GO Enrichment Analysis of Co-expressed Genes with
AT1G59960
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045116: protein neddylation | 6.80E-07 |
| 2 | GO:0055081: anion homeostasis | 1.57E-05 |
| 3 | GO:0006099: tricarboxylic acid cycle | 1.86E-04 |
| 4 | GO:0018279: protein N-linked glycosylation via asparagine | 1.98E-04 |
| 5 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 2.97E-04 |
| 6 | GO:0043069: negative regulation of programmed cell death | 6.38E-04 |
| 7 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 8.30E-04 |
| 8 | GO:0006446: regulation of translational initiation | 8.97E-04 |
| 9 | GO:0006541: glutamine metabolic process | 8.97E-04 |
| 10 | GO:0070588: calcium ion transmembrane transport | 9.64E-04 |
| 11 | GO:0000162: tryptophan biosynthetic process | 1.03E-03 |
| 12 | GO:0034976: response to endoplasmic reticulum stress | 1.03E-03 |
| 13 | GO:0042254: ribosome biogenesis | 1.15E-03 |
| 14 | GO:0006334: nucleosome assembly | 1.25E-03 |
| 15 | GO:0007131: reciprocal meiotic recombination | 1.33E-03 |
| 16 | GO:0019722: calcium-mediated signaling | 1.48E-03 |
| 17 | GO:0010193: response to ozone | 1.99E-03 |
| 18 | GO:0010252: auxin homeostasis | 2.26E-03 |
| 19 | GO:0009735: response to cytokinin | 3.26E-03 |
| 20 | GO:0000209: protein polyubiquitination | 4.37E-03 |
| 21 | GO:0009965: leaf morphogenesis | 4.60E-03 |
| 22 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 4.84E-03 |
| 23 | GO:0009664: plant-type cell wall organization | 4.96E-03 |
| 24 | GO:0006414: translational elongation | 5.30E-03 |
| 25 | GO:0006412: translation | 7.69E-03 |
| 26 | GO:0006413: translational initiation | 9.26E-03 |
| 27 | GO:0006470: protein dephosphorylation | 1.07E-02 |
| 28 | GO:0009617: response to bacterium | 1.10E-02 |
| 29 | GO:0009826: unidimensional cell growth | 1.29E-02 |
| 30 | GO:0015979: photosynthesis | 1.69E-02 |
| 31 | GO:0045454: cell redox homeostasis | 1.75E-02 |
| 32 | GO:0032259: methylation | 1.97E-02 |
| 33 | GO:0006281: DNA repair | 2.03E-02 |
| 34 | GO:0006397: mRNA processing | 2.09E-02 |
| 35 | GO:0009734: auxin-activated signaling pathway | 2.59E-02 |
| 36 | GO:0006457: protein folding | 3.68E-02 |
| 37 | GO:0009414: response to water deprivation | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016881: acid-amino acid ligase activity | 0.00E+00 |
| 2 | GO:0019781: NEDD8 activating enzyme activity | 2.09E-08 |
| 3 | GO:0008641: small protein activating enzyme activity | 6.80E-07 |
| 4 | GO:0048037: cofactor binding | 1.57E-05 |
| 5 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 4.12E-05 |
| 6 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 4.12E-05 |
| 7 | GO:0004049: anthranilate synthase activity | 7.34E-05 |
| 8 | GO:0004324: ferredoxin-NADP+ reductase activity | 7.34E-05 |
| 9 | GO:0003746: translation elongation factor activity | 1.77E-04 |
| 10 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.98E-04 |
| 11 | GO:0008143: poly(A) binding | 3.49E-04 |
| 12 | GO:0005388: calcium-transporting ATPase activity | 8.30E-04 |
| 13 | GO:0031624: ubiquitin conjugating enzyme binding | 8.97E-04 |
| 14 | GO:0005528: FK506 binding | 1.10E-03 |
| 15 | GO:0003756: protein disulfide isomerase activity | 1.48E-03 |
| 16 | GO:0010181: FMN binding | 1.82E-03 |
| 17 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 1.99E-03 |
| 18 | GO:0003735: structural constituent of ribosome | 2.27E-03 |
| 19 | GO:0000166: nucleotide binding | 3.57E-03 |
| 20 | GO:0042393: histone binding | 3.91E-03 |
| 21 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.72E-03 |
| 22 | GO:0005507: copper ion binding | 5.06E-03 |
| 23 | GO:0008565: protein transporter activity | 8.80E-03 |
| 24 | GO:0016491: oxidoreductase activity | 9.46E-03 |
| 25 | GO:0003729: mRNA binding | 1.07E-02 |
| 26 | GO:0003743: translation initiation factor activity | 1.09E-02 |
| 27 | GO:0008168: methyltransferase activity | 1.29E-02 |
| 28 | GO:0046982: protein heterodimerization activity | 1.31E-02 |
| 29 | GO:0061630: ubiquitin protein ligase activity | 1.60E-02 |
| 30 | GO:0004722: protein serine/threonine phosphatase activity | 1.87E-02 |
| 31 | GO:0005516: calmodulin binding | 4.09E-02 |
| 32 | GO:0005525: GTP binding | 4.36E-02 |
| 33 | GO:0005509: calcium ion binding | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032783: ELL-EAF complex | 1.57E-05 |
| 2 | GO:0005773: vacuole | 3.27E-05 |
| 3 | GO:0008250: oligosaccharyltransferase complex | 1.98E-04 |
| 4 | GO:0045273: respiratory chain complex II | 4.04E-04 |
| 5 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 4.04E-04 |
| 6 | GO:0005840: ribosome | 1.02E-03 |
| 7 | GO:0005758: mitochondrial intermembrane space | 1.10E-03 |
| 8 | GO:0022625: cytosolic large ribosomal subunit | 1.46E-03 |
| 9 | GO:0005829: cytosol | 1.63E-03 |
| 10 | GO:0005730: nucleolus | 1.85E-03 |
| 11 | GO:0005794: Golgi apparatus | 2.32E-03 |
| 12 | GO:0005788: endoplasmic reticulum lumen | 2.65E-03 |
| 13 | GO:0000151: ubiquitin ligase complex | 3.05E-03 |
| 14 | GO:0015934: large ribosomal subunit | 3.36E-03 |
| 15 | GO:0022626: cytosolic ribosome | 3.41E-03 |
| 16 | GO:0005737: cytoplasm | 5.13E-03 |
| 17 | GO:0005747: mitochondrial respiratory chain complex I | 5.98E-03 |
| 18 | GO:0009705: plant-type vacuole membrane | 9.73E-03 |
| 19 | GO:0005783: endoplasmic reticulum | 1.12E-02 |
| 20 | GO:0046658: anchored component of plasma membrane | 1.18E-02 |
| 21 | GO:0022627: cytosolic small ribosomal subunit | 1.18E-02 |
| 22 | GO:0009506: plasmodesma | 2.50E-02 |
| 23 | GO:0005774: vacuolar membrane | 2.50E-02 |
| 24 | GO:0005887: integral component of plasma membrane | 2.53E-02 |
| 25 | GO:0005618: cell wall | 2.86E-02 |
| 26 | GO:0005886: plasma membrane | 4.56E-02 |