Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G61100

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006792: regulation of sulfur utilization0.00E+00
2GO:1901485: positive regulation of transcription factor catabolic process0.00E+00
3GO:0010200: response to chitin1.44E-07
4GO:0010411: xyloglucan metabolic process5.90E-07
5GO:0042546: cell wall biogenesis3.22E-06
6GO:0009751: response to salicylic acid6.73E-05
7GO:0030154: cell differentiation6.99E-05
8GO:0000271: polysaccharide biosynthetic process8.95E-05
9GO:0045489: pectin biosynthetic process1.00E-04
10GO:0010583: response to cyclopentenone1.50E-04
11GO:0050691: regulation of defense response to virus by host1.75E-04
12GO:0033481: galacturonate biosynthetic process1.75E-04
13GO:0019354: siroheme biosynthetic process1.75E-04
14GO:0009962: regulation of flavonoid biosynthetic process1.75E-04
15GO:2000029: regulation of proanthocyanidin biosynthetic process1.75E-04
16GO:0071555: cell wall organization2.78E-04
17GO:0031542: positive regulation of anthocyanin biosynthetic process3.96E-04
18GO:0071497: cellular response to freezing3.96E-04
19GO:0040008: regulation of growth4.21E-04
20GO:0009718: anthocyanin-containing compound biosynthetic process4.39E-04
21GO:0010581: regulation of starch biosynthetic process6.47E-04
22GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway6.47E-04
23GO:0005992: trehalose biosynthetic process6.82E-04
24GO:0006357: regulation of transcription from RNA polymerase II promoter7.31E-04
25GO:0031347: regulation of defense response7.87E-04
26GO:0009826: unidimensional cell growth8.32E-04
27GO:2000022: regulation of jasmonic acid mediated signaling pathway8.98E-04
28GO:1902358: sulfate transmembrane transport9.23E-04
29GO:0046345: abscisic acid catabolic process1.22E-03
30GO:0009741: response to brassinosteroid1.32E-03
31GO:0010438: cellular response to sulfur starvation1.56E-03
32GO:0016131: brassinosteroid metabolic process1.56E-03
33GO:2000762: regulation of phenylpropanoid metabolic process1.56E-03
34GO:0060918: auxin transport1.91E-03
35GO:1900425: negative regulation of defense response to bacterium1.91E-03
36GO:0009828: plant-type cell wall loosening1.96E-03
37GO:0010555: response to mannitol2.30E-03
38GO:2000067: regulation of root morphogenesis2.30E-03
39GO:0009753: response to jasmonic acid2.43E-03
40GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.47E-03
41GO:0051510: regulation of unidimensional cell growth2.70E-03
42GO:0050829: defense response to Gram-negative bacterium2.70E-03
43GO:0030162: regulation of proteolysis3.13E-03
44GO:0070413: trehalose metabolism in response to stress3.13E-03
45GO:0010439: regulation of glucosinolate biosynthetic process3.13E-03
46GO:2000031: regulation of salicylic acid mediated signaling pathway3.58E-03
47GO:0010099: regulation of photomorphogenesis3.58E-03
48GO:0007186: G-protein coupled receptor signaling pathway3.58E-03
49GO:0006468: protein phosphorylation3.69E-03
50GO:0016051: carbohydrate biosynthetic process3.84E-03
51GO:0051865: protein autoubiquitination4.05E-03
52GO:0009638: phototropism4.54E-03
53GO:0006779: porphyrin-containing compound biosynthetic process4.54E-03
54GO:0009738: abscisic acid-activated signaling pathway4.97E-03
55GO:0043069: negative regulation of programmed cell death5.05E-03
56GO:1903507: negative regulation of nucleic acid-templated transcription5.58E-03
57GO:0009750: response to fructose5.58E-03
58GO:0000038: very long-chain fatty acid metabolic process5.58E-03
59GO:2000652: regulation of secondary cell wall biogenesis5.58E-03
60GO:0009723: response to ethylene5.81E-03
61GO:0006355: regulation of transcription, DNA-templated5.90E-03
