GO Enrichment Analysis of Co-expressed Genes with
AT1G52160
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0060213: positive regulation of nuclear-transcribed mRNA poly(A) tail shortening | 0.00E+00 |
| 2 | GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic | 3.00E-05 |
| 3 | GO:0043687: post-translational protein modification | 3.00E-05 |
| 4 | GO:0045948: positive regulation of translational initiation | 7.58E-05 |
| 5 | GO:0010501: RNA secondary structure unwinding | 1.20E-04 |
| 6 | GO:0042256: mature ribosome assembly | 1.32E-04 |
| 7 | GO:0044210: 'de novo' CTP biosynthetic process | 1.32E-04 |
| 8 | GO:0016255: attachment of GPI anchor to protein | 1.32E-04 |
| 9 | GO:0015743: malate transport | 2.67E-04 |
| 10 | GO:0000380: alternative mRNA splicing, via spliceosome | 3.42E-04 |
| 11 | GO:0018279: protein N-linked glycosylation via asparagine | 3.42E-04 |
| 12 | GO:0009094: L-phenylalanine biosynthetic process | 5.02E-04 |
| 13 | GO:0009423: chorismate biosynthetic process | 5.02E-04 |
| 14 | GO:0032508: DNA duplex unwinding | 6.76E-04 |
| 15 | GO:0006364: rRNA processing | 6.82E-04 |
| 16 | GO:0060321: acceptance of pollen | 7.68E-04 |
| 17 | GO:0001510: RNA methylation | 7.68E-04 |
| 18 | GO:0006367: transcription initiation from RNA polymerase II promoter | 7.68E-04 |
| 19 | GO:0009553: embryo sac development | 9.27E-04 |
| 20 | GO:0009970: cellular response to sulfate starvation | 1.06E-03 |
| 21 | GO:0006995: cellular response to nitrogen starvation | 1.06E-03 |
| 22 | GO:0009073: aromatic amino acid family biosynthetic process | 1.16E-03 |
| 23 | GO:0000266: mitochondrial fission | 1.27E-03 |
| 24 | GO:2000012: regulation of auxin polar transport | 1.38E-03 |
| 25 | GO:0010102: lateral root morphogenesis | 1.38E-03 |
| 26 | GO:0007623: circadian rhythm | 1.61E-03 |
| 27 | GO:0006406: mRNA export from nucleus | 1.86E-03 |
| 28 | GO:0009561: megagametogenesis | 2.52E-03 |
| 29 | GO:0006970: response to osmotic stress | 2.65E-03 |
| 30 | GO:0009791: post-embryonic development | 3.24E-03 |
| 31 | GO:0019760: glucosinolate metabolic process | 3.87E-03 |
| 32 | GO:0009409: response to cold | 3.90E-03 |
| 33 | GO:0009911: positive regulation of flower development | 4.36E-03 |
| 34 | GO:0046686: response to cadmium ion | 4.65E-03 |
| 35 | GO:0048573: photoperiodism, flowering | 4.88E-03 |
| 36 | GO:0018298: protein-chromophore linkage | 5.23E-03 |
| 37 | GO:0010043: response to zinc ion | 5.78E-03 |
| 38 | GO:0010119: regulation of stomatal movement | 5.78E-03 |
| 39 | GO:0009637: response to blue light | 6.16E-03 |
| 40 | GO:0045087: innate immune response | 6.16E-03 |
| 41 | GO:0006839: mitochondrial transport | 6.74E-03 |
| 42 | GO:0042542: response to hydrogen peroxide | 7.14E-03 |
| 43 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.08E-02 |
| 44 | GO:0016567: protein ubiquitination | 1.09E-02 |
| 45 | GO:0016569: covalent chromatin modification | 1.11E-02 |
| 46 | GO:0042744: hydrogen peroxide catabolic process | 1.49E-02 |
| 47 | GO:0009790: embryo development | 1.51E-02 |
| 48 | GO:0006633: fatty acid biosynthetic process | 1.59E-02 |
| 49 | GO:0016036: cellular response to phosphate starvation | 1.62E-02 |
| 50 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.76E-02 |
| 51 | GO:0010468: regulation of gene expression | 1.93E-02 |
| 52 | GO:0009617: response to bacterium | 1.93E-02 |
| 53 | GO:0080167: response to karrikin | 2.71E-02 |
| 54 | GO:0006886: intracellular protein transport | 3.15E-02 |
| 55 | GO:0009793: embryo development ending in seed dormancy | 3.72E-02 |
