Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G51400

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032928: regulation of superoxide anion generation0.00E+00
2GO:0015717: triose phosphate transport0.00E+00
3GO:0009661: chromoplast organization0.00E+00
4GO:1901401: regulation of tetrapyrrole metabolic process0.00E+00
5GO:1901918: negative regulation of exoribonuclease activity0.00E+00
6GO:0046677: response to antibiotic0.00E+00
7GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
8GO:0015979: photosynthesis9.74E-16
9GO:0015995: chlorophyll biosynthetic process4.40E-13
10GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.95E-05
11GO:0006824: cobalt ion transport1.18E-04
12GO:0006782: protoporphyrinogen IX biosynthetic process1.63E-04
13GO:1901679: nucleotide transmembrane transport2.73E-04
14GO:0071497: cellular response to freezing2.73E-04
15GO:0050992: dimethylallyl diphosphate biosynthetic process2.73E-04
16GO:1904143: positive regulation of carotenoid biosynthetic process2.73E-04
17GO:0016122: xanthophyll metabolic process2.73E-04
18GO:0034755: iron ion transmembrane transport2.73E-04
19GO:0009640: photomorphogenesis3.05E-04
20GO:0035436: triose phosphate transmembrane transport4.52E-04
21GO:0080121: AMP transport4.52E-04
22GO:0009647: skotomorphogenesis6.47E-04
23GO:0045454: cell redox homeostasis6.92E-04
24GO:0042938: dipeptide transport8.60E-04
25GO:1901141: regulation of lignin biosynthetic process8.60E-04
26GO:0009765: photosynthesis, light harvesting8.60E-04
27GO:0030007: cellular potassium ion homeostasis8.60E-04
28GO:0015713: phosphoglycerate transport8.60E-04
29GO:0015867: ATP transport8.60E-04
30GO:0010117: photoprotection1.08E-03
31GO:0016120: carotene biosynthetic process1.08E-03
32GO:0006656: phosphatidylcholine biosynthetic process1.08E-03
33GO:0040008: regulation of growth1.30E-03
34GO:0009643: photosynthetic acclimation1.33E-03
35GO:0015866: ADP transport1.33E-03
36GO:0042549: photosystem II stabilization1.33E-03
37GO:0009228: thiamine biosynthetic process1.33E-03
38GO:0035435: phosphate ion transmembrane transport1.33E-03
39GO:0009942: longitudinal axis specification1.59E-03
40GO:0098655: cation transmembrane transport1.59E-03
41GO:0010189: vitamin E biosynthetic process1.59E-03
42GO:0071470: cellular response to osmotic stress1.59E-03
43GO:0009645: response to low light intensity stimulus1.87E-03
44GO:0009769: photosynthesis, light harvesting in photosystem II1.87E-03
45GO:0050829: defense response to Gram-negative bacterium1.87E-03
46GO:0050821: protein stabilization2.16E-03
47GO:0009642: response to light intensity2.16E-03
48GO:0055114: oxidation-reduction process2.20E-03
49GO:0034599: cellular response to oxidative stress2.33E-03
50GO:0007389: pattern specification process2.46E-03
51GO:0009657: plastid organization2.46E-03
52GO:0010206: photosystem II repair2.78E-03
53GO:0034765: regulation of ion transmembrane transport2.78E-03
54GO:0006783: heme biosynthetic process2.78E-03
55GO:0098656: anion transmembrane transport2.78E-03
56GO:0010114: response to red light2.86E-03
57GO:0010205: photoinhibition3.12E-03
58GO:0006779: porphyrin-containing compound biosynthetic process3.12E-03
59GO:0009688: abscisic acid biosynthetic process3.46E-03
60GO:0045036: protein targeting to chloroplast3.46E-03
61GO:0006949: syncytium formation3.46E-03
62GO:0019538: protein metabolic process3.46E-03
63GO:0043085: positive regulation of catalytic activity3.82E-03
64GO:0030148: sphingolipid biosynthetic process3.82E-03
65GO:0009698: phenylpropanoid metabolic process3.82E-03
66GO:0009773: photosynthetic electron transport in photosystem I3.82E-03
67GO:0015706: nitrate transport4.19E-03
68GO:0006094: gluconeogenesis4.57E-03
69GO:0006629: lipid metabolic process5.14E-03
70GO:0034976: response to endoplasmic reticulum stress5.79E-03
71GO:0006289: nucleotide-excision repair6.22E-03
72GO:0009768: photosynthesis, light harvesting in photosystem I6.66E-03
73GO:0007017: microtubule-based process6.66E-03
