co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G50250

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0016120: carotene biosynthetic process	3.46E-07
2	GO:0051775: response to redox state	1.04E-05
3	GO:0051180: vitamin transport	1.04E-05
4	GO:0030974: thiamine pyrophosphate transport	1.04E-05
5	GO:0033481: galacturonate biosynthetic process	1.04E-05
6	GO:0015893: drug transport	2.78E-05
7	GO:0016122: xanthophyll metabolic process	2.78E-05
8	GO:0009915: phloem sucrose loading	2.78E-05
9	GO:0016126: sterol biosynthetic process	5.82E-05
10	GO:0009800: cinnamic acid biosynthetic process	7.70E-05
11	GO:0071484: cellular response to light intensity	7.70E-05
12	GO:0006107: oxaloacetate metabolic process	7.70E-05
13	GO:0006734: NADH metabolic process	1.07E-04
14	GO:0010021: amylopectin biosynthetic process	1.07E-04
15	GO:0015994: chlorophyll metabolic process	1.07E-04
16	GO:0010117: photoprotection	1.40E-04
17	GO:0009644: response to high light intensity	1.48E-04
18	GO:0006559: L-phenylalanine catabolic process	1.74E-04
19	GO:0006857: oligopeptide transport	2.01E-04
20	GO:0010189: vitamin E biosynthetic process	2.11E-04
21	GO:0050829: defense response to Gram-negative bacterium	2.50E-04
22	GO:0009642: response to light intensity	2.90E-04
23	GO:0005978: glycogen biosynthetic process	2.90E-04
24	GO:0009699: phenylpropanoid biosynthetic process	3.32E-04
25	GO:0005982: starch metabolic process	4.18E-04
26	GO:0009773: photosynthetic electron transport in photosystem I	5.09E-04
27	GO:0006108: malate metabolic process	6.04E-04
28	GO:0010207: photosystem II assembly	6.53E-04
29	GO:0009266: response to temperature stimulus	6.53E-04
30	GO:0009225: nucleotide-sugar metabolic process	7.02E-04
31	GO:0009768: photosynthesis, light harvesting in photosystem I	8.59E-04
32	GO:0006817: phosphate ion transport	1.08E-03
33	GO:0016117: carotenoid biosynthetic process	1.13E-03
34	GO:0019252: starch biosynthetic process	1.37E-03
35	GO:0042128: nitrate assimilation	1.97E-03
36	GO:0018298: protein-chromophore linkage	2.19E-03
37	GO:0009611: response to wounding	2.23E-03
38	GO:0010218: response to far red light	2.33E-03
39	GO:0009637: response to blue light	2.56E-03
40	GO:0006099: tricarboxylic acid cycle	2.64E-03
41	GO:0006839: mitochondrial transport	2.80E-03
42	GO:0006631: fatty acid metabolic process	2.88E-03
43	GO:0031347: regulation of defense response	3.46E-03
44	GO:0051603: proteolysis involved in cellular protein catabolic process	3.81E-03
45	GO:0006979: response to oxidative stress	4.40E-03
46	GO:0006413: translational initiation	6.56E-03
47	GO:0009658: chloroplast organization	9.34E-03
48	GO:0055114: oxidation-reduction process	9.77E-03
49	GO:0080167: response to karrikin	1.09E-02
50	GO:0015979: photosynthesis	1.19E-02
51	GO:0009753: response to jasmonic acid	1.50E-02
52	GO:0009414: response to water deprivation	3.50E-02
53	GO:0015031: protein transport	4.22E-02
54	GO:0009409: response to cold	4.42E-02
55	GO:0006810: transport	4.68E-02
56	GO:0005975: carbohydrate metabolic process	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0009976: tocopherol cyclase activity	0.00E+00
2	GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity	0.00E+00
3	GO:0035798: 2-alkenal reductase (NADP+) activity	0.00E+00
4	GO:0045436: lycopene beta cyclase activity	0.00E+00
5	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
6	GO:0009673: low-affinity phosphate transmembrane transporter activity	0.00E+00
7	GO:0004506: squalene monooxygenase activity	2.00E-07
8	GO:0008746: NAD(P)+ transhydrogenase activity	1.04E-05
9	GO:0035671: enone reductase activity	1.04E-05
10	GO:0090422: thiamine pyrophosphate transporter activity	1.04E-05
11	GO:0003844: 1,4-alpha-glucan branching enzyme activity	2.78E-05
12	GO:0043169: cation binding	5.03E-05
13	GO:0045548: phenylalanine ammonia-lyase activity	5.03E-05
14	GO:0050378: UDP-glucuronate 4-epimerase activity	1.07E-04
15	GO:0015293: symporter activity	1.54E-04
16	GO:0035673: oligopeptide transmembrane transporter activity	1.74E-04
17	GO:0016615: malate dehydrogenase activity	1.74E-04
18	GO:0030060: L-malate dehydrogenase activity	2.11E-04
19	GO:0043022: ribosome binding	2.90E-04
20	GO:0015198: oligopeptide transporter activity	5.55E-04
21	GO:0005315: inorganic phosphate transmembrane transporter activity	6.04E-04
22	GO:0031409: pigment binding	7.53E-04
23	GO:0050660: flavin adenine dinucleotide binding	8.10E-04
24	GO:0016853: isomerase activity	1.31E-03
25	GO:0016168: chlorophyll binding	1.90E-03
26	GO:0004185: serine-type carboxypeptidase activity	3.04E-03
27	GO:0005215: transporter activity	4.82E-03
28	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	5.62E-03
29	GO:0009055: electron carrier activity	1.50E-02
30	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.62E-02
31	GO:0005525: GTP binding	3.07E-02
32	GO:0003824: catalytic activity	3.80E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	9.66E-07
2	GO:0009941: chloroplast envelope	5.23E-06
3	GO:0009534: chloroplast thylakoid	1.49E-05
4	GO:0009706: chloroplast inner membrane	2.70E-04
5	GO:0009501: amyloplast	2.90E-04
6	GO:0010287: plastoglobule	3.20E-04
7	GO:0030076: light-harvesting complex	7.02E-04
8	GO:0016021: integral component of membrane	7.24E-04
9	GO:0009570: chloroplast stroma	9.49E-04
10	GO:0009522: photosystem I	1.31E-03
11	GO:0009523: photosystem II	1.37E-03
12	GO:0009535: chloroplast thylakoid membrane	1.39E-03
13	GO:0032580: Golgi cisterna membrane	1.63E-03
14	GO:0010319: stromule	1.70E-03
15	GO:0009579: thylakoid	2.60E-03
16	GO:0031969: chloroplast membrane	1.09E-02
17	GO:0005743: mitochondrial inner membrane	1.36E-02
18	GO:0048046: apoplast	1.59E-02
19	GO:0005887: integral component of plasma membrane	1.78E-02
20	GO:0005802: trans-Golgi network	3.01E-02
21	GO:0005783: endoplasmic reticulum	3.06E-02
22	GO:0005768: endosome	3.30E-02