GO Enrichment Analysis of Co-expressed Genes with
AT1G50010
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:0071258: cellular response to gravity | 3.65E-08 |
| 4 | GO:0006426: glycyl-tRNA aminoacylation | 2.19E-05 |
| 5 | GO:0006430: lysyl-tRNA aminoacylation | 2.19E-05 |
| 6 | GO:0006418: tRNA aminoacylation for protein translation | 4.24E-05 |
| 7 | GO:0007017: microtubule-based process | 4.24E-05 |
| 8 | GO:0006568: tryptophan metabolic process | 5.64E-05 |
| 9 | GO:0006695: cholesterol biosynthetic process | 5.64E-05 |
| 10 | GO:0030835: negative regulation of actin filament depolymerization | 9.94E-05 |
| 11 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 9.94E-05 |
| 12 | GO:2001141: regulation of RNA biosynthetic process | 1.49E-04 |
| 13 | GO:0006241: CTP biosynthetic process | 1.49E-04 |
| 14 | GO:0019048: modulation by virus of host morphology or physiology | 1.49E-04 |
| 15 | GO:0006165: nucleoside diphosphate phosphorylation | 1.49E-04 |
| 16 | GO:0006228: UTP biosynthetic process | 1.49E-04 |
| 17 | GO:0031048: chromatin silencing by small RNA | 1.49E-04 |
| 18 | GO:0010088: phloem development | 1.49E-04 |
| 19 | GO:0006183: GTP biosynthetic process | 2.04E-04 |
| 20 | GO:0051567: histone H3-K9 methylation | 2.04E-04 |
| 21 | GO:0048481: plant ovule development | 2.11E-04 |
| 22 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.62E-04 |
| 23 | GO:0048359: mucilage metabolic process involved in seed coat development | 2.62E-04 |
| 24 | GO:0006631: fatty acid metabolic process | 3.21E-04 |
| 25 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 3.24E-04 |
| 26 | GO:0016458: gene silencing | 3.24E-04 |
| 27 | GO:0045995: regulation of embryonic development | 4.56E-04 |
| 28 | GO:0051693: actin filament capping | 4.56E-04 |
| 29 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 4.56E-04 |
| 30 | GO:0048564: photosystem I assembly | 5.25E-04 |
| 31 | GO:0045292: mRNA cis splicing, via spliceosome | 5.25E-04 |
| 32 | GO:0071482: cellular response to light stimulus | 5.98E-04 |
| 33 | GO:0010233: phloem transport | 5.98E-04 |
| 34 | GO:0033384: geranyl diphosphate biosynthetic process | 6.71E-04 |
| 35 | GO:0000373: Group II intron splicing | 6.71E-04 |
| 36 | GO:0015780: nucleotide-sugar transport | 6.71E-04 |
| 37 | GO:0045337: farnesyl diphosphate biosynthetic process | 6.71E-04 |
| 38 | GO:0030422: production of siRNA involved in RNA interference | 8.27E-04 |
| 39 | GO:0006352: DNA-templated transcription, initiation | 9.07E-04 |
| 40 | GO:0006633: fatty acid biosynthetic process | 1.01E-03 |
| 41 | GO:0007015: actin filament organization | 1.16E-03 |
| 42 | GO:0051017: actin filament bundle assembly | 1.43E-03 |
| 43 | GO:0007010: cytoskeleton organization | 1.43E-03 |
| 44 | GO:0008299: isoprenoid biosynthetic process | 1.53E-03 |
| 45 | GO:0006306: DNA methylation | 1.63E-03 |
| 46 | GO:0009411: response to UV | 1.83E-03 |
| 47 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.04E-03 |
| 48 | GO:0010051: xylem and phloem pattern formation | 2.15E-03 |
| 49 | GO:0000226: microtubule cytoskeleton organization | 2.15E-03 |
| 50 | GO:0006342: chromatin silencing | 2.26E-03 |
| 51 | GO:0010305: leaf vascular tissue pattern formation | 2.26E-03 |
| 52 | GO:0007018: microtubule-based movement | 2.38E-03 |
| 53 | GO:0071805: potassium ion transmembrane transport | 3.09E-03 |
| 54 | GO:0051607: defense response to virus | 3.22E-03 |
