GO Enrichment Analysis of Co-expressed Genes with
AT1G52230
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 0.00E+00 |
| 2 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 3 | GO:0015995: chlorophyll biosynthetic process | 2.59E-18 |
| 4 | GO:0015979: photosynthesis | 2.63E-17 |
| 5 | GO:0006782: protoporphyrinogen IX biosynthetic process | 7.42E-09 |
| 6 | GO:0006783: heme biosynthetic process | 6.27E-07 |
| 7 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.72E-06 |
| 8 | GO:0042549: photosystem II stabilization | 1.54E-05 |
| 9 | GO:0006779: porphyrin-containing compound biosynthetic process | 7.61E-05 |
| 10 | GO:0006824: cobalt ion transport | 7.90E-05 |
| 11 | GO:0019684: photosynthesis, light reaction | 1.08E-04 |
| 12 | GO:0016122: xanthophyll metabolic process | 1.89E-04 |
| 13 | GO:0034755: iron ion transmembrane transport | 1.89E-04 |
| 14 | GO:0035304: regulation of protein dephosphorylation | 1.89E-04 |
| 15 | GO:0090391: granum assembly | 3.17E-04 |
| 16 | GO:0009647: skotomorphogenesis | 4.58E-04 |
| 17 | GO:0050482: arachidonic acid secretion | 4.58E-04 |
| 18 | GO:0009765: photosynthesis, light harvesting | 6.09E-04 |
| 19 | GO:0030007: cellular potassium ion homeostasis | 6.09E-04 |
| 20 | GO:0042938: dipeptide transport | 6.09E-04 |
| 21 | GO:0006656: phosphatidylcholine biosynthetic process | 7.72E-04 |
| 22 | GO:0010117: photoprotection | 7.72E-04 |
| 23 | GO:0010190: cytochrome b6f complex assembly | 9.42E-04 |
| 24 | GO:0018298: protein-chromophore linkage | 1.06E-03 |
| 25 | GO:0071470: cellular response to osmotic stress | 1.12E-03 |
| 26 | GO:0009942: longitudinal axis specification | 1.12E-03 |
| 27 | GO:0010189: vitamin E biosynthetic process | 1.12E-03 |
| 28 | GO:0010196: nonphotochemical quenching | 1.31E-03 |
| 29 | GO:0009769: photosynthesis, light harvesting in photosystem II | 1.31E-03 |
| 30 | GO:0050829: defense response to Gram-negative bacterium | 1.31E-03 |
| 31 | GO:0009645: response to low light intensity stimulus | 1.31E-03 |
| 32 | GO:0034599: cellular response to oxidative stress | 1.38E-03 |
| 33 | GO:0006644: phospholipid metabolic process | 1.51E-03 |
| 34 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.51E-03 |
| 35 | GO:0009642: response to light intensity | 1.51E-03 |
| 36 | GO:0006353: DNA-templated transcription, termination | 1.51E-03 |
| 37 | GO:0007389: pattern specification process | 1.72E-03 |
| 38 | GO:0034765: regulation of ion transmembrane transport | 1.95E-03 |
| 39 | GO:0010205: photoinhibition | 2.18E-03 |
| 40 | GO:0006949: syncytium formation | 2.41E-03 |
| 41 | GO:0009688: abscisic acid biosynthetic process | 2.41E-03 |
| 42 | GO:0030148: sphingolipid biosynthetic process | 2.66E-03 |
| 43 | GO:0009773: photosynthetic electron transport in photosystem I | 2.66E-03 |
| 44 | GO:0043085: positive regulation of catalytic activity | 2.66E-03 |
| 45 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.66E-03 |
| 46 | GO:0055114: oxidation-reduction process | 2.72E-03 |
| 47 | GO:0015706: nitrate transport | 2.92E-03 |
| 48 | GO:0009767: photosynthetic electron transport chain | 3.18E-03 |
| 49 | GO:0010207: photosystem II assembly | 3.45E-03 |
| 50 | GO:0007017: microtubule-based process | 4.61E-03 |
| 51 | GO:0051260: protein homooligomerization | 4.92E-03 |
| 52 | GO:0009269: response to desiccation | 4.92E-03 |
| 53 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 5.56E-03 |
| 54 | GO:0070417: cellular response to cold | 6.22E-03 |
| 55 | GO:0009741: response to brassinosteroid | 6.92E-03 |
| 56 | GO:0006662: glycerol ether metabolic process | 6.92E-03 |
