GO Enrichment Analysis of Co-expressed Genes with
AT1G56580
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 3 | GO:0071555: cell wall organization | 4.51E-05 |
| 4 | GO:0006659: phosphatidylserine biosynthetic process | 6.10E-05 |
| 5 | GO:0019510: S-adenosylhomocysteine catabolic process | 6.10E-05 |
| 6 | GO:0033353: S-adenosylmethionine cycle | 1.48E-04 |
| 7 | GO:0015712: hexose phosphate transport | 1.48E-04 |
| 8 | GO:0017157: regulation of exocytosis | 2.51E-04 |
| 9 | GO:0035436: triose phosphate transmembrane transport | 2.51E-04 |
| 10 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 3.65E-04 |
| 11 | GO:0007231: osmosensory signaling pathway | 3.65E-04 |
| 12 | GO:0009791: post-embryonic development | 3.87E-04 |
| 13 | GO:0033500: carbohydrate homeostasis | 4.88E-04 |
| 14 | GO:0006021: inositol biosynthetic process | 4.88E-04 |
| 15 | GO:0009765: photosynthesis, light harvesting | 4.88E-04 |
| 16 | GO:0045727: positive regulation of translation | 4.88E-04 |
| 17 | GO:0015713: phosphoglycerate transport | 4.88E-04 |
| 18 | GO:0016123: xanthophyll biosynthetic process | 6.19E-04 |
| 19 | GO:0016120: carotene biosynthetic process | 6.19E-04 |
| 20 | GO:0006656: phosphatidylcholine biosynthetic process | 6.19E-04 |
| 21 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 7.57E-04 |
| 22 | GO:0030643: cellular phosphate ion homeostasis | 9.01E-04 |
| 23 | GO:0009094: L-phenylalanine biosynthetic process | 9.01E-04 |
| 24 | GO:0007155: cell adhesion | 1.21E-03 |
| 25 | GO:0070413: trehalose metabolism in response to stress | 1.21E-03 |
| 26 | GO:0006875: cellular metal ion homeostasis | 1.21E-03 |
| 27 | GO:0032544: plastid translation | 1.38E-03 |
| 28 | GO:0048589: developmental growth | 1.55E-03 |
| 29 | GO:0010192: mucilage biosynthetic process | 1.92E-03 |
| 30 | GO:0000272: polysaccharide catabolic process | 2.12E-03 |
| 31 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.12E-03 |
| 32 | GO:0006816: calcium ion transport | 2.12E-03 |
| 33 | GO:0042545: cell wall modification | 2.23E-03 |
| 34 | GO:0045037: protein import into chloroplast stroma | 2.32E-03 |
| 35 | GO:0009725: response to hormone | 2.52E-03 |
| 36 | GO:0070588: calcium ion transmembrane transport | 2.96E-03 |
| 37 | GO:0009833: plant-type primary cell wall biogenesis | 3.18E-03 |
| 38 | GO:0006071: glycerol metabolic process | 3.18E-03 |
| 39 | GO:0005992: trehalose biosynthetic process | 3.42E-03 |
| 40 | GO:0007010: cytoskeleton organization | 3.42E-03 |
| 41 | GO:0045490: pectin catabolic process | 3.93E-03 |
| 42 | GO:0080092: regulation of pollen tube growth | 4.15E-03 |
| 43 | GO:0030245: cellulose catabolic process | 4.15E-03 |
| 44 | GO:0006730: one-carbon metabolic process | 4.15E-03 |
| 45 | GO:0009294: DNA mediated transformation | 4.40E-03 |
| 46 | GO:0016117: carotenoid biosynthetic process | 4.92E-03 |
| 47 | GO:0000271: polysaccharide biosynthetic process | 5.19E-03 |
| 48 | GO:0042631: cellular response to water deprivation | 5.19E-03 |
| 49 | GO:0045489: pectin biosynthetic process | 5.46E-03 |
| 50 | GO:0008654: phospholipid biosynthetic process | 6.03E-03 |
| 51 | GO:0009658: chloroplast organization | 6.06E-03 |
| 52 | GO:0071554: cell wall organization or biogenesis | 6.32E-03 |
| 53 | GO:0010583: response to cyclopentenone | 6.61E-03 |
| 54 | GO:0048235: pollen sperm cell differentiation | 6.61E-03 |
| 55 | GO:0007264: small GTPase mediated signal transduction | 6.61E-03 |