| 55 | GO:0009816: defense response to bacterium, incompatible interaction | 3.47E-03 |
| 56 | GO:0009734: auxin-activated signaling pathway | 4.25E-03 |
| 57 | GO:0009637: response to blue light | 4.70E-03 |
| 58 | GO:0042542: response to hydrogen peroxide | 5.45E-03 |
| 59 | GO:0010114: response to red light | 5.60E-03 |
| 60 | GO:0008643: carbohydrate transport | 5.91E-03 |
| 61 | GO:0009585: red, far-red light phototransduction | 6.88E-03 |
| 62 | GO:0006813: potassium ion transport | 6.88E-03 |
| 63 | GO:0006417: regulation of translation | 7.38E-03 |
| 64 | GO:0006096: glycolytic process | 7.73E-03 |
| 65 | GO:0009742: brassinosteroid mediated signaling pathway | 9.16E-03 |
| 66 | GO:0006412: translation | 1.30E-02 |
| 67 | GO:0009451: RNA modification | 1.31E-02 |
| 68 | GO:0009658: chloroplast organization | 1.76E-02 |
| 69 | GO:0006970: response to osmotic stress | 1.86E-02 |
| 70 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.10E-02 |
| 71 | GO:0015979: photosynthesis | 2.25E-02 |
| 72 | GO:0045454: cell redox homeostasis | 2.33E-02 |
| 73 | GO:0009793: embryo development ending in seed dormancy | 2.51E-02 |
| 74 | GO:0009651: response to salt stress | 3.64E-02 |
| 75 | GO:0009738: abscisic acid-activated signaling pathway | 3.98E-02 |
| 76 | GO:0006457: protein folding | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005048: signal sequence binding | 0.00E+00 |
| 2 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 3 | GO:0009374: biotin binding | 2.19E-05 |
| 4 | GO:0004820: glycine-tRNA ligase activity | 2.19E-05 |
| 5 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 2.19E-05 |
| 6 | GO:0004824: lysine-tRNA ligase activity | 2.19E-05 |
| 7 | GO:0000774: adenyl-nucleotide exchange factor activity | 5.64E-05 |
| 8 | GO:0004812: aminoacyl-tRNA ligase activity | 7.06E-05 |
| 9 | GO:0070330: aromatase activity | 9.94E-05 |
| 10 | GO:0002161: aminoacyl-tRNA editing activity | 9.94E-05 |
| 11 | GO:0005200: structural constituent of cytoskeleton | 1.41E-04 |
| 12 | GO:0004550: nucleoside diphosphate kinase activity | 1.49E-04 |
| 13 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.49E-04 |
| 14 | GO:0035197: siRNA binding | 1.49E-04 |
| 15 | GO:0001053: plastid sigma factor activity | 2.04E-04 |
| 16 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 2.04E-04 |
| 17 | GO:0016987: sigma factor activity | 2.04E-04 |
| 18 | GO:0018685: alkane 1-monooxygenase activity | 2.62E-04 |
| 19 | GO:0003989: acetyl-CoA carboxylase activity | 2.62E-04 |
| 20 | GO:0102391: decanoate--CoA ligase activity | 3.89E-04 |
| 21 | GO:0004467: long-chain fatty acid-CoA ligase activity | 4.56E-04 |
| 22 | GO:0016831: carboxy-lyase activity | 4.56E-04 |
| 23 | GO:0008312: 7S RNA binding | 5.25E-04 |
| 24 | GO:0004337: geranyltranstransferase activity | 6.71E-04 |
| 25 | GO:0019843: rRNA binding | 8.13E-04 |
| 26 | GO:0004161: dimethylallyltranstransferase activity | 9.07E-04 |
| 27 | GO:0004521: endoribonuclease activity | 9.89E-04 |
| 28 | GO:0000049: tRNA binding | 9.89E-04 |
| 29 | GO:0008266: poly(U) RNA binding | 1.16E-03 |
| 30 | GO:0015079: potassium ion transmembrane transporter activity | 1.53E-03 |
| 31 | GO:0051087: chaperone binding | 1.53E-03 |
| 32 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 1.63E-03 |
| 33 | GO:0003682: chromatin binding | 1.77E-03 |
| 34 | GO:0008514: organic anion transmembrane transporter activity | 1.94E-03 |
