co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G60270

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015822: ornithine transport	0.00E+00
2	GO:0009715: chalcone biosynthetic process	0.00E+00
3	GO:1901038: cyanidin 3-O-glucoside metabolic process	0.00E+00
4	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
5	GO:0010425: DNA methylation on cytosine within a CNG sequence	0.00E+00
6	GO:0071555: cell wall organization	8.17E-10
7	GO:0051555: flavonol biosynthetic process	3.76E-08
8	GO:0009813: flavonoid biosynthetic process	3.24E-07
9	GO:0080167: response to karrikin	5.51E-07
10	GO:0010224: response to UV-B	5.28E-05
11	GO:0045489: pectin biosynthetic process	5.67E-05
12	GO:1901349: glucosinolate transport	1.33E-04
13	GO:0090449: phloem glucosinolate loading	1.33E-04
14	GO:0048438: floral whorl development	1.33E-04
15	GO:0000066: mitochondrial ornithine transport	1.33E-04
16	GO:0000272: polysaccharide catabolic process	2.29E-04
17	GO:0030036: actin cytoskeleton organization	3.02E-04
18	GO:0010069: zygote asymmetric cytokinesis in embryo sac	3.07E-04
19	GO:0009629: response to gravity	3.07E-04
20	GO:0007154: cell communication	3.07E-04
21	GO:0010220: positive regulation of vernalization response	3.07E-04
22	GO:1900386: positive regulation of flavonol biosynthetic process	3.07E-04
23	GO:0071395: cellular response to jasmonic acid stimulus	3.07E-04
24	GO:0042546: cell wall biogenesis	4.02E-04
25	GO:0010253: UDP-rhamnose biosynthetic process	5.06E-04
26	GO:0009411: response to UV	6.80E-04
27	GO:0051016: barbed-end actin filament capping	7.24E-04
28	GO:0000271: polysaccharide biosynthetic process	8.59E-04
29	GO:0009765: photosynthesis, light harvesting	9.59E-04
30	GO:0051567: histone H3-K9 methylation	9.59E-04
31	GO:0034613: cellular protein localization	9.59E-04
32	GO:0009694: jasmonic acid metabolic process	9.59E-04
33	GO:0071554: cell wall organization or biogenesis	1.13E-03
34	GO:0010583: response to cyclopentenone	1.20E-03
35	GO:0071368: cellular response to cytokinin stimulus	1.21E-03
36	GO:0042732: D-xylose metabolic process	1.49E-03
37	GO:0010315: auxin efflux	1.49E-03
38	GO:0006559: L-phenylalanine catabolic process	1.49E-03
39	GO:0000060: protein import into nucleus, translocation	1.49E-03
40	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.49E-03
41	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.78E-03
42	GO:0010077: maintenance of inflorescence meristem identity	1.78E-03
43	GO:0045814: negative regulation of gene expression, epigenetic	1.78E-03
44	GO:0010076: maintenance of floral meristem identity	1.78E-03
45	GO:0017148: negative regulation of translation	1.78E-03
46	GO:0009554: megasporogenesis	1.78E-03
47	GO:0009739: response to gibberellin	1.98E-03
48	GO:0006400: tRNA modification	2.09E-03
49	GO:0010218: response to far red light	2.30E-03
50	GO:0007155: cell adhesion	2.42E-03
51	GO:0030091: protein repair	2.42E-03
52	GO:0045010: actin nucleation	2.42E-03
53	GO:0031540: regulation of anthocyanin biosynthetic process	2.42E-03
54	GO:0030154: cell differentiation	2.48E-03
55	GO:0016051: carbohydrate biosynthetic process	2.64E-03
56	GO:0022900: electron transport chain	2.77E-03
57	GO:0009611: response to wounding	3.02E-03
58	GO:0010114: response to red light	3.40E-03
59	GO:0010192: mucilage biosynthetic process	3.89E-03
60	GO:0009698: phenylpropanoid metabolic process	4.30E-03
61	GO:0016024: CDP-diacylglycerol biosynthetic process	4.72E-03
62	GO:0010582: floral meristem determinacy	4.72E-03
63	GO:0016925: protein sumoylation	4.72E-03
64	GO:0009909: regulation of flower development	5.05E-03
65	GO:0009718: anthocyanin-containing compound biosynthetic process	5.15E-03
66	GO:0048768: root hair cell tip growth	5.60E-03
67	GO:0010143: cutin biosynthetic process	5.60E-03
68	GO:0009225: nucleotide-sugar metabolic process	6.06E-03
69	GO:0009833: plant-type primary cell wall biogenesis	6.53E-03
70	GO:0009695: jasmonic acid biosynthetic process	7.51E-03