| 57 | GO:0007018: microtubule-based movement | 7.28E-03 |
| 58 | GO:0010193: response to ozone | 8.01E-03 |
| 59 | GO:0010583: response to cyclopentenone | 8.39E-03 |
| 60 | GO:0010252: auxin homeostasis | 9.16E-03 |
| 61 | GO:0009828: plant-type cell wall loosening | 9.16E-03 |
| 62 | GO:0071805: potassium ion transmembrane transport | 9.56E-03 |
| 63 | GO:0009723: response to ethylene | 9.89E-03 |
| 64 | GO:0010029: regulation of seed germination | 1.08E-02 |
| 65 | GO:0045454: cell redox homeostasis | 1.27E-02 |
| 66 | GO:0042742: defense response to bacterium | 1.32E-02 |
| 67 | GO:0010218: response to far red light | 1.34E-02 |
| 68 | GO:0007568: aging | 1.38E-02 |
| 69 | GO:0010119: regulation of stomatal movement | 1.38E-02 |
| 70 | GO:0009637: response to blue light | 1.48E-02 |
| 71 | GO:0009926: auxin polar transport | 1.77E-02 |
| 72 | GO:0009640: photomorphogenesis | 1.77E-02 |
| 73 | GO:0010114: response to red light | 1.77E-02 |
| 74 | GO:0009644: response to high light intensity | 1.87E-02 |
| 75 | GO:0009664: plant-type cell wall organization | 2.08E-02 |
| 76 | GO:0006812: cation transport | 2.08E-02 |
| 77 | GO:0009734: auxin-activated signaling pathway | 2.21E-02 |
| 78 | GO:0010224: response to UV-B | 2.24E-02 |
| 79 | GO:0006857: oligopeptide transport | 2.29E-02 |
| 80 | GO:0043086: negative regulation of catalytic activity | 2.46E-02 |
| 81 | GO:0009735: response to cytokinin | 2.55E-02 |
| 82 | GO:0042545: cell wall modification | 2.75E-02 |
| 83 | GO:0040008: regulation of growth | 4.01E-02 |
| 84 | GO:0045490: pectin catabolic process | 4.14E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015269: calcium-activated potassium channel activity | 0.00E+00 |
| 2 | GO:0004853: uroporphyrinogen decarboxylase activity | 0.00E+00 |
| 3 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 4 | GO:0004418: hydroxymethylbilane synthase activity | 0.00E+00 |
| 5 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 6 | GO:0016630: protochlorophyllide reductase activity | 3.44E-07 |
| 7 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 7.90E-05 |
| 8 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 7.90E-05 |
| 9 | GO:0010242: oxygen evolving activity | 7.90E-05 |
| 10 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 7.90E-05 |
| 11 | GO:0052631: sphingolipid delta-8 desaturase activity | 7.90E-05 |
| 12 | GO:0008266: poly(U) RNA binding | 1.65E-04 |
| 13 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.89E-04 |
| 14 | GO:0019172: glyoxalase III activity | 1.89E-04 |
| 15 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 1.89E-04 |
| 16 | GO:0031409: pigment binding | 2.10E-04 |
| 17 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 3.17E-04 |
| 18 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 4.58E-04 |
| 19 | GO:0016851: magnesium chelatase activity | 4.58E-04 |
| 20 | GO:0042936: dipeptide transporter activity | 6.09E-04 |
| 21 | GO:0004623: phospholipase A2 activity | 7.72E-04 |
| 22 | GO:0016168: chlorophyll binding | 8.67E-04 |
| 23 | GO:0015271: outward rectifier potassium channel activity | 9.42E-04 |
| 24 | GO:0004462: lactoylglutathione lyase activity | 9.42E-04 |
| 25 | GO:0004602: glutathione peroxidase activity | 1.12E-03 |
| 26 | GO:0005267: potassium channel activity | 1.72E-03 |
| 27 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.83E-03 |
| 28 | GO:0005381: iron ion transmembrane transporter activity | 2.18E-03 |
| 29 | GO:0009672: auxin:proton symporter activity | 2.18E-03 |
| 30 | GO:0008047: enzyme activator activity | 2.41E-03 |
| 31 | GO:0005509: calcium ion binding | 2.56E-03 |