74GO:0016114: terpenoid biosynthetic process7.11E-03
75GO:0051260: protein homooligomerization7.11E-03
76GO:0009269: response to desiccation7.11E-03
77GO:0009734: auxin-activated signaling pathway7.94E-03
78GO:0009831: plant-type cell wall modification involved in multidimensional cell growth8.05E-03
79GO:0070417: cellular response to cold9.02E-03
80GO:0009735: response to cytokinin9.51E-03
81GO:0006662: glycerol ether metabolic process1.00E-02
82GO:0009741: response to brassinosteroid1.00E-02
83GO:0007018: microtubule-based movement1.06E-02
84GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.16E-02
85GO:0010583: response to cyclopentenone1.22E-02
86GO:0009828: plant-type cell wall loosening1.33E-02
87GO:0010252: auxin homeostasis1.33E-02
88GO:0071805: potassium ion transmembrane transport1.39E-02
89GO:0009826: unidimensional cell growth1.41E-02
90GO:0010029: regulation of seed germination1.57E-02
91GO:0016311: dephosphorylation1.76E-02
92GO:0018298: protein-chromophore linkage1.82E-02
93GO:0010218: response to far red light1.96E-02
94GO:0010119: regulation of stomatal movement2.02E-02
95GO:0007568: aging2.02E-02
96GO:0009631: cold acclimation2.02E-02
97GO:0009637: response to blue light2.16E-02
98GO:0006839: mitochondrial transport2.37E-02
99GO:0006631: fatty acid metabolic process2.44E-02
100GO:0009926: auxin polar transport2.59E-02
101GO:0009644: response to high light intensity2.73E-02
102GO:0006812: cation transport3.04E-02
103GO:0009664: plant-type cell wall organization3.04E-02
104GO:0006857: oligopeptide transport3.36E-02
105GO:0006417: regulation of translation3.44E-02
106GO:0006096: glycolytic process3.60E-02
107GO:0043086: negative regulation of catalytic activity3.60E-02
108GO:0009740: gibberellic acid mediated signaling pathway3.94E-02
109GO:0042545: cell wall modification4.02E-02
110GO:0006396: RNA processing4.19E-02
111GO:0009742: brassinosteroid mediated signaling pathway4.28E-02
112GO:0005975: carbohydrate metabolic process4.35E-02
RankGO TermAdjusted P value
1GO:0045550: geranylgeranyl reductase activity0.00E+00
2GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity0.00E+00
3GO:0015038: glutathione disulfide oxidoreductase activity0.00E+00
4GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity0.00E+00
5GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
6GO:0015269: calcium-activated potassium channel activity0.00E+00
7GO:0004462: lactoylglutathione lyase activity2.95E-05
8GO:0052631: sphingolipid delta-8 desaturase activity1.18E-04
9GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity1.18E-04
10GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor1.18E-04
11GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity1.18E-04
12GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity1.18E-04
13GO:0004853: uroporphyrinogen decarboxylase activity1.18E-04
14GO:0016630: protochlorophyllide reductase activity2.73E-04
15GO:0019172: glyoxalase III activity2.73E-04
16GO:0000234: phosphoethanolamine N-methyltransferase activity2.73E-04
17GO:0016868: intramolecular transferase activity, phosphotransferases2.73E-04
18GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity2.73E-04
19GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity2.73E-04
20GO:0051537: 2 iron, 2 sulfur cluster binding3.38E-04
21GO:0071917: triose-phosphate transmembrane transporter activity4.52E-04
22GO:0010277: chlorophyllide a oxygenase [overall] activity4.52E-04
23GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor6.47E-04
24GO:0016851: magnesium chelatase activity6.47E-04
25GO:0070628: proteasome binding8.60E-04
26GO:0015120: phosphoglycerate transmembrane transporter activity8.60E-04
27GO:0042936: dipeptide transporter activity8.60E-04
28GO:0051538: 3 iron, 4 sulfur cluster binding1.08E-03
29GO:0080122: AMP transmembrane transporter activity1.08E-03
30GO:0031593: polyubiquitin binding1.33E-03
31GO:0015271: outward rectifier potassium channel activity1.33E-03
