GO Enrichment Analysis of Co-expressed Genes with
AT1G55490
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 2 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:0042407: cristae formation | 0.00E+00 |
| 4 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 5 | GO:0051246: regulation of protein metabolic process | 0.00E+00 |
| 6 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 7 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 8 | GO:0009658: chloroplast organization | 2.62E-09 |
| 9 | GO:0010020: chloroplast fission | 6.18E-08 |
| 10 | GO:0006418: tRNA aminoacylation for protein translation | 1.74E-07 |
| 11 | GO:0042026: protein refolding | 2.18E-07 |
| 12 | GO:0006458: 'de novo' protein folding | 2.18E-07 |
| 13 | GO:0043572: plastid fission | 4.93E-06 |
| 14 | GO:0061077: chaperone-mediated protein folding | 1.42E-05 |
| 15 | GO:0032544: plastid translation | 7.46E-05 |
| 16 | GO:0006438: valyl-tRNA aminoacylation | 1.02E-04 |
| 17 | GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.02E-04 |
| 18 | GO:0006426: glycyl-tRNA aminoacylation | 1.02E-04 |
| 19 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 2.40E-04 |
| 20 | GO:0006423: cysteinyl-tRNA aminoacylation | 2.40E-04 |
| 21 | GO:0080183: response to photooxidative stress | 2.40E-04 |
| 22 | GO:0071258: cellular response to gravity | 2.40E-04 |
| 23 | GO:2000123: positive regulation of stomatal complex development | 2.40E-04 |
| 24 | GO:0010424: DNA methylation on cytosine within a CG sequence | 2.40E-04 |
| 25 | GO:0043039: tRNA aminoacylation | 2.40E-04 |
| 26 | GO:0009793: embryo development ending in seed dormancy | 3.38E-04 |
| 27 | GO:0007017: microtubule-based process | 3.67E-04 |
| 28 | GO:0007005: mitochondrion organization | 4.41E-04 |
| 29 | GO:0010239: chloroplast mRNA processing | 5.73E-04 |
| 30 | GO:0006241: CTP biosynthetic process | 5.73E-04 |
| 31 | GO:0006809: nitric oxide biosynthetic process | 5.73E-04 |
| 32 | GO:0006165: nucleoside diphosphate phosphorylation | 5.73E-04 |
| 33 | GO:0006228: UTP biosynthetic process | 5.73E-04 |
| 34 | GO:0006424: glutamyl-tRNA aminoacylation | 5.73E-04 |
| 35 | GO:0006183: GTP biosynthetic process | 7.62E-04 |
| 36 | GO:2000038: regulation of stomatal complex development | 7.62E-04 |
| 37 | GO:0009902: chloroplast relocation | 7.62E-04 |
| 38 | GO:0006808: regulation of nitrogen utilization | 7.62E-04 |
| 39 | GO:0051322: anaphase | 7.62E-04 |
| 40 | GO:0009790: embryo development | 8.90E-04 |
| 41 | GO:0010375: stomatal complex patterning | 9.62E-04 |
| 42 | GO:0032543: mitochondrial translation | 9.62E-04 |
| 43 | GO:0010236: plastoquinone biosynthetic process | 9.62E-04 |
| 44 | GO:0010027: thylakoid membrane organization | 1.14E-03 |
| 45 | GO:0006796: phosphate-containing compound metabolic process | 1.17E-03 |
| 46 | GO:0010190: cytochrome b6f complex assembly | 1.17E-03 |
| 47 | GO:0010555: response to mannitol | 1.40E-03 |
| 48 | GO:0009735: response to cytokinin | 1.47E-03 |
| 49 | GO:0006826: iron ion transport | 1.65E-03 |
| 50 | GO:0006880: intracellular sequestering of iron ion | 1.65E-03 |
| 51 | GO:0045995: regulation of embryonic development | 1.65E-03 |
| 52 | GO:0006955: immune response | 1.65E-03 |
| 53 | GO:0048528: post-embryonic root development | 1.65E-03 |
| 54 | GO:0009642: response to light intensity | 1.90E-03 |
| 55 | GO:0000105: histidine biosynthetic process | 1.90E-03 |
| 56 | GO:0048564: photosystem I assembly | 1.90E-03 |
| 57 | GO:0009657: plastid organization | 2.17E-03 |
| 58 | GO:0048366: leaf development | 2.32E-03 |
| 59 | GO:0006457: protein folding | 2.49E-03 |
| 60 | GO:0043067: regulation of programmed cell death | 2.74E-03 |
| 61 | GO:0006349: regulation of gene expression by genetic imprinting | 2.74E-03 |
| 62 | GO:0015979: photosynthesis | 2.92E-03 |
| 63 | GO:0009773: photosynthetic electron transport in photosystem I | 3.36E-03 |
| 64 | GO:0006415: translational termination | 3.36E-03 |
| 65 | GO:0019684: photosynthesis, light reaction | 3.36E-03 |
| 66 | GO:0006879: cellular iron ion homeostasis | 3.36E-03 |
| 67 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.36E-03 |