| 32 | GO:0010329: auxin efflux transmembrane transporter activity | 3.18E-03 |
| 33 | GO:0015035: protein disulfide oxidoreductase activity | 3.31E-03 |
| 34 | GO:0004190: aspartic-type endopeptidase activity | 3.73E-03 |
| 35 | GO:0005216: ion channel activity | 4.61E-03 |
| 36 | GO:0046910: pectinesterase inhibitor activity | 5.15E-03 |
| 37 | GO:0047134: protein-disulfide reductase activity | 6.22E-03 |
| 38 | GO:0004791: thioredoxin-disulfide reductase activity | 7.28E-03 |
| 39 | GO:0048038: quinone binding | 8.01E-03 |
| 40 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.77E-03 |
| 41 | GO:0005200: structural constituent of cytoskeleton | 9.56E-03 |
| 42 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.21E-02 |
| 43 | GO:0005215: transporter activity | 1.50E-02 |
| 44 | GO:0016491: oxidoreductase activity | 1.87E-02 |
| 45 | GO:0003777: microtubule motor activity | 2.35E-02 |
| 46 | GO:0045330: aspartyl esterase activity | 2.35E-02 |
| 47 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.52E-02 |
| 48 | GO:0016874: ligase activity | 2.69E-02 |
| 49 | GO:0030599: pectinesterase activity | 2.69E-02 |
| 50 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.36E-02 |
| 51 | GO:0004252: serine-type endopeptidase activity | 3.55E-02 |
| 52 | GO:0015297: antiporter activity | 4.01E-02 |
| 53 | GO:0008017: microtubule binding | 4.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 9.51E-28 |
| 3 | GO:0009507: chloroplast | 1.20E-23 |
| 4 | GO:0009534: chloroplast thylakoid | 2.40E-22 |
| 5 | GO:0009941: chloroplast envelope | 7.14E-16 |
| 6 | GO:0009579: thylakoid | 5.48E-13 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 1.27E-09 |
| 8 | GO:0009522: photosystem I | 4.55E-09 |
| 9 | GO:0030095: chloroplast photosystem II | 2.80E-08 |
| 10 | GO:0010287: plastoglobule | 4.34E-08 |
| 11 | GO:0009570: chloroplast stroma | 4.50E-08 |
| 12 | GO:0009538: photosystem I reaction center | 2.97E-07 |
| 13 | GO:0031977: thylakoid lumen | 5.43E-06 |
| 14 | GO:0009517: PSII associated light-harvesting complex II | 6.01E-06 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 6.72E-06 |
| 16 | GO:0019898: extrinsic component of membrane | 2.35E-05 |
| 17 | GO:0009783: photosystem II antenna complex | 7.90E-05 |
| 18 | GO:0030093: chloroplast photosystem I | 1.89E-04 |
| 19 | GO:0010007: magnesium chelatase complex | 3.17E-04 |
| 20 | GO:0042646: plastid nucleoid | 4.58E-04 |
| 21 | GO:0009523: photosystem II | 5.39E-04 |
| 22 | GO:0030660: Golgi-associated vesicle membrane | 6.09E-04 |
| 23 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 6.09E-04 |
| 24 | GO:0055035: plastid thylakoid membrane | 7.72E-04 |
| 25 | GO:0016363: nuclear matrix | 1.12E-03 |
| 26 | GO:0016021: integral component of membrane | 1.23E-03 |
| 27 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.51E-03 |
| 28 | GO:0031969: chloroplast membrane | 1.60E-03 |
| 29 | GO:0045298: tubulin complex | 1.95E-03 |
| 30 | GO:0005765: lysosomal membrane | 2.66E-03 |
| 31 | GO:0009706: chloroplast inner membrane | 3.21E-03 |
| 32 | GO:0030076: light-harvesting complex | 3.73E-03 |
| 33 | GO:0042651: thylakoid membrane | 4.61E-03 |
| 34 | GO:0016020: membrane | 5.17E-03 |
| 35 | GO:0031410: cytoplasmic vesicle | 5.24E-03 |
| 36 | GO:0005871: kinesin complex | 6.22E-03 |
| 37 | GO:0071944: cell periphery | 8.77E-03 |
| 38 | GO:0005874: microtubule | 1.02E-02 |
| 39 | GO:0009707: chloroplast outer membrane | 1.25E-02 |
| 40 | GO:0048046: apoplast | 2.03E-02 |
| 41 | GO:0010008: endosome membrane | 2.52E-02 |
| 42 | GO:0005623: cell | 3.36E-02 |