Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G53100

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0030644: cellular chloride ion homeostasis0.00E+00
2GO:1903428: positive regulation of reactive oxygen species biosynthetic process0.00E+00
3GO:0012502: induction of programmed cell death0.00E+00
4GO:0009768: photosynthesis, light harvesting in photosystem I2.18E-11
5GO:0009644: response to high light intensity7.16E-09
6GO:0009645: response to low light intensity stimulus2.11E-08
7GO:0018298: protein-chromophore linkage1.47E-07
8GO:0010218: response to far red light1.84E-07
9GO:0010114: response to red light4.53E-07
10GO:0009409: response to cold5.62E-07
11GO:0080065: 4-alpha-methyl-delta7-sterol oxidation3.12E-05
12GO:0015979: photosynthesis3.14E-05
13GO:1902884: positive regulation of response to oxidative stress7.88E-05
14GO:0006883: cellular sodium ion homeostasis7.88E-05
15GO:0051170: nuclear import7.88E-05
16GO:1901562: response to paraquat1.37E-04
17GO:1901657: glycosyl compound metabolic process1.98E-04
18GO:0031936: negative regulation of chromatin silencing2.04E-04
19GO:1901002: positive regulation of response to salt stress2.76E-04
20GO:0030104: water homeostasis2.76E-04
21GO:0009765: photosynthesis, light harvesting2.76E-04
22GO:0010600: regulation of auxin biosynthetic process2.76E-04
23GO:0010508: positive regulation of autophagy2.76E-04
24GO:0009637: response to blue light4.20E-04
25GO:1900425: negative regulation of defense response to bacterium4.34E-04
26GO:0010244: response to low fluence blue light stimulus by blue low-fluence system5.20E-04
27GO:0051707: response to other organism5.38E-04
28GO:0009408: response to heat5.78E-04
29GO:0010161: red light signaling pathway6.07E-04
30GO:0010196: nonphotochemical quenching6.07E-04
31GO:0080111: DNA demethylation6.07E-04
32GO:0009769: photosynthesis, light harvesting in photosystem II6.07E-04
33GO:0042538: hyperosmotic salinity response6.69E-04
34GO:0009704: de-etiolation6.99E-04
35GO:0010928: regulation of auxin mediated signaling pathway6.99E-04
36GO:0090333: regulation of stomatal closure8.92E-04
37GO:0009735: response to cytokinin1.05E-03
38GO:0009416: response to light stimulus1.17E-03
39GO:0016925: protein sumoylation1.31E-03
40GO:0050826: response to freezing1.43E-03
41GO:0009767: photosynthetic electron transport chain1.43E-03
42GO:0010207: photosystem II assembly1.55E-03
43GO:0016575: histone deacetylation2.05E-03
44GO:0048511: rhythmic process2.19E-03
45GO:0010431: seed maturation2.19E-03
46GO:0061077: chaperone-mediated protein folding2.19E-03
47GO:0009269: response to desiccation2.19E-03
48GO:0010017: red or far-red light signaling pathway2.32E-03
49GO:0071215: cellular response to abscisic acid stimulus2.46E-03
50GO:0008284: positive regulation of cell proliferation2.75E-03
51GO:0009414: response to water deprivation2.75E-03
52GO:0006814: sodium ion transport3.20E-03
53GO:0010200: response to chitin3.31E-03
54GO:0006914: autophagy4.00E-03
55GO:0010286: heat acclimation4.17E-03
56GO:0016579: protein deubiquitination4.34E-03
57GO:0016126: sterol biosynthetic process4.52E-03
58GO:0006629: lipid metabolic process4.70E-03
59GO:0009817: defense response to fungus, incompatible interaction5.42E-03
60GO:0000160: phosphorelay signal transduction system5.60E-03
61GO:0007568: aging5.99E-03
62GO:0009631: cold acclimation5.99E-03
63GO:0042542: response to hydrogen peroxide7.39E-03
64GO:0009640: photomorphogenesis7.60E-03
65GO:0008643: carbohydrate transport8.03E-03
66GO:0009585: red, far-red light phototransduction9.36E-03
67GO:0043086: negative regulation of catalytic activity1.05E-02
68GO:0006457: protein folding1.08E-02
69GO:0009624: response to nematode1.20E-02