| 56 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.78E-03 |
| 57 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 8.48E-03 |
| 58 | GO:0030244: cellulose biosynthetic process | 9.82E-03 |
| 59 | GO:0018298: protein-chromophore linkage | 9.82E-03 |
| 60 | GO:0009817: defense response to fungus, incompatible interaction | 9.82E-03 |
| 61 | GO:0009832: plant-type cell wall biogenesis | 1.02E-02 |
| 62 | GO:0048767: root hair elongation | 1.02E-02 |
| 63 | GO:0007568: aging | 1.09E-02 |
| 64 | GO:0016051: carbohydrate biosynthetic process | 1.16E-02 |
| 65 | GO:0009744: response to sucrose | 1.39E-02 |
| 66 | GO:0006364: rRNA processing | 1.71E-02 |
| 67 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.76E-02 |
| 68 | GO:0048367: shoot system development | 1.97E-02 |
| 69 | GO:0009742: brassinosteroid mediated signaling pathway | 2.29E-02 |
| 70 | GO:0009845: seed germination | 2.73E-02 |
| 71 | GO:0006414: translational elongation | 2.95E-02 |
| 72 | GO:0007623: circadian rhythm | 3.25E-02 |
| 73 | GO:0009617: response to bacterium | 3.68E-02 |
| 74 | GO:0010468: regulation of gene expression | 3.68E-02 |
| 75 | GO:0009860: pollen tube growth | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 2 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 3 | GO:0015088: copper uptake transmembrane transporter activity | 6.10E-05 |
| 4 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 6.10E-05 |
| 5 | GO:0004560: alpha-L-fucosidase activity | 6.10E-05 |
| 6 | GO:0004013: adenosylhomocysteinase activity | 6.10E-05 |
| 7 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 1.48E-04 |
| 8 | GO:0010297: heteropolysaccharide binding | 1.48E-04 |
| 9 | GO:0004512: inositol-3-phosphate synthase activity | 1.48E-04 |
| 10 | GO:0008967: phosphoglycolate phosphatase activity | 1.48E-04 |
| 11 | GO:0016757: transferase activity, transferring glycosyl groups | 1.53E-04 |
| 12 | GO:0071917: triose-phosphate transmembrane transporter activity | 2.51E-04 |
| 13 | GO:0003913: DNA photolyase activity | 2.51E-04 |
| 14 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.51E-04 |
| 15 | GO:0015120: phosphoglycerate transmembrane transporter activity | 4.88E-04 |
| 16 | GO:0047769: arogenate dehydratase activity | 4.88E-04 |
| 17 | GO:0004664: prephenate dehydratase activity | 4.88E-04 |
| 18 | GO:0019905: syntaxin binding | 4.88E-04 |
| 19 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.88E-04 |
| 20 | GO:0016759: cellulose synthase activity | 4.99E-04 |
| 21 | GO:0017137: Rab GTPase binding | 6.19E-04 |
| 22 | GO:0000210: NAD+ diphosphatase activity | 7.57E-04 |
| 23 | GO:0051753: mannan synthase activity | 9.01E-04 |
| 24 | GO:0003746: translation elongation factor activity | 9.58E-04 |
| 25 | GO:0009881: photoreceptor activity | 1.05E-03 |
| 26 | GO:0008135: translation factor activity, RNA binding | 1.38E-03 |
| 27 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 1.55E-03 |
| 28 | GO:0005381: iron ion transmembrane transporter activity | 1.73E-03 |
| 29 | GO:0045330: aspartyl esterase activity | 1.79E-03 |
| 30 | GO:0004805: trehalose-phosphatase activity | 1.92E-03 |
| 31 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.12E-03 |
| 32 | GO:0030599: pectinesterase activity | 2.16E-03 |
| 33 | GO:0005262: calcium channel activity | 2.52E-03 |
| 34 | GO:0004565: beta-galactosidase activity | 2.52E-03 |
| 35 | GO:0004857: enzyme inhibitor activity | 3.42E-03 |
