GO Enrichment Analysis of Co-expressed Genes with
AT1G53560
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 2 | GO:0009773: photosynthetic electron transport in photosystem I | 4.49E-09 |
| 3 | GO:0006810: transport | 1.08E-06 |
| 4 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.91E-06 |
| 5 | GO:1902458: positive regulation of stomatal opening | 5.94E-05 |
| 6 | GO:0034337: RNA folding | 5.94E-05 |
| 7 | GO:0046520: sphingoid biosynthetic process | 5.94E-05 |
| 8 | GO:1904966: positive regulation of vitamin E biosynthetic process | 5.94E-05 |
| 9 | GO:0000481: maturation of 5S rRNA | 5.94E-05 |
| 10 | GO:1904964: positive regulation of phytol biosynthetic process | 5.94E-05 |
| 11 | GO:0006833: water transport | 1.41E-04 |
| 12 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.44E-04 |
| 13 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.44E-04 |
| 14 | GO:0010115: regulation of abscisic acid biosynthetic process | 1.44E-04 |
| 15 | GO:0097054: L-glutamate biosynthetic process | 1.44E-04 |
| 16 | GO:0015979: photosynthesis | 1.47E-04 |
| 17 | GO:0034220: ion transmembrane transport | 3.00E-04 |
| 18 | GO:0010182: sugar mediated signaling pathway | 3.24E-04 |
| 19 | GO:0006241: CTP biosynthetic process | 3.57E-04 |
| 20 | GO:0080170: hydrogen peroxide transmembrane transport | 3.57E-04 |
| 21 | GO:0006165: nucleoside diphosphate phosphorylation | 3.57E-04 |
| 22 | GO:0006228: UTP biosynthetic process | 3.57E-04 |
| 23 | GO:0006537: glutamate biosynthetic process | 3.57E-04 |
| 24 | GO:0019676: ammonia assimilation cycle | 4.78E-04 |
| 25 | GO:0015976: carbon utilization | 4.78E-04 |
| 26 | GO:0009765: photosynthesis, light harvesting | 4.78E-04 |
| 27 | GO:0006183: GTP biosynthetic process | 4.78E-04 |
| 28 | GO:2000122: negative regulation of stomatal complex development | 4.78E-04 |
| 29 | GO:0010037: response to carbon dioxide | 4.78E-04 |
| 30 | GO:0006461: protein complex assembly | 6.05E-04 |
| 31 | GO:0045038: protein import into chloroplast thylakoid membrane | 6.05E-04 |
| 32 | GO:0000741: karyogamy | 7.40E-04 |
| 33 | GO:0018298: protein-chromophore linkage | 7.40E-04 |
| 34 | GO:0006561: proline biosynthetic process | 7.40E-04 |
| 35 | GO:0055085: transmembrane transport | 8.06E-04 |
| 36 | GO:0010444: guard mother cell differentiation | 1.03E-03 |
| 37 | GO:0009231: riboflavin biosynthetic process | 1.18E-03 |
| 38 | GO:0009744: response to sucrose | 1.18E-03 |
| 39 | GO:0046620: regulation of organ growth | 1.18E-03 |
| 40 | GO:0032508: DNA duplex unwinding | 1.18E-03 |
| 41 | GO:2000070: regulation of response to water deprivation | 1.18E-03 |
| 42 | GO:0015996: chlorophyll catabolic process | 1.35E-03 |
| 43 | GO:0007186: G-protein coupled receptor signaling pathway | 1.35E-03 |
| 44 | GO:0009657: plastid organization | 1.35E-03 |
| 45 | GO:0010205: photoinhibition | 1.69E-03 |
| 46 | GO:0009638: phototropism | 1.69E-03 |
| 47 | GO:0009688: abscisic acid biosynthetic process | 1.88E-03 |
| 48 | GO:0043085: positive regulation of catalytic activity | 2.07E-03 |
| 49 | GO:0009750: response to fructose | 2.07E-03 |
| 50 | GO:0045037: protein import into chloroplast stroma | 2.27E-03 |
| 51 | GO:0009725: response to hormone | 2.47E-03 |
| 52 | GO:0010207: photosystem II assembly | 2.68E-03 |
| 53 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.11E-03 |
| 54 | GO:0005992: trehalose biosynthetic process | 3.34E-03 |
| 55 | GO:0006487: protein N-linked glycosylation | 3.34E-03 |