| 68 | GO:0010216: maintenance of DNA methylation | 3.36E-03 |
| 69 | GO:0045037: protein import into chloroplast stroma | 3.69E-03 |
| 70 | GO:0009767: photosynthetic electron transport chain | 4.02E-03 |
| 71 | GO:0010039: response to iron ion | 4.72E-03 |
| 72 | GO:0019344: cysteine biosynthetic process | 5.46E-03 |
| 73 | GO:0016998: cell wall macromolecule catabolic process | 6.24E-03 |
| 74 | GO:0009294: DNA mediated transformation | 7.06E-03 |
| 75 | GO:0009411: response to UV | 7.06E-03 |
| 76 | GO:0006284: base-excision repair | 7.48E-03 |
| 77 | GO:0016117: carotenoid biosynthetic process | 7.91E-03 |
| 78 | GO:0000226: microtubule cytoskeleton organization | 8.35E-03 |
| 79 | GO:0000413: protein peptidyl-prolyl isomerization | 8.35E-03 |
| 80 | GO:0010197: polar nucleus fusion | 8.80E-03 |
| 81 | GO:0007018: microtubule-based movement | 9.26E-03 |
| 82 | GO:0055072: iron ion homeostasis | 9.73E-03 |
| 83 | GO:0010193: response to ozone | 1.02E-02 |
| 84 | GO:0000302: response to reactive oxygen species | 1.02E-02 |
| 85 | GO:0010286: heat acclimation | 1.22E-02 |
| 86 | GO:0007267: cell-cell signaling | 1.22E-02 |
| 87 | GO:0000910: cytokinesis | 1.27E-02 |
| 88 | GO:0006414: translational elongation | 1.39E-02 |
| 89 | GO:0016311: dephosphorylation | 1.54E-02 |
| 90 | GO:0048481: plant ovule development | 1.60E-02 |
| 91 | GO:0009910: negative regulation of flower development | 1.77E-02 |
| 92 | GO:0009637: response to blue light | 1.89E-02 |
| 93 | GO:0006412: translation | 1.99E-02 |
| 94 | GO:0042542: response to hydrogen peroxide | 2.20E-02 |
| 95 | GO:0008283: cell proliferation | 2.26E-02 |
| 96 | GO:0042538: hyperosmotic salinity response | 2.66E-02 |
| 97 | GO:0009585: red, far-red light phototransduction | 2.80E-02 |
| 98 | GO:0006810: transport | 3.31E-02 |
| 99 | GO:0016569: covalent chromatin modification | 3.44E-02 |
| 100 | GO:0009908: flower development | 3.56E-02 |
| 101 | GO:0046686: response to cadmium ion | 3.56E-02 |
| 102 | GO:0009624: response to nematode | 3.59E-02 |
| 103 | GO:0006633: fatty acid biosynthetic process | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004635: phosphoribosyl-AMP cyclohydrolase activity | 0.00E+00 |
| 2 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 3 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 4 | GO:0004636: phosphoribosyl-ATP diphosphatase activity | 0.00E+00 |
| 5 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 6 | GO:0004812: aminoacyl-tRNA ligase activity | 4.88E-07 |
| 7 | GO:0044183: protein binding involved in protein folding | 2.82E-06 |
| 8 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.02E-04 |
| 9 | GO:0042834: peptidoglycan binding | 1.02E-04 |
| 10 | GO:0004831: tyrosine-tRNA ligase activity | 1.02E-04 |
| 11 | GO:0004832: valine-tRNA ligase activity | 1.02E-04 |
| 12 | GO:0004820: glycine-tRNA ligase activity | 1.02E-04 |
| 13 | GO:0004312: fatty acid synthase activity | 2.40E-04 |
| 14 | GO:0004817: cysteine-tRNA ligase activity | 2.40E-04 |
| 15 | GO:0005198: structural molecule activity | 2.78E-04 |
| 16 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.92E-04 |
| 17 | GO:0017150: tRNA dihydrouridine synthase activity | 3.99E-04 |
| 18 | GO:0002161: aminoacyl-tRNA editing activity | 3.99E-04 |
| 19 | GO:0030267: glyoxylate reductase (NADP) activity | 3.99E-04 |
| 20 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 3.99E-04 |
| 21 | GO:0051082: unfolded protein binding | 5.54E-04 |
| 22 | GO:0016149: translation release factor activity, codon specific | 5.73E-04 |
| 23 | GO:0008199: ferric iron binding | 5.73E-04 |
| 24 | GO:0004550: nucleoside diphosphate kinase activity | 5.73E-04 |
| 25 | GO:0004322: ferroxidase activity | 5.73E-04 |
| 26 | GO:0004045: aminoacyl-tRNA hydrolase activity | 7.62E-04 |
| 27 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 7.62E-04 |
| 28 | GO:0008725: DNA-3-methyladenine glycosylase activity | 9.62E-04 |
| 29 | GO:0003735: structural constituent of ribosome | 9.80E-04 |
| 30 | GO:0016462: pyrophosphatase activity | 1.17E-03 |
| 31 | GO:0080030: methyl indole-3-acetate esterase activity | 1.17E-03 |