71	GO:0009768: photosynthesis, light harvesting in photosystem I	7.51E-03
72	GO:0006306: DNA methylation	8.02E-03
73	GO:0031408: oxylipin biosynthetic process	8.02E-03
74	GO:0051260: protein homooligomerization	8.02E-03
75	GO:0010584: pollen exine formation	9.63E-03
76	GO:0042127: regulation of cell proliferation	9.63E-03
77	GO:0009733: response to auxin	1.02E-02
78	GO:0015991: ATP hydrolysis coupled proton transport	1.08E-02
79	GO:0007623: circadian rhythm	1.12E-02
80	GO:0006520: cellular amino acid metabolic process	1.13E-02
81	GO:0006342: chromatin silencing	1.13E-02
82	GO:0015986: ATP synthesis coupled proton transport	1.19E-02
83	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.32E-02
84	GO:0016125: sterol metabolic process	1.51E-02
85	GO:0006464: cellular protein modification process	1.51E-02
86	GO:0009911: positive regulation of flower development	1.71E-02
87	GO:0010411: xyloglucan metabolic process	1.92E-02
88	GO:0048573: photoperiodism, flowering	1.92E-02
89	GO:0016311: dephosphorylation	1.99E-02
90	GO:0030244: cellulose biosynthetic process	2.06E-02
91	GO:0018298: protein-chromophore linkage	2.06E-02
92	GO:0009832: plant-type cell wall biogenesis	2.14E-02
93	GO:0009407: toxin catabolic process	2.21E-02
94	GO:0010119: regulation of stomatal movement	2.29E-02
95	GO:0009867: jasmonic acid mediated signaling pathway	2.44E-02
96	GO:0009637: response to blue light	2.44E-02
97	GO:0006839: mitochondrial transport	2.68E-02
98	GO:0006631: fatty acid metabolic process	2.76E-02
99	GO:0009926: auxin polar transport	2.92E-02
100	GO:0009636: response to toxic substance	3.18E-02
101	GO:0031347: regulation of defense response	3.35E-02
102	GO:0000165: MAPK cascade	3.35E-02
103	GO:0009753: response to jasmonic acid	3.42E-02
104	GO:0009809: lignin biosynthetic process	3.62E-02
105	GO:0006857: oligopeptide transport	3.80E-02
106	GO:0043086: negative regulation of catalytic activity	4.07E-02
107	GO:0051726: regulation of cell cycle	4.84E-02
108	GO:0009742: brassinosteroid mediated signaling pathway	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
2	GO:0016210: naringenin-chalcone synthase activity	0.00E+00
3	GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity	0.00E+00
4	GO:0030795: jasmonate O-methyltransferase activity	0.00E+00
5	GO:0102078: methyl jasmonate methylesterase activity	0.00E+00
6	GO:0045486: naringenin 3-dioxygenase activity	0.00E+00
7	GO:1990055: phenylacetaldehyde synthase activity	0.00E+00
8	GO:0016757: transferase activity, transferring glycosyl groups	4.77E-06
9	GO:0045430: chalcone isomerase activity	1.47E-05
10	GO:0016161: beta-amylase activity	5.10E-05
11	GO:0016759: cellulose synthase activity	1.05E-04
12	GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	1.33E-04
13	GO:0010313: phytochrome binding	1.33E-04
14	GO:0090448: glucosinolate:proton symporter activity	1.33E-04
15	GO:0004837: tyrosine decarboxylase activity	1.33E-04
16	GO:0010280: UDP-L-rhamnose synthase activity	3.07E-04
17	GO:0000064: L-ornithine transmembrane transporter activity	3.07E-04
18	GO:0050377: UDP-glucose 4,6-dehydratase activity	3.07E-04
19	GO:0048531: beta-1,3-galactosyltransferase activity	3.07E-04
20	GO:0008460: dTDP-glucose 4,6-dehydratase activity	3.07E-04
21	GO:0031418: L-ascorbic acid binding	4.74E-04
22	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	6.25E-04
23	GO:0048027: mRNA 5'-UTR binding	7.24E-04
24	GO:0080044: quercetin 7-O-glucosyltransferase activity	7.77E-04
25	GO:0080043: quercetin 3-O-glucosyltransferase activity	7.77E-04
26	GO:0080032: methyl jasmonate esterase activity	9.59E-04
27	GO:0052793: pectin acetylesterase activity	9.59E-04
28	GO:0098599: palmitoyl hydrolase activity	9.59E-04
29	GO:0046527: glucosyltransferase activity	9.59E-04
30	GO:0045431: flavonol synthase activity	1.21E-03
31	GO:0031386: protein tag	1.21E-03
32	GO:0080030: methyl indole-3-acetate esterase activity	1.49E-03