| 56 | GO:0006338: chromatin remodeling | 3.34E-03 |
| 57 | GO:0031408: oxylipin biosynthetic process | 3.81E-03 |
| 58 | GO:0042127: regulation of cell proliferation | 4.55E-03 |
| 59 | GO:0006662: glycerol ether metabolic process | 5.34E-03 |
| 60 | GO:0010197: polar nucleus fusion | 5.34E-03 |
| 61 | GO:0042254: ribosome biogenesis | 5.98E-03 |
| 62 | GO:0055114: oxidation-reduction process | 7.01E-03 |
| 63 | GO:0009414: response to water deprivation | 7.91E-03 |
| 64 | GO:0010027: thylakoid membrane organization | 7.97E-03 |
| 65 | GO:0042128: nitrate assimilation | 8.60E-03 |
| 66 | GO:0010411: xyloglucan metabolic process | 8.92E-03 |
| 67 | GO:0009407: toxin catabolic process | 1.03E-02 |
| 68 | GO:0010119: regulation of stomatal movement | 1.06E-02 |
| 69 | GO:0009853: photorespiration | 1.13E-02 |
| 70 | GO:0034599: cellular response to oxidative stress | 1.17E-02 |
| 71 | GO:0009926: auxin polar transport | 1.35E-02 |
| 72 | GO:0009640: photomorphogenesis | 1.35E-02 |
| 73 | GO:0042546: cell wall biogenesis | 1.39E-02 |
| 74 | GO:0009644: response to high light intensity | 1.43E-02 |
| 75 | GO:0009636: response to toxic substance | 1.47E-02 |
| 76 | GO:0006855: drug transmembrane transport | 1.51E-02 |
| 77 | GO:0009585: red, far-red light phototransduction | 1.67E-02 |
| 78 | GO:0006857: oligopeptide transport | 1.76E-02 |
| 79 | GO:0009416: response to light stimulus | 1.91E-02 |
| 80 | GO:0048316: seed development | 1.93E-02 |
| 81 | GO:0051726: regulation of cell cycle | 2.24E-02 |
| 82 | GO:0007623: circadian rhythm | 3.17E-02 |
| 83 | GO:0071555: cell wall organization | 3.86E-02 |
| 84 | GO:0006979: response to oxidative stress | 3.89E-02 |
| 85 | GO:0009658: chloroplast organization | 4.33E-02 |
| 86 | GO:0007049: cell cycle | 4.68E-02 |
| 87 | GO:0048366: leaf development | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 2 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 3 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.69E-06 |
| 4 | GO:0000170: sphingosine hydroxylase activity | 5.94E-05 |
| 5 | GO:0016041: glutamate synthase (ferredoxin) activity | 5.94E-05 |
| 6 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 1.44E-04 |
| 7 | GO:0042284: sphingolipid delta-4 desaturase activity | 1.44E-04 |
| 8 | GO:0022891: substrate-specific transmembrane transporter activity | 2.34E-04 |
| 9 | GO:0003935: GTP cyclohydrolase II activity | 2.46E-04 |
| 10 | GO:0001872: (1->3)-beta-D-glucan binding | 3.57E-04 |
| 11 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 3.57E-04 |
| 12 | GO:0004550: nucleoside diphosphate kinase activity | 3.57E-04 |
| 13 | GO:0048038: quinone binding | 4.00E-04 |
| 14 | GO:0043495: protein anchor | 4.78E-04 |
| 15 | GO:0015250: water channel activity | 5.73E-04 |
| 16 | GO:0016168: chlorophyll binding | 6.05E-04 |
| 17 | GO:0051538: 3 iron, 4 sulfur cluster binding | 6.05E-04 |
| 18 | GO:0019899: enzyme binding | 1.03E-03 |
| 19 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.35E-03 |
| 20 | GO:0008047: enzyme activator activity | 1.88E-03 |
| 21 | GO:0004805: trehalose-phosphatase activity | 1.88E-03 |
| 22 | GO:0015386: potassium:proton antiporter activity | 2.07E-03 |
| 23 | GO:0016491: oxidoreductase activity | 2.46E-03 |
| 24 | GO:0004089: carbonate dehydratase activity | 2.47E-03 |
| 25 | GO:0008081: phosphoric diester hydrolase activity | 2.47E-03 |
| 26 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.47E-03 |
| 27 | GO:0005528: FK506 binding | 3.34E-03 |