62GO:0016925: protein sumoylation6.13E-03
63GO:0016024: CDP-diacylglycerol biosynthetic process6.13E-03
64GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway6.62E-03
65GO:0009585: red, far-red light phototransduction6.66E-03
66GO:0030036: actin cytoskeleton organization6.70E-03
67GO:0018107: peptidyl-threonine phosphorylation6.70E-03
68GO:0010540: basipetal auxin transport7.28E-03
69GO:0034605: cellular response to heat7.28E-03
70GO:0010143: cutin biosynthetic process7.28E-03
71GO:0002237: response to molecule of bacterial origin7.28E-03
72GO:0009969: xyloglucan biosynthetic process7.89E-03
73GO:0009225: nucleotide-sugar metabolic process7.89E-03
74GO:0019953: sexual reproduction9.80E-03
75GO:0010026: trichome differentiation9.80E-03
76GO:0016998: cell wall macromolecule catabolic process1.05E-02
77GO:0010017: red or far-red light signaling pathway1.12E-02
78GO:0040007: growth1.19E-02
79GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.19E-02
80GO:0010214: seed coat development1.26E-02
81GO:0019722: calcium-mediated signaling1.26E-02
82GO:0009845: seed germination1.29E-02
83GO:0010087: phloem or xylem histogenesis1.41E-02
84GO:0048653: anther development1.41E-02
85GO:0010268: brassinosteroid homeostasis1.49E-02
86GO:0009958: positive gravitropism1.49E-02
87GO:0009737: response to abscisic acid1.56E-02
88GO:0009791: post-embryonic development1.64E-02
89GO:0009749: response to glucose1.64E-02
90GO:0016132: brassinosteroid biosynthetic process1.72E-02
91GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.72E-02
92GO:0002229: defense response to oomycetes1.72E-02
93GO:0009733: response to auxin1.81E-02
94GO:0009739: response to gibberellin1.84E-02
95GO:0016125: sterol metabolic process1.98E-02
96GO:0019760: glucosinolate metabolic process1.98E-02
97GO:0009639: response to red or far red light1.98E-02
98GO:0007267: cell-cell signaling2.06E-02
99GO:0001666: response to hypoxia2.24E-02
100GO:0035556: intracellular signal transduction2.31E-02
101GO:0048573: photoperiodism, flowering2.52E-02
102GO:0016311: dephosphorylation2.61E-02
103GO:0048767: root hair elongation2.80E-02
104GO:0009813: flavonoid biosynthetic process2.80E-02
105GO:0016567: protein ubiquitination2.85E-02
106GO:0010218: response to far red light2.90E-02
107GO:0007568: aging3.00E-02
108GO:0048527: lateral root development3.00E-02
109GO:0080167: response to karrikin3.16E-02
110GO:0009637: response to blue light3.20E-02
111GO:0009867: jasmonic acid mediated signaling pathway3.20E-02
112GO:0006351: transcription, DNA-templated3.65E-02
113GO:0042542: response to hydrogen peroxide3.73E-02
114GO:0045454: cell redox homeostasis3.78E-02
115GO:0010114: response to red light3.84E-02
116GO:0009744: response to sucrose3.84E-02
117GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.39E-02
118GO:0009664: plant-type cell wall organization4.51E-02
119GO:0006629: lipid metabolic process4.65E-02
120GO:0009809: lignin biosynthetic process4.74E-02
121GO:0006486: protein glycosylation4.74E-02
122GO:0051603: proteolysis involved in cellular protein catabolic process4.86E-02
RankGO TermAdjusted P value
1GO:0090411: brassinosteroid binding0.00E+00
2GO:0047890: flavanone 4-reductase activity0.00E+00
3GO:0004851: uroporphyrin-III C-methyltransferase activity0.00E+00
4GO:0045552: dihydrokaempferol 4-reductase activity0.00E+00
5GO:0016762: xyloglucan:xyloglucosyl transferase activity5.68E-06
6GO:0016798: hydrolase activity, acting on glycosyl bonds1.77E-05
7GO:0080132: fatty acid alpha-hydroxylase activity1.75E-04
8GO:0044212: transcription regulatory region DNA binding2.78E-04
9GO:0004805: trehalose-phosphatase activity2.90E-04
10GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.01E-04
11GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.67E-04
12GO:0050736: O-malonyltransferase activity3.96E-04
13GO:0048531: beta-1,3-galactosyltransferase activity3.96E-04
14GO:0001664: G-protein coupled receptor binding6.47E-04
15GO:0031683: G-protein beta/gamma-subunit complex binding6.47E-04
16GO:0010295: (+)-abscisic acid 8'-hydroxylase activity6.47E-04
17GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity8.98E-04
18GO:0033843: xyloglucan 6-xylosyltransferase activity9.23E-04
19GO:0004674: protein serine/threonine kinase activity1.16E-03
20GO:0050378: UDP-glucuronate 4-epimerase activity1.22E-03
21GO:0043565: sequence-specific DNA binding1.27E-03
22GO:0031386: protein tag1.56E-03
23GO:0002020: protease binding1.56E-03
24GO:0016758: transferase activity, transferring hexosyl groups1.78E-03
25GO:0035252: UDP-xylosyltransferase activity1.91E-03
26GO:0010427: abscisic acid binding1.91E-03
27GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.91E-03
28GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.91E-03
29GO:0016791: phosphatase activity1.96E-03
30GO:0003700: transcription factor activity, sequence-specific DNA binding2.19E-03
31GO:0016621: cinnamoyl-CoA reductase activity2.70E-03
32GO:0008271: secondary active sulfate transmembrane transporter activity3.58E-03
33GO:0016757: transferase activity, transferring glycosyl groups4.19E-03
34GO:0004864: protein phosphatase inhibitor activity5.05E-03
35GO:0015116: sulfate transmembrane transporter activity6.13E-03
36GO:0000976: transcription regulatory region sequence-specific DNA binding6.13E-03
37GO:0046983: protein dimerization activity6.94E-03
38GO:0003712: transcription cofactor activity7.89E-03
39GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds7.97E-03
40GO:0004672: protein kinase activity8.20E-03
41GO:0003714: transcription corepressor activity9.15E-03
42GO:0008134: transcription factor binding9.15E-03
43GO:0004402: histone acetyltransferase activity1.41E-02
44GO:0001085: RNA polymerase II transcription factor binding1.49E-02
45GO:0050662: coenzyme binding1.56E-02
46GO:0004872: receptor activity1.64E-02
47GO:0016759: cellulose synthase activity1.98E-02
48GO:0005200: structural constituent of cytoskeleton2.06E-02
49GO:0016722: oxidoreductase activity, oxidizing metal ions2.06E-02
50GO:0004842: ubiquitin-protein transferase activity2.46E-02
51GO:0016301: kinase activity2.51E-02
52GO:0004806: triglyceride lipase activity2.52E-02
53GO:0003677: DNA binding2.89E-02
54GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.00E-02
55GO:0004185: serine-type carboxypeptidase activity3.84E-02
56GO:0004871: signal transducer activity3.96E-02
57GO:0015293: symporter activity4.17E-02
58GO:0016298: lipase activity4.86E-02
59GO:0009055: electron carrier activity4.98E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0009505: plant-type cell wall1.06E-04
3GO:0005794: Golgi apparatus4.21E-04
4GO:0042406: extrinsic component of endoplasmic reticulum membrane6.47E-04
5GO:0031225: anchored component of membrane6.66E-04
6GO:0048046: apoplast1.61E-03
7GO:0005615: extracellular space3.20E-03
8GO:0046658: anchored component of plasma membrane3.96E-03
9GO:0005618: cell wall5.83E-03
10GO:0000139: Golgi membrane7.11E-03
11GO:0005576: extracellular region1.55E-02
12GO:0032580: Golgi cisterna membrane1.98E-02
13GO:0005667: transcription factor complex2.42E-02
14GO:0005886: plasma membrane2.52E-02
15GO:0019005: SCF ubiquitin ligase complex2.71E-02
16GO:0000786: nucleosome3.10E-02
17GO:0009506: plasmodesma3.20E-02
18GO:0005856: cytoskeleton4.17E-02
Gene type



Gene DE type