GO:0030433: ubiquitin-dependent ERAD pathway	3.95E-03
71	GO:0071215: cellular response to abscisic acid stimulus	4.20E-03
72	GO:0009617: response to bacterium	4.38E-03
73	GO:0000271: polysaccharide biosynthetic process	4.95E-03
74	GO:0010051: xylem and phloem pattern formation	4.95E-03
75	GO:0042631: cellular response to water deprivation	4.95E-03
76	GO:0010154: fruit development	5.21E-03
77	GO:0061025: membrane fusion	5.48E-03
78	GO:0009749: response to glucose	5.75E-03
79	GO:0019252: starch biosynthetic process	5.75E-03
80	GO:0008654: phospholipid biosynthetic process	5.75E-03
81	GO:0010183: pollen tube guidance	5.75E-03
82	GO:0006635: fatty acid beta-oxidation	6.02E-03
83	GO:0019760: glucosinolate metabolic process	6.88E-03
84	GO:0080167: response to karrikin	7.02E-03
85	GO:0006904: vesicle docking involved in exocytosis	7.18E-03
86	GO:0016126: sterol biosynthetic process	7.78E-03
87	GO:0042742: defense response to bacterium	7.80E-03
88	GO:0042128: nitrate assimilation	8.40E-03
89	GO:0048573: photoperiodism, flowering	8.71E-03
90	GO:0006950: response to stress	8.71E-03
91	GO:0030244: cellulose biosynthetic process	9.36E-03
92	GO:0008219: cell death	9.36E-03
93	GO:0009817: defense response to fungus, incompatible interaction	9.36E-03
94	GO:0009832: plant-type cell wall biogenesis	9.69E-03
95	GO:0048767: root hair elongation	9.69E-03
96	GO:0010311: lateral root formation	9.69E-03
97	GO:0006499: N-terminal protein myristoylation	1.00E-02
98	GO:0009631: cold acclimation	1.04E-02
99	GO:0009926: auxin polar transport	1.32E-02
100	GO:0009640: photomorphogenesis	1.32E-02
101	GO:0005975: carbohydrate metabolic process	1.33E-02
102	GO:0046686: response to cadmium ion	1.37E-02
103	GO:0009965: leaf morphogenesis	1.44E-02
104	GO:0000165: MAPK cascade	1.51E-02
105	GO:0031347: regulation of defense response	1.51E-02
106	GO:0042538: hyperosmotic salinity response	1.55E-02
107	GO:0009809: lignin biosynthetic process	1.63E-02
108	GO:0051603: proteolysis involved in cellular protein catabolic process	1.67E-02
109	GO:0055114: oxidation-reduction process	1.71E-02
110	GO:0009611: response to wounding	1.89E-02
111	GO:0009626: plant-type hypersensitive response	1.92E-02
112	GO:0035556: intracellular signal transduction	1.95E-02
113	GO:0010150: leaf senescence	3.09E-02
114	GO:0006508: proteolysis	3.21E-02
115	GO:0006468: protein phosphorylation	3.34E-02
116	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.35E-02
117	GO:0007166: cell surface receptor signaling pathway	3.40E-02
118	GO:0006470: protein dephosphorylation	3.40E-02
119	GO:0010468: regulation of gene expression	3.51E-02
120	GO:0006979: response to oxidative stress	3.76E-02
121	GO:0009733: response to auxin	4.19E-02
122	GO:0009860: pollen tube growth	4.45E-02
123	GO:0048366: leaf development	4.74E-02

Rank	GO Term	Adjusted P value
1	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
2	GO:0004370: glycerol kinase activity	0.00E+00
3	GO:0033799: myricetin 3'-O-methyltransferase activity	0.00E+00
4	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
5	GO:0047763: caffeate O-methyltransferase activity	0.00E+00
6	GO:0019211: phosphatase activator activity	0.00E+00
7	GO:0004334: fumarylacetoacetase activity	0.00E+00
8	GO:0030755: quercetin 3-O-methyltransferase activity	0.00E+00
9	GO:0030744: luteolin O-methyltransferase activity	0.00E+00
10	GO:0017096: acetylserotonin O-methyltransferase activity	5.79E-05
11	GO:0035671: enone reductase activity	5.79E-05
12	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	5.79E-05
13	GO:0004112: cyclic-nucleotide phosphodiesterase activity	5.79E-05
14	GO:0003867: 4-aminobutyrate transaminase activity	5.79E-05
15	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	5.79E-05
16	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	5.79E-05
17	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	5.79E-05
18	GO:0050200: plasmalogen synthase activity	5.79E-05
19	GO:0052595: aliphatic-amine oxidase activity	5.79E-05
20	GO:0019200: carbohydrate kinase activity	1.41E-04
21	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	1.41E-04
22	GO:0004061: arylformamidase activity	1.41E-04