33	GO:0008474: palmitoyl-(protein) hydrolase activity	1.49E-03
34	GO:0008429: phosphatidylethanolamine binding	1.49E-03
35	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.49E-03
36	GO:0102229: amylopectin maltohydrolase activity	1.49E-03
37	GO:0035252: UDP-xylosyltransferase activity	1.49E-03
38	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.49E-03
39	GO:0016413: O-acetyltransferase activity	1.52E-03
40	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	1.78E-03
41	GO:0016621: cinnamoyl-CoA reductase activity	2.09E-03
42	GO:0043295: glutathione binding	2.09E-03
43	GO:0046982: protein heterodimerization activity	2.91E-03
44	GO:0016207: 4-coumarate-CoA ligase activity	3.13E-03
45	GO:0004860: protein kinase inhibitor activity	4.30E-03
46	GO:0046961: proton-transporting ATPase activity, rotational mechanism	4.30E-03
47	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.60E-03
48	GO:0051119: sugar transmembrane transporter activity	6.06E-03
49	GO:0031409: pigment binding	6.53E-03
50	GO:0016758: transferase activity, transferring hexosyl groups	7.91E-03
51	GO:0004176: ATP-dependent peptidase activity	8.02E-03
52	GO:0016760: cellulose synthase (UDP-forming) activity	9.08E-03
53	GO:0016887: ATPase activity	1.12E-02
54	GO:0016853: isomerase activity	1.19E-02
55	GO:0019901: protein kinase binding	1.25E-02
56	GO:0008194: UDP-glycosyltransferase activity	1.26E-02
57	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.32E-02
58	GO:0004518: nuclease activity	1.38E-02
59	GO:0051015: actin filament binding	1.44E-02
60	GO:0016791: phosphatase activity	1.51E-02
61	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.57E-02
62	GO:0008237: metallopeptidase activity	1.57E-02
63	GO:0005200: structural constituent of cytoskeleton	1.57E-02
64	GO:0016740: transferase activity	1.71E-02
65	GO:0016788: hydrolase activity, acting on ester bonds	1.77E-02
66	GO:0016168: chlorophyll binding	1.78E-02
67	GO:0030247: polysaccharide binding	1.92E-02
68	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.92E-02
69	GO:0004222: metalloendopeptidase activity	2.21E-02
70	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.21E-02
71	GO:0052689: carboxylic ester hydrolase activity	2.39E-02
72	GO:0004364: glutathione transferase activity	2.84E-02
73	GO:0051537: 2 iron, 2 sulfur cluster binding	3.09E-02
74	GO:0009055: electron carrier activity	3.42E-02
75	GO:0005215: transporter activity	3.65E-02
76	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.17E-02
77	GO:0004650: polygalacturonase activity	4.36E-02
78	GO:0022857: transmembrane transporter activity	4.45E-02
79	GO:0016874: ligase activity	4.45E-02
80	GO:0003779: actin binding	4.55E-02
81	GO:0015035: protein disulfide oxidoreductase activity	4.74E-02
82	GO:0016746: transferase activity, transferring acyl groups	4.74E-02

Rank	GO Term	Adjusted P value
1	GO:0005794: Golgi apparatus	8.46E-05
2	GO:0031225: anchored component of membrane	3.02E-04
3	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	3.07E-04
4	GO:0042406: extrinsic component of endoplasmic reticulum membrane	5.06E-04
5	GO:0000139: Golgi membrane	9.47E-04
6	GO:0016021: integral component of membrane	1.87E-03
7	GO:0046658: anchored component of plasma membrane	2.44E-03
8	GO:0009506: plasmodesma	5.34E-03
9	GO:0005753: mitochondrial proton-transporting ATP synthase complex	6.06E-03
10	GO:0030076: light-harvesting complex	6.06E-03
11	GO:0005886: plasma membrane	7.15E-03
12	GO:0043231: intracellular membrane-bounded organelle	7.26E-03
13	GO:0005783: endoplasmic reticulum	8.56E-03
14	GO:0009705: plant-type vacuole membrane	1.12E-02
15	GO:0009522: photosystem I	1.19E-02
16	GO:0009505: plant-type cell wall	1.20E-02
17	GO:0009523: photosystem II	1.25E-02
18	GO:0005618: cell wall	2.33E-02
19	GO:0000786: nucleosome	2.36E-02
20	GO:0005743: mitochondrial inner membrane	2.97E-02
21	GO:0005856: cytoskeleton	3.18E-02
22	GO:0005576: extracellular region	3.55E-02