| 28 | GO:0043424: protein histidine kinase binding | 3.57E-03 |
| 29 | GO:0015079: potassium ion transmembrane transporter activity | 3.57E-03 |
| 30 | GO:0047134: protein-disulfide reductase activity | 4.81E-03 |
| 31 | GO:0004791: thioredoxin-disulfide reductase activity | 5.61E-03 |
| 32 | GO:0004872: receptor activity | 5.89E-03 |
| 33 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 6.17E-03 |
| 34 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.75E-03 |
| 35 | GO:0008375: acetylglucosaminyltransferase activity | 8.60E-03 |
| 36 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 8.92E-03 |
| 37 | GO:0030247: polysaccharide binding | 8.92E-03 |
| 38 | GO:0004871: signal transducer activity | 9.11E-03 |
| 39 | GO:0005215: transporter activity | 9.26E-03 |
| 40 | GO:0015238: drug transmembrane transporter activity | 9.93E-03 |
| 41 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.03E-02 |
| 42 | GO:0004364: glutathione transferase activity | 1.32E-02 |
| 43 | GO:0015293: symporter activity | 1.47E-02 |
| 44 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.51E-02 |
| 45 | GO:0031625: ubiquitin protein ligase binding | 1.80E-02 |
| 46 | GO:0003735: structural constituent of ribosome | 1.95E-02 |
| 47 | GO:0015035: protein disulfide oxidoreductase activity | 2.19E-02 |
| 48 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.52E-02 |
| 49 | GO:0019843: rRNA binding | 2.52E-02 |
| 50 | GO:0015297: antiporter activity | 3.07E-02 |
| 51 | GO:0042802: identical protein binding | 3.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009535: chloroplast thylakoid membrane | 1.31E-14 |
| 2 | GO:0009507: chloroplast | 6.43E-14 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.00E-12 |
| 4 | GO:0009941: chloroplast envelope | 8.79E-06 |
| 5 | GO:0009523: photosystem II | 1.27E-05 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 1.83E-05 |
| 7 | GO:0030095: chloroplast photosystem II | 1.10E-04 |
| 8 | GO:0042651: thylakoid membrane | 1.75E-04 |
| 9 | GO:0009528: plastid inner membrane | 2.46E-04 |
| 10 | GO:0009527: plastid outer membrane | 4.78E-04 |
| 11 | GO:0031011: Ino80 complex | 6.05E-04 |
| 12 | GO:0009570: chloroplast stroma | 6.63E-04 |
| 13 | GO:0009579: thylakoid | 7.37E-04 |
| 14 | GO:0009534: chloroplast thylakoid | 7.49E-04 |
| 15 | GO:0031969: chloroplast membrane | 9.98E-04 |
| 16 | GO:0009533: chloroplast stromal thylakoid | 1.03E-03 |
| 17 | GO:0016021: integral component of membrane | 1.34E-03 |
| 18 | GO:0032040: small-subunit processome | 2.27E-03 |
| 19 | GO:0048046: apoplast | 2.98E-03 |
| 20 | GO:0005758: mitochondrial intermembrane space | 3.34E-03 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 3.57E-03 |
| 22 | GO:0009532: plastid stroma | 3.81E-03 |
| 23 | GO:0046658: anchored component of plasma membrane | 5.02E-03 |
| 24 | GO:0019898: extrinsic component of membrane | 5.89E-03 |
| 25 | GO:0010319: stromule | 7.35E-03 |
| 26 | GO:0005840: ribosome | 8.65E-03 |
| 27 | GO:0009707: chloroplast outer membrane | 9.59E-03 |
| 28 | GO:0015934: large ribosomal subunit | 1.06E-02 |
| 29 | GO:0031977: thylakoid lumen | 1.28E-02 |
| 30 | GO:0005887: integral component of plasma membrane | 1.46E-02 |
| 31 | GO:0005886: plasma membrane | 2.31E-02 |
| 32 | GO:0016020: membrane | 2.49E-02 |
| 33 | GO:0009506: plasmodesma | 2.77E-02 |
| 34 | GO:0005759: mitochondrial matrix | 2.97E-02 |
| 35 | GO:0031225: anchored component of membrane | 2.98E-02 |
| 36 | GO:0005618: cell wall | 4.59E-02 |