| 36 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 4.15E-03 |
| 37 | GO:0008810: cellulase activity | 4.40E-03 |
| 38 | GO:0016760: cellulose synthase (UDP-forming) activity | 4.40E-03 |
| 39 | GO:0005355: glucose transmembrane transporter activity | 5.74E-03 |
| 40 | GO:0050662: coenzyme binding | 5.74E-03 |
| 41 | GO:0004872: receptor activity | 6.03E-03 |
| 42 | GO:0048038: quinone binding | 6.32E-03 |
| 43 | GO:0016791: phosphatase activity | 7.21E-03 |
| 44 | GO:0005200: structural constituent of cytoskeleton | 7.52E-03 |
| 45 | GO:0016413: O-acetyltransferase activity | 7.84E-03 |
| 46 | GO:0016597: amino acid binding | 7.84E-03 |
| 47 | GO:0008375: acetylglucosaminyltransferase activity | 8.81E-03 |
| 48 | GO:0030247: polysaccharide binding | 9.14E-03 |
| 49 | GO:0005096: GTPase activator activity | 1.02E-02 |
| 50 | GO:0050897: cobalt ion binding | 1.09E-02 |
| 51 | GO:0003924: GTPase activity | 1.11E-02 |
| 52 | GO:0004185: serine-type carboxypeptidase activity | 1.39E-02 |
| 53 | GO:0051287: NAD binding | 1.59E-02 |
| 54 | GO:0004650: polygalacturonase activity | 2.06E-02 |
| 55 | GO:0016787: hydrolase activity | 2.23E-02 |
| 56 | GO:0016758: transferase activity, transferring hexosyl groups | 2.53E-02 |
| 57 | GO:0019843: rRNA binding | 2.58E-02 |
| 58 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.61E-02 |
| 59 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.63E-02 |
| 60 | GO:0004252: serine-type endopeptidase activity | 2.78E-02 |
| 61 | GO:0005507: copper ion binding | 2.82E-02 |
| 62 | GO:0005516: calmodulin binding | 2.98E-02 |
| 63 | GO:0015297: antiporter activity | 3.14E-02 |
| 64 | GO:0005525: GTP binding | 3.25E-02 |
| 65 | GO:0016788: hydrolase activity, acting on ester bonds | 4.49E-02 |
| 66 | GO:0050660: flavin adenine dinucleotide binding | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009505: plant-type cell wall | 8.60E-06 |
| 2 | GO:0048046: apoplast | 3.02E-05 |
| 3 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.48E-04 |
| 4 | GO:0031225: anchored component of membrane | 1.98E-04 |
| 5 | GO:0005853: eukaryotic translation elongation factor 1 complex | 2.51E-04 |
| 6 | GO:0031897: Tic complex | 4.88E-04 |
| 7 | GO:0046658: anchored component of plasma membrane | 6.59E-04 |
| 8 | GO:0009507: chloroplast | 7.07E-04 |
| 9 | GO:0005794: Golgi apparatus | 7.07E-04 |
| 10 | GO:0005618: cell wall | 9.50E-04 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.55E-03 |
| 12 | GO:0016324: apical plasma membrane | 1.92E-03 |
| 13 | GO:0005576: extracellular region | 3.21E-03 |
| 14 | GO:0009941: chloroplast envelope | 4.96E-03 |
| 15 | GO:0005886: plasma membrane | 6.48E-03 |
| 16 | GO:0031969: chloroplast membrane | 7.51E-03 |
| 17 | GO:0010319: stromule | 7.52E-03 |
| 18 | GO:0009570: chloroplast stroma | 8.86E-03 |
| 19 | GO:0000139: Golgi membrane | 1.25E-02 |
| 20 | GO:0005856: cytoskeleton | 1.51E-02 |
| 21 | GO:0005747: mitochondrial respiratory chain complex I | 1.97E-02 |
| 22 | GO:0005773: vacuole | 2.13E-02 |
| 23 | GO:0009706: chloroplast inner membrane | 2.20E-02 |
| 24 | GO:0009534: chloroplast thylakoid | 2.39E-02 |
| 25 | GO:0016021: integral component of membrane | 2.41E-02 |
| 26 | GO:0010287: plastoglobule | 2.49E-02 |
| 27 | GO:0005759: mitochondrial matrix | 3.04E-02 |
| 28 | GO:0005615: extracellular space | 3.52E-02 |
| 29 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.73E-02 |