| 32 | GO:0005524: ATP binding | 1.18E-03 |
| 33 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.40E-03 |
| 34 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 1.40E-03 |
| 35 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.40E-03 |
| 36 | GO:0004427: inorganic diphosphatase activity | 1.65E-03 |
| 37 | GO:0016831: carboxy-lyase activity | 1.65E-03 |
| 38 | GO:0003746: translation elongation factor activity | 1.85E-03 |
| 39 | GO:0003747: translation release factor activity | 2.45E-03 |
| 40 | GO:0000049: tRNA binding | 3.69E-03 |
| 41 | GO:0003924: GTPase activity | 4.05E-03 |
| 42 | GO:0005528: FK506 binding | 5.46E-03 |
| 43 | GO:0019843: rRNA binding | 5.66E-03 |
| 44 | GO:0004176: ATP-dependent peptidase activity | 6.24E-03 |
| 45 | GO:0016887: ATPase activity | 7.05E-03 |
| 46 | GO:0008017: microtubule binding | 8.17E-03 |
| 47 | GO:0003729: mRNA binding | 8.97E-03 |
| 48 | GO:0019901: protein kinase binding | 9.73E-03 |
| 49 | GO:0042802: identical protein binding | 9.93E-03 |
| 50 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.22E-02 |
| 51 | GO:0008237: metallopeptidase activity | 1.22E-02 |
| 52 | GO:0005200: structural constituent of cytoskeleton | 1.22E-02 |
| 53 | GO:0005525: GTP binding | 1.58E-02 |
| 54 | GO:0004222: metalloendopeptidase activity | 1.71E-02 |
| 55 | GO:0030145: manganese ion binding | 1.77E-02 |
| 56 | GO:0003993: acid phosphatase activity | 1.95E-02 |
| 57 | GO:0004722: protein serine/threonine phosphatase activity | 1.98E-02 |
| 58 | GO:0009055: electron carrier activity | 2.38E-02 |
| 59 | GO:0043621: protein self-association | 2.39E-02 |
| 60 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.39E-02 |
| 61 | GO:0003777: microtubule motor activity | 3.01E-02 |
| 62 | GO:0045735: nutrient reservoir activity | 3.15E-02 |
| 63 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.22E-02 |
| 64 | GO:0003779: actin binding | 3.52E-02 |
| 65 | GO:0016740: transferase activity | 4.78E-02 |
| 66 | GO:0008565: protein transporter activity | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.50E-35 |
| 2 | GO:0009570: chloroplast stroma | 1.86E-32 |
| 3 | GO:0009941: chloroplast envelope | 2.02E-14 |
| 4 | GO:0009579: thylakoid | 2.05E-09 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 9.00E-09 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 4.19E-06 |
| 7 | GO:0031977: thylakoid lumen | 1.12E-05 |
| 8 | GO:0009654: photosystem II oxygen evolving complex | 1.21E-05 |
| 9 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.02E-04 |
| 10 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.02E-04 |
| 11 | GO:0030095: chloroplast photosystem II | 2.37E-04 |
| 12 | GO:0005874: microtubule | 3.72E-04 |
| 13 | GO:0009536: plastid | 3.72E-04 |
| 14 | GO:0019898: extrinsic component of membrane | 7.51E-04 |
| 15 | GO:0072686: mitotic spindle | 9.62E-04 |
| 16 | GO:0005840: ribosome | 1.22E-03 |
| 17 | GO:0022626: cytosolic ribosome | 1.57E-03 |
| 18 | GO:0009539: photosystem II reaction center | 2.17E-03 |
| 19 | GO:0045298: tubulin complex | 2.45E-03 |
| 20 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.45E-03 |
| 21 | GO:0000922: spindle pole | 2.45E-03 |
| 22 | GO:0055028: cortical microtubule | 3.05E-03 |
| 23 | GO:0000311: plastid large ribosomal subunit | 3.69E-03 |
| 24 | GO:0009574: preprophase band | 4.02E-03 |
| 25 | GO:0031012: extracellular matrix | 4.02E-03 |
| 26 | GO:0009706: chloroplast inner membrane | 4.52E-03 |
| 27 | GO:0005875: microtubule associated complex | 5.09E-03 |
| 28 | GO:0042651: thylakoid membrane | 5.85E-03 |
| 29 | GO:0009532: plastid stroma | 6.24E-03 |
| 30 | GO:0005871: kinesin complex | 7.91E-03 |
| 31 | GO:0046658: anchored component of plasma membrane | 1.03E-02 |
| 32 | GO:0048046: apoplast | 1.07E-02 |
| 33 | GO:0009534: chloroplast thylakoid | 1.07E-02 |
| 34 | GO:0005819: spindle | 2.01E-02 |
| 35 | GO:0005856: cytoskeleton | 2.46E-02 |
| 36 | GO:0005739: mitochondrion | 2.59E-02 |
| 37 | GO:0005623: cell | 4.30E-02 |
| 38 | GO:0009524: phragmoplast | 4.38E-02 |
| 39 | GO:0005759: mitochondrial matrix | 4.95E-02 |