70GO:0007623: circadian rhythm1.77E-02
71GO:0010228: vegetative to reproductive phase transition of meristem1.82E-02
72GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.91E-02
73GO:0045944: positive regulation of transcription from RNA polymerase II promoter2.28E-02
74GO:0005975: carbohydrate metabolic process2.57E-02
75GO:0007049: cell cycle2.61E-02
76GO:0046686: response to cadmium ion2.64E-02
77GO:0080167: response to karrikin2.81E-02
78GO:0045892: negative regulation of transcription, DNA-templated3.23E-02
RankGO TermAdjusted P value
1GO:0080082: esculin beta-glucosidase activity0.00E+00
2GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
3GO:0047668: amygdalin beta-glucosidase activity0.00E+00
4GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
5GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
6GO:0004567: beta-mannosidase activity0.00E+00
7GO:0031409: pigment binding3.00E-09
8GO:0016168: chlorophyll binding9.04E-08
9GO:0080079: cellobiose glucosidase activity3.12E-05
10GO:0019948: SUMO activating enzyme activity1.37E-04
11GO:0000254: C-4 methylsterol oxidase activity2.04E-04
12GO:0016787: hydrolase activity2.59E-04
13GO:0102483: scopolin beta-glucosidase activity3.00E-04
14GO:0008422: beta-glucosidase activity4.58E-04
15GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)7.94E-04
16GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity8.92E-04
17GO:0044183: protein binding involved in protein folding1.20E-03
18GO:0047372: acylglycerol lipase activity1.20E-03
19GO:0046872: metal ion binding1.35E-03
20GO:0005315: inorganic phosphate transmembrane transporter activity1.43E-03
21GO:0004407: histone deacetylase activity1.92E-03
22GO:0051087: chaperone binding2.05E-03
23GO:0036459: thiol-dependent ubiquitinyl hydrolase activity2.19E-03
24GO:0008514: organic anion transmembrane transporter activity2.61E-03
25GO:0005515: protein binding2.75E-03
26GO:0004843: thiol-dependent ubiquitin-specific protease activity3.51E-03
27GO:0000156: phosphorelay response regulator activity3.84E-03
28GO:0003993: acid phosphatase activity6.58E-03
29GO:0042393: histone binding6.98E-03
30GO:0015293: symporter activity8.24E-03
31GO:0045735: nutrient reservoir activity1.05E-02
32GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.10E-02
33GO:0022857: transmembrane transporter activity1.15E-02
34GO:0015144: carbohydrate transmembrane transporter activity1.60E-02
35GO:0046910: pectinesterase inhibitor activity1.68E-02
36GO:0015297: antiporter activity1.71E-02
37GO:0005351: sugar:proton symporter activity1.74E-02
38GO:0003682: chromatin binding2.51E-02
39GO:0061630: ubiquitin protein ligase activity2.91E-02
40GO:0004519: endonuclease activity3.93E-02
RankGO TermAdjusted P value
1GO:0009522: photosystem I1.55E-10
2GO:0030076: light-harvesting complex2.29E-09
3GO:0009941: chloroplast envelope2.45E-07
4GO:0009579: thylakoid8.12E-07
5GO:0009534: chloroplast thylakoid8.37E-07
6GO:0009517: PSII associated light-harvesting complex II1.24E-06
7GO:0010287: plastoglobule2.82E-06
8GO:0009535: chloroplast thylakoid membrane3.07E-06
9GO:0009783: photosystem II antenna complex3.12E-05
10GO:0009523: photosystem II1.60E-04
11GO:0009898: cytoplasmic side of plasma membrane2.76E-04
12GO:0009533: chloroplast stromal thylakoid6.07E-04
13GO:0042651: thylakoid membrane2.05E-03
14GO:0005667: transcription factor complex4.87E-03
15GO:0005777: peroxisome9.56E-03
16GO:0009507: chloroplast1.15E-02
17GO:0031225: anchored component of membrane1.30E-02
18GO:0005623: cell1.43E-02
19GO:0016021: integral component of membrane1.54E-02
20GO:0009506: plasmodesma2.25E-02
21GO:0016020: membrane2.64E-02
22GO:0031969: chloroplast membrane2.81E-02
Gene type



Gene DE type