co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G50900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018160: peptidyl-pyrromethane cofactor linkage	0.00E+00
2	GO:0006783: heme biosynthetic process	5.27E-08
3	GO:0006782: protoporphyrinogen IX biosynthetic process	9.94E-08
4	GO:0015979: photosynthesis	8.31E-07
5	GO:0015995: chlorophyll biosynthetic process	6.71E-06
6	GO:0000476: maturation of 4.5S rRNA	2.76E-05
7	GO:0000967: rRNA 5'-end processing	2.76E-05
8	GO:0010207: photosystem II assembly	3.57E-05
9	GO:0034470: ncRNA processing	7.01E-05
10	GO:0009735: response to cytokinin	9.34E-05
11	GO:0009942: longitudinal axis specification	4.69E-04
12	GO:0050829: defense response to Gram-negative bacterium	5.49E-04
13	GO:0010492: maintenance of shoot apical meristem identity	6.32E-04
14	GO:0007389: pattern specification process	7.18E-04
15	GO:0010206: photosystem II repair	8.07E-04
16	GO:0009245: lipid A biosynthetic process	8.07E-04
17	GO:0048507: meristem development	8.07E-04
18	GO:0006779: porphyrin-containing compound biosynthetic process	8.99E-04
19	GO:0009773: photosynthetic electron transport in photosystem I	1.09E-03
20	GO:0006094: gluconeogenesis	1.29E-03
21	GO:0007017: microtubule-based process	1.85E-03
22	GO:0016998: cell wall macromolecule catabolic process	1.97E-03
23	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.22E-03
24	GO:0042335: cuticle development	2.61E-03
25	GO:0000302: response to reactive oxygen species	3.16E-03
26	GO:0010583: response to cyclopentenone	3.31E-03
27	GO:0009828: plant-type cell wall loosening	3.60E-03
28	GO:0010252: auxin homeostasis	3.60E-03
29	GO:0009627: systemic acquired resistance	4.38E-03
30	GO:0010411: xyloglucan metabolic process	4.54E-03
31	GO:0007568: aging	5.38E-03
32	GO:0016051: carbohydrate biosynthetic process	5.73E-03
33	GO:0034599: cellular response to oxidative stress	5.91E-03
34	GO:0009926: auxin polar transport	6.82E-03
35	GO:0042546: cell wall biogenesis	7.01E-03
36	GO:0009664: plant-type cell wall organization	7.99E-03
37	GO:0051603: proteolysis involved in cellular protein catabolic process	8.60E-03
38	GO:0006096: glycolytic process	9.44E-03
39	GO:0042545: cell wall modification	1.05E-02
40	GO:0042744: hydrogen peroxide catabolic process	1.38E-02
41	GO:0006633: fatty acid biosynthetic process	1.48E-02
42	GO:0007623: circadian rhythm	1.58E-02
43	GO:0045490: pectin catabolic process	1.58E-02
44	GO:0009826: unidimensional cell growth	2.10E-02
45	GO:0048364: root development	3.42E-02
46	GO:0009734: auxin-activated signaling pathway	4.24E-02
47	GO:0009416: response to light stimulus	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0004418: hydroxymethylbilane synthase activity	0.00E+00
2	GO:0004853: uroporphyrinogen decarboxylase activity	0.00E+00
3	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	2.76E-05
4	GO:0031177: phosphopantetheine binding	3.92E-04
5	GO:0004332: fructose-bisphosphate aldolase activity	3.92E-04
6	GO:0004130: cytochrome-c peroxidase activity	3.92E-04
7	GO:0000035: acyl binding	4.69E-04
8	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	6.32E-04
9	GO:0009672: auxin:proton symporter activity	8.99E-04
10	GO:0015020: glucuronosyltransferase activity	9.92E-04
11	GO:0031072: heat shock protein binding	1.29E-03
12	GO:0010329: auxin efflux transmembrane transporter activity	1.29E-03
13	GO:0003756: protein disulfide isomerase activity	2.35E-03
14	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.16E-03
15	GO:0005200: structural constituent of cytoskeleton	3.75E-03
16	GO:0008375: acetylglucosaminyltransferase activity	4.38E-03
17	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.54E-03
18	GO:0004712: protein serine/threonine/tyrosine kinase activity	6.09E-03
19	GO:0004185: serine-type carboxypeptidase activity	6.82E-03
20	GO:0045330: aspartyl esterase activity	9.01E-03
21	GO:0016874: ligase activity	1.03E-02
22	GO:0030599: pectinesterase activity	1.03E-02
23	GO:0051082: unfolded protein binding	1.07E-02
24	GO:0046910: pectinesterase inhibitor activity	1.51E-02
25	GO:0004601: peroxidase activity	2.16E-02
26	GO:0003924: GTPase activity	3.32E-02

Rank	GO Term	Adjusted P value
1	GO:0098572: stromal side of plastid thylakoid membrane	0.00E+00
2	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
3	GO:0009507: chloroplast	8.73E-19
4	GO:0009534: chloroplast thylakoid	8.77E-17
5	GO:0009535: chloroplast thylakoid membrane	6.48E-15
6	GO:0009543: chloroplast thylakoid lumen	4.20E-08
7	GO:0009941: chloroplast envelope	1.70E-06
8	GO:0009538: photosystem I reaction center	7.39E-06
9	GO:0009579: thylakoid	1.09E-05
10	GO:0009508: plastid chromosome	3.08E-05
11	GO:0009570: chloroplast stroma	5.06E-05
12	GO:0030093: chloroplast photosystem I	7.01E-05
13	GO:0009522: photosystem I	1.25E-04
14	GO:0042646: plastid nucleoid	1.83E-04
15	GO:0009295: nucleoid	1.91E-04
16	GO:0031977: thylakoid lumen	4.27E-04
17	GO:0016363: nuclear matrix	4.69E-04
18	GO:0042644: chloroplast nucleoid	8.07E-04
19	GO:0045298: tubulin complex	8.07E-04
20	GO:0010287: plastoglobule	1.01E-03
21	GO:0030095: chloroplast photosystem II	1.40E-03
22	GO:0005618: cell wall	2.87E-03
23	GO:0009523: photosystem II	3.02E-03
24	GO:0071944: cell periphery	3.45E-03
25	GO:0016020: membrane	6.73E-03
26	GO:0005874: microtubule	2.45E-02