32GO:0004332: fructose-bisphosphate aldolase activity1.33E-03
33GO:0004602: glutathione peroxidase activity1.59E-03
34GO:0005347: ATP transmembrane transporter activity1.59E-03
35GO:0015217: ADP transmembrane transporter activity1.59E-03
36GO:0005267: potassium channel activity2.46E-03
37GO:0009672: auxin:proton symporter activity3.12E-03
38GO:0005381: iron ion transmembrane transporter activity3.12E-03
39GO:0008047: enzyme activator activity3.46E-03
40GO:0047372: acylglycerol lipase activity3.82E-03
41GO:0004022: alcohol dehydrogenase (NAD) activity4.57E-03
42GO:0015114: phosphate ion transmembrane transporter activity4.57E-03
43GO:0010329: auxin efflux transmembrane transporter activity4.57E-03
44GO:0004190: aspartic-type endopeptidase activity5.37E-03
45GO:0015035: protein disulfide oxidoreductase activity5.62E-03
46GO:0031409: pigment binding5.79E-03
47GO:0043130: ubiquitin binding6.22E-03
48GO:0005216: ion channel activity6.66E-03
49GO:0005215: transporter activity7.63E-03
50GO:0003756: protein disulfide isomerase activity8.53E-03
51GO:0003727: single-stranded RNA binding8.53E-03
52GO:0046910: pectinesterase inhibitor activity8.79E-03
53GO:0015297: antiporter activity9.00E-03
54GO:0047134: protein-disulfide reductase activity9.02E-03
55GO:0004791: thioredoxin-disulfide reductase activity1.06E-02
56GO:0019901: protein kinase binding1.11E-02
57GO:0048038: quinone binding1.16E-02
58GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.28E-02
59GO:0003684: damaged DNA binding1.33E-02
60GO:0005200: structural constituent of cytoskeleton1.39E-02
61GO:0005515: protein binding1.42E-02
62GO:0016168: chlorophyll binding1.57E-02
63GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.76E-02
64GO:0030145: manganese ion binding2.02E-02
65GO:0003993: acid phosphatase activity2.23E-02
66GO:0042393: histone binding2.37E-02
67GO:0004185: serine-type carboxypeptidase activity2.59E-02
68GO:0043621: protein self-association2.73E-02
69GO:0009055: electron carrier activity2.88E-02
70GO:0016298: lipase activity3.28E-02
71GO:0003777: microtubule motor activity3.44E-02
72GO:0045330: aspartyl esterase activity3.44E-02
73GO:0008289: lipid binding3.73E-02
74GO:0016874: ligase activity3.94E-02
75GO:0030599: pectinesterase activity3.94E-02
76GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.91E-02
RankGO TermAdjusted P value
1GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
2GO:0009534: chloroplast thylakoid3.77E-20
3GO:0009535: chloroplast thylakoid membrane4.45E-19
4GO:0009507: chloroplast5.98E-14
5GO:0009538: photosystem I reaction center1.41E-11
6GO:0009941: chloroplast envelope1.80E-11
7GO:0009579: thylakoid5.23E-09
8GO:0010287: plastoglobule2.35E-07
9GO:0009517: PSII associated light-harvesting complex II1.18E-05
10GO:0009570: chloroplast stroma3.71E-05
11GO:0009523: photosystem II5.44E-05
12GO:0031969: chloroplast membrane6.73E-05
13GO:0030093: chloroplast photosystem I2.73E-04
14GO:0016021: integral component of membrane3.14E-04
15GO:0010007: magnesium chelatase complex4.52E-04
16GO:0042646: plastid nucleoid6.47E-04
17GO:0009706: chloroplast inner membrane7.02E-04
18GO:0009522: photosystem I8.40E-04
19GO:0030660: Golgi-associated vesicle membrane8.60E-04
20GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane8.60E-04
21GO:0009543: chloroplast thylakoid lumen9.26E-04
22GO:0016363: nuclear matrix1.59E-03
23GO:0009533: chloroplast stromal thylakoid1.87E-03
24GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane2.16E-03
25GO:0031977: thylakoid lumen2.64E-03
26GO:0045298: tubulin complex2.78E-03
27GO:0005765: lysosomal membrane3.82E-03
28GO:0030095: chloroplast photosystem II4.97E-03
29GO:0030076: light-harvesting complex5.37E-03
30GO:0016020: membrane5.45E-03
31GO:0042651: thylakoid membrane6.66E-03
32GO:0005623: cell7.01E-03
33GO:0005871: kinesin complex9.02E-03
34GO:0071944: cell periphery1.28E-02
35GO:0005874: microtubule1.75E-02
36GO:0010008: endosome membrane3.68E-02
Gene type



Gene DE type