Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G54920

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043487: regulation of RNA stability0.00E+00
2GO:1902446: regulation of shade avoidance0.00E+00
3GO:0090306: spindle assembly involved in meiosis0.00E+00
4GO:0008361: regulation of cell size9.20E-07
5GO:0006406: mRNA export from nucleus2.01E-06
6GO:0071902: positive regulation of protein serine/threonine kinase activity3.22E-06
7GO:0016197: endosomal transport8.96E-06
8GO:0034398: telomere tethering at nuclear periphery8.96E-06
9GO:0016049: cell growth1.39E-05
10GO:0010506: regulation of autophagy1.68E-05
11GO:0071230: cellular response to amino acid stimulus1.68E-05
12GO:0031929: TOR signaling1.68E-05
13GO:0000288: nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay1.68E-05
14GO:0032940: secretion by cell1.68E-05
15GO:0016567: protein ubiquitination1.91E-05
16GO:0080119: ER body organization2.64E-05
17GO:0048645: animal organ formation2.64E-05
18GO:0000973: posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery2.64E-05
19GO:0007004: telomere maintenance via telomerase2.64E-05
20GO:0045324: late endosome to vacuole transport3.75E-05
21GO:0007029: endoplasmic reticulum organization4.99E-05
22GO:0032876: negative regulation of DNA endoreduplication4.99E-05
23GO:0048232: male gamete generation6.35E-05
24GO:0009267: cellular response to starvation6.35E-05
25GO:0017148: negative regulation of translation7.81E-05
26GO:0030307: positive regulation of cell growth9.36E-05
27GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay1.45E-04
28GO:0048589: developmental growth1.45E-04
29GO:0009737: response to abscisic acid2.05E-04
30GO:0010105: negative regulation of ethylene-activated signaling pathway2.22E-04
31GO:0007030: Golgi organization2.85E-04
32GO:0042023: DNA endoreduplication3.07E-04
33GO:0010187: negative regulation of seed germination3.29E-04
34GO:0010091: trichome branching4.45E-04
35GO:0006606: protein import into nucleus4.93E-04
36GO:0010252: auxin homeostasis6.71E-04
37GO:0006511: ubiquitin-dependent protein catabolic process7.56E-04
38GO:0009788: negative regulation of abscisic acid-activated signaling pathway7.80E-04
39GO:0006888: ER to Golgi vesicle-mediated transport8.35E-04
40GO:0009723: response to ethylene4.00E-03
41GO:0046777: protein autophosphorylation4.40E-03
42GO:0006886: intracellular protein transport4.85E-03
43GO:0009873: ethylene-activated signaling pathway6.54E-03
44GO:0009738: abscisic acid-activated signaling pathway7.97E-03
45GO:0006468: protein phosphorylation8.22E-03
46GO:0006810: transport1.76E-02
47GO:0009793: embryo development ending in seed dormancy2.44E-02
48GO:0006508: proteolysis2.99E-02
49GO:0009651: response to salt stress3.18E-02
50GO:0006952: defense response4.56E-02
RankGO TermAdjusted P value
1GO:0008240: tripeptidyl-peptidase activity0.00E+00
2GO:0004842: ubiquitin-protein transferase activity3.70E-06
3GO:0043021: ribonucleoprotein complex binding8.96E-06
4GO:0070034: telomerase RNA binding8.96E-06
5GO:0005515: protein binding3.02E-05
6GO:0016874: ligase activity5.45E-05
7GO:0042162: telomeric DNA binding9.36E-05
8GO:0017056: structural constituent of nuclear pore1.10E-04
9GO:0030674: protein binding, bridging1.10E-04
10GO:0005487: nucleocytoplasmic transporter activity1.63E-04
11GO:0004713: protein tyrosine kinase activity1.83E-04
12GO:0008139: nuclear localization sequence binding2.43E-04
13GO:0004540: ribonuclease activity3.74E-04
14GO:0005215: transporter activity1.21E-03
15GO:0043621: protein self-association1.28E-03
16GO:0004672: protein kinase activity1.59E-03
17GO:0004674: protein serine/threonine kinase activity5.24E-03
18GO:0000166: nucleotide binding8.16E-03
19GO:0008270: zinc ion binding2.72E-02
RankGO TermAdjusted P value
1GO:0030015: CCR4-NOT core complex3.22E-06
2GO:0005697: telomerase holoenzyme complex8.96E-06
3GO:0000932: P-body1.06E-05
4GO:0044614: nuclear pore cytoplasmic filaments1.68E-05
5GO:0031931: TORC1 complex1.68E-05
6GO:0030127: COPII vesicle coat6.35E-05
7GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane9.36E-05
8GO:0005737: cytoplasm1.07E-04
9GO:0005769: early endosome3.07E-04
10GO:0031965: nuclear membrane5.68E-04
11GO:0005635: nuclear envelope1.55E-03
12GO:0080008: Cul4-RING E3 ubiquitin ligase complex3.86E-03
13GO:0022626: cytosolic ribosome7.91E-03
14GO:0005802: trans-Golgi network1.14E-02
15GO:0000139: Golgi membrane1.66E-02
16GO:0005789: endoplasmic reticulum membrane1.81E-02
17GO:0005774: vacuolar membrane3.25E-02
18GO:0005773: vacuole4.42E-02
Gene type



Gene DE type