23	GO:0004383: guanylate cyclase activity	2.40E-04
24	GO:0005483: soluble NSF attachment protein activity	2.40E-04
25	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	2.40E-04
26	GO:0030527: structural constituent of chromatin	3.49E-04
27	GO:0000339: RNA cap binding	3.49E-04
28	GO:0004300: enoyl-CoA hydratase activity	3.49E-04
29	GO:0001653: peptide receptor activity	3.49E-04
30	GO:0050378: UDP-glucuronate 4-epimerase activity	4.66E-04
31	GO:0009916: alternative oxidase activity	4.66E-04
32	GO:0019905: syntaxin binding	4.66E-04
33	GO:0004356: glutamate-ammonia ligase activity	5.92E-04
34	GO:0005459: UDP-galactose transmembrane transporter activity	5.92E-04
35	GO:0036402: proteasome-activating ATPase activity	7.24E-04
36	GO:0019137: thioglucosidase activity	7.24E-04
37	GO:0004029: aldehyde dehydrogenase (NAD) activity	7.24E-04
38	GO:0004747: ribokinase activity	8.63E-04
39	GO:0051753: mannan synthase activity	8.63E-04
40	GO:0008865: fructokinase activity	1.16E-03
41	GO:0008142: oxysterol binding	1.32E-03
42	GO:0000989: transcription factor activity, transcription factor binding	1.48E-03
43	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.65E-03
44	GO:0015174: basic amino acid transmembrane transporter activity	1.65E-03
45	GO:0009672: auxin:proton symporter activity	1.65E-03
46	GO:0008794: arsenate reductase (glutaredoxin) activity	2.02E-03
47	GO:0008131: primary amine oxidase activity	2.62E-03
48	GO:0017025: TBP-class protein binding	2.82E-03
49	GO:0043424: protein histidine kinase binding	3.49E-03
50	GO:0004707: MAP kinase activity	3.72E-03
51	GO:0016760: cellulose synthase (UDP-forming) activity	4.20E-03
52	GO:0050662: coenzyme binding	5.48E-03
53	GO:0048038: quinone binding	6.02E-03
54	GO:0004197: cysteine-type endopeptidase activity	6.31E-03
55	GO:0016759: cellulose synthase activity	6.88E-03
56	GO:0102483: scopolin beta-glucosidase activity	8.71E-03
57	GO:0030247: polysaccharide binding	8.71E-03
58	GO:0050897: cobalt ion binding	1.04E-02
59	GO:0009055: electron carrier activity	1.11E-02
60	GO:0008422: beta-glucosidase activity	1.18E-02
61	GO:0005524: ATP binding	1.26E-02
62	GO:0016301: kinase activity	1.40E-02
63	GO:0004674: protein serine/threonine kinase activity	1.71E-02
64	GO:0015171: amino acid transmembrane transporter activity	1.75E-02
65	GO:0015035: protein disulfide oxidoreductase activity	2.14E-02
66	GO:0016746: transferase activity, transferring acyl groups	2.14E-02
67	GO:0005507: copper ion binding	2.63E-02
68	GO:0030170: pyridoxal phosphate binding	2.65E-02
69	GO:0004252: serine-type endopeptidase activity	2.65E-02
70	GO:0005516: calmodulin binding	2.78E-02
71	GO:0003824: catalytic activity	4.09E-02
72	GO:0046982: protein heterodimerization activity	4.17E-02
73	GO:0003682: chromatin binding	4.39E-02
74	GO:0050660: flavin adenine dinucleotide binding	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0030173: integral component of Golgi membrane	1.32E-05
2	GO:0031597: cytosolic proteasome complex	8.63E-04
3	GO:0031595: nuclear proteasome complex	1.01E-03
4	GO:0005886: plasma membrane	1.04E-03
5	GO:0008540: proteasome regulatory particle, base subcomplex	1.65E-03
6	GO:0005794: Golgi apparatus	1.81E-03
7	GO:0016021: integral component of membrane	2.35E-03
8	GO:0005783: endoplasmic reticulum	2.52E-03
9	GO:0030176: integral component of endoplasmic reticulum membrane	2.82E-03
10	GO:0005789: endoplasmic reticulum membrane	2.92E-03
11	GO:0070469: respiratory chain	3.49E-03
12	GO:0005802: trans-Golgi network	5.79E-03
13	GO:0000145: exocyst	6.31E-03
14	GO:0000785: chromatin	6.31E-03
15	GO:0005768: endosome	6.82E-03
16	GO:0032580: Golgi cisterna membrane	6.88E-03
17	GO:0000932: P-body	7.78E-03
18	GO:0009506: plasmodesma	8.82E-03
19	GO:0005774: vacuolar membrane	1.01E-02
20	GO:0000786: nucleosome	1.07E-02
21	GO:0005829: cytosol	1.21E-02
22	GO:0031201: SNARE complex	1.25E-02
23	GO:0000502: proteasome complex	1.63E-02
24	GO:0010008: endosome membrane	1.88E-02
25	GO:0005777: peroxisome	2.12E-02
26	GO:0005732: small nucleolar ribonucleoprotein complex	2.23E-02
27	GO:0005759: mitochondrial matrix	2.89E-02
28	GO:0031969: chloroplast membrane	4.92E-02