| 56 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 4.37E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016428: tRNA (cytosine-5-)-methyltransferase activity | 0.00E+00 |
| 2 | GO:0016274: protein-arginine N-methyltransferase activity | 3.00E-05 |
| 3 | GO:0004839: ubiquitin activating enzyme activity | 7.58E-05 |
| 4 | GO:0003923: GPI-anchor transamidase activity | 7.58E-05 |
| 5 | GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity | 7.58E-05 |
| 6 | GO:0001047: core promoter binding | 7.58E-05 |
| 7 | GO:0004096: catalase activity | 1.32E-04 |
| 8 | GO:0003883: CTP synthase activity | 1.97E-04 |
| 9 | GO:0047769: arogenate dehydratase activity | 2.67E-04 |
| 10 | GO:0004664: prephenate dehydratase activity | 2.67E-04 |
| 11 | GO:0005253: anion channel activity | 2.67E-04 |
| 12 | GO:0004576: oligosaccharyl transferase activity | 2.67E-04 |
| 13 | GO:0008641: small protein activating enzyme activity | 3.42E-04 |
| 14 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.42E-04 |
| 15 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 3.42E-04 |
| 16 | GO:0003697: single-stranded DNA binding | 4.00E-04 |
| 17 | GO:0031369: translation initiation factor binding | 4.20E-04 |
| 18 | GO:0003950: NAD+ ADP-ribosyltransferase activity | 5.02E-04 |
| 19 | GO:0009881: photoreceptor activity | 5.88E-04 |
| 20 | GO:0015140: malate transmembrane transporter activity | 5.88E-04 |
| 21 | GO:0030515: snoRNA binding | 5.88E-04 |
| 22 | GO:0003729: mRNA binding | 7.73E-04 |
| 23 | GO:0003727: single-stranded RNA binding | 2.52E-03 |
| 24 | GO:0016597: amino acid binding | 4.20E-03 |
| 25 | GO:0004004: ATP-dependent RNA helicase activity | 4.88E-03 |
| 26 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 5.23E-03 |
| 27 | GO:0050897: cobalt ion binding | 5.78E-03 |
| 28 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 9.03E-03 |
| 29 | GO:0003690: double-stranded DNA binding | 9.25E-03 |
| 30 | GO:0016874: ligase activity | 1.11E-02 |
| 31 | GO:0008026: ATP-dependent helicase activity | 1.21E-02 |
| 32 | GO:0003676: nucleic acid binding | 1.60E-02 |
| 33 | GO:0003824: catalytic activity | 1.77E-02 |
| 34 | GO:0004842: ubiquitin-protein transferase activity | 2.22E-02 |
| 35 | GO:0008168: methyltransferase activity | 2.26E-02 |
| 36 | GO:0046982: protein heterodimerization activity | 2.29E-02 |
| 37 | GO:0004722: protein serine/threonine phosphatase activity | 3.29E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032777: Piccolo NuA4 histone acetyltransferase complex | 7.58E-05 |
| 2 | GO:0042765: GPI-anchor transamidase complex | 1.32E-04 |
| 3 | GO:0008250: oligosaccharyltransferase complex | 3.42E-04 |
| 4 | GO:0005783: endoplasmic reticulum | 4.47E-04 |
| 5 | GO:0016363: nuclear matrix | 5.02E-04 |
| 6 | GO:0005680: anaphase-promoting complex | 8.63E-04 |
| 7 | GO:0032040: small-subunit processome | 1.27E-03 |
| 8 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.27E-03 |
| 9 | GO:0005777: peroxisome | 1.30E-03 |
| 10 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 2.52E-03 |
| 11 | GO:0000932: P-body | 4.36E-03 |
| 12 | GO:0000786: nucleosome | 5.97E-03 |
| 13 | GO:0090406: pollen tube | 7.34E-03 |
| 14 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.23E-02 |
| 15 | GO:0009705: plant-type vacuole membrane | 1.70E-02 |
| 16 | GO:0046658: anchored component of plasma membrane | 2.08E-02 |
| 17 | GO:0009507: chloroplast | 2.17E-02 |
| 18 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.48E-02 |
| 19 | GO:0005730: nucleolus | 2.72E-02 |
| 20 | GO:0009570: chloroplast stroma | 2.87E-02 |
| 21 | GO:0005829: cytosol | 2.88E-02 |
| 22 | GO:0005743: mitochondrial inner membrane | 3.40E-02 |