| 35 | GO:0001085: RNA polymerase II transcription factor binding | 2.26E-03 |
| 36 | GO:0042803: protein homodimerization activity | 2.58E-03 |
| 37 | GO:0051015: actin filament binding | 2.85E-03 |
| 38 | GO:0003924: GTPase activity | 3.03E-03 |
| 39 | GO:0003735: structural constituent of ribosome | 3.83E-03 |
| 40 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 4.42E-03 |
| 41 | GO:0043621: protein self-association | 5.91E-03 |
| 42 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 6.88E-03 |
| 43 | GO:0003777: microtubule motor activity | 7.38E-03 |
| 44 | GO:0003779: actin binding | 8.61E-03 |
| 45 | GO:0005525: GTP binding | 8.77E-03 |
| 46 | GO:0051082: unfolded protein binding | 8.79E-03 |
| 47 | GO:0005524: ATP binding | 9.13E-03 |
| 48 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.13E-02 |
| 49 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.23E-02 |
| 50 | GO:0008017: microtubule binding | 1.33E-02 |
| 51 | GO:0003729: mRNA binding | 1.61E-02 |
| 52 | GO:0004519: endonuclease activity | 2.87E-02 |
| 53 | GO:0016887: ATPase activity | 3.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009570: chloroplast stroma | 6.50E-13 |
| 2 | GO:0009507: chloroplast | 1.10E-07 |
| 3 | GO:0045298: tubulin complex | 8.46E-06 |
| 4 | GO:0009547: plastid ribosome | 2.19E-05 |
| 5 | GO:0080085: signal recognition particle, chloroplast targeting | 5.64E-05 |
| 6 | GO:0009941: chloroplast envelope | 7.22E-05 |
| 7 | GO:0009579: thylakoid | 8.88E-05 |
| 8 | GO:0009317: acetyl-CoA carboxylase complex | 9.94E-05 |
| 9 | GO:0005719: nuclear euchromatin | 1.49E-04 |
| 10 | GO:0000793: condensed chromosome | 3.24E-04 |
| 11 | GO:0000794: condensed nuclear chromosome | 4.56E-04 |
| 12 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 5.98E-04 |
| 13 | GO:0015030: Cajal body | 7.48E-04 |
| 14 | GO:0000311: plastid large ribosomal subunit | 9.89E-04 |
| 15 | GO:0000312: plastid small ribosomal subunit | 1.16E-03 |
| 16 | GO:0030659: cytoplasmic vesicle membrane | 1.16E-03 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 1.53E-03 |
| 18 | GO:0015629: actin cytoskeleton | 1.83E-03 |
| 19 | GO:0005874: microtubule | 2.00E-03 |
| 20 | GO:0005871: kinesin complex | 2.04E-03 |
| 21 | GO:0019898: extrinsic component of membrane | 2.49E-03 |
| 22 | GO:0009295: nucleoid | 3.09E-03 |
| 23 | GO:0030529: intracellular ribonucleoprotein complex | 3.34E-03 |
| 24 | GO:0005667: transcription factor complex | 3.60E-03 |
| 25 | GO:0000325: plant-type vacuole | 4.42E-03 |
| 26 | GO:0022626: cytosolic ribosome | 5.11E-03 |
| 27 | GO:0031977: thylakoid lumen | 5.30E-03 |
| 28 | GO:0005856: cytoskeleton | 6.07E-03 |
| 29 | GO:0009534: chloroplast thylakoid | 6.44E-03 |
| 30 | GO:0005654: nucleoplasm | 1.01E-02 |
| 31 | GO:0009543: chloroplast thylakoid lumen | 1.03E-02 |
| 32 | GO:0016020: membrane | 1.08E-02 |
| 33 | GO:0005840: ribosome | 1.13E-02 |
| 34 | GO:0005759: mitochondrial matrix | 1.21E-02 |
| 35 | GO:0009536: plastid | 1.33E-02 |
| 36 | GO:0022627: cytosolic small ribosomal subunit | 1.58E-02 |
| 37 | GO:0005730: nucleolus | 1.83E-02 |
| 38 | GO:0022625: cytosolic large ribosomal subunit | 2.13E-02 |
| 39 | GO:0009535: chloroplast thylakoid membrane | 2.43E-02 |
| 40 | GO:0043231: intracellular membrane-bounded organelle | 2.90E-02 |
| 41 | GO:0005774: vacuolar membrane | 3.75E-02 |
| 42 | GO:0005618: cell wall | 4.29E-02 |