GO Enrichment Analysis of Co-expressed Genes with
AT1G49975
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007172: signal complex assembly | 0.00E+00 |
| 2 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 3 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 4 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 5 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 0.00E+00 |
| 6 | GO:0015995: chlorophyll biosynthetic process | 7.92E-10 |
| 7 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.16E-08 |
| 8 | GO:0016122: xanthophyll metabolic process | 4.47E-07 |
| 9 | GO:0006783: heme biosynthetic process | 8.87E-07 |
| 10 | GO:0006824: cobalt ion transport | 9.14E-05 |
| 11 | GO:0000476: maturation of 4.5S rRNA | 9.14E-05 |
| 12 | GO:0000967: rRNA 5'-end processing | 9.14E-05 |
| 13 | GO:0015671: oxygen transport | 9.14E-05 |
| 14 | GO:0031338: regulation of vesicle fusion | 9.14E-05 |
| 15 | GO:0010028: xanthophyll cycle | 9.14E-05 |
| 16 | GO:0006779: porphyrin-containing compound biosynthetic process | 9.45E-05 |
| 17 | GO:0009735: response to cytokinin | 2.02E-04 |
| 18 | GO:0010207: photosystem II assembly | 2.02E-04 |
| 19 | GO:0034755: iron ion transmembrane transport | 2.16E-04 |
| 20 | GO:0010541: acropetal auxin transport | 2.16E-04 |
| 21 | GO:0018026: peptidyl-lysine monomethylation | 2.16E-04 |
| 22 | GO:0034470: ncRNA processing | 2.16E-04 |
| 23 | GO:0010160: formation of animal organ boundary | 3.61E-04 |
| 24 | GO:0090391: granum assembly | 3.61E-04 |
| 25 | GO:0045493: xylan catabolic process | 3.61E-04 |
| 26 | GO:0090630: activation of GTPase activity | 3.61E-04 |
| 27 | GO:0015979: photosynthesis | 3.79E-04 |
| 28 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 4.15E-04 |
| 29 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 5.20E-04 |
| 30 | GO:0015994: chlorophyll metabolic process | 6.90E-04 |
| 31 | GO:0042938: dipeptide transport | 6.90E-04 |
| 32 | GO:0009828: plant-type cell wall loosening | 8.34E-04 |
| 33 | GO:0010117: photoprotection | 8.73E-04 |
| 34 | GO:0009913: epidermal cell differentiation | 1.07E-03 |
| 35 | GO:0060918: auxin transport | 1.07E-03 |
| 36 | GO:0010411: xyloglucan metabolic process | 1.15E-03 |
| 37 | GO:0009942: longitudinal axis specification | 1.27E-03 |
| 38 | GO:0050829: defense response to Gram-negative bacterium | 1.49E-03 |
| 39 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.72E-03 |
| 40 | GO:0006353: DNA-templated transcription, termination | 1.72E-03 |
| 41 | GO:0010492: maintenance of shoot apical meristem identity | 1.72E-03 |
| 42 | GO:0006631: fatty acid metabolic process | 1.89E-03 |
| 43 | GO:0007389: pattern specification process | 1.96E-03 |
| 44 | GO:0009926: auxin polar transport | 2.05E-03 |
| 45 | GO:0009245: lipid A biosynthetic process | 2.21E-03 |
| 46 | GO:0019432: triglyceride biosynthetic process | 2.21E-03 |
| 47 | GO:0048507: meristem development | 2.21E-03 |
| 48 | GO:0010206: photosystem II repair | 2.21E-03 |
| 49 | GO:0009638: phototropism | 2.48E-03 |
| 50 | GO:0009664: plant-type cell wall organization | 2.56E-03 |
| 51 | GO:0009688: abscisic acid biosynthetic process | 2.75E-03 |
| 52 | GO:0006949: syncytium formation | 2.75E-03 |
| 53 | GO:1903507: negative regulation of nucleic acid-templated transcription | 3.03E-03 |
| 54 | GO:0015706: nitrate transport | 3.32E-03 |
| 55 | GO:0008361: regulation of cell size | 3.32E-03 |
| 56 | GO:0009785: blue light signaling pathway | 3.63E-03 |
| 57 | GO:0030048: actin filament-based movement | 3.63E-03 |
| 58 | GO:0010540: basipetal auxin transport | 3.93E-03 |
| 59 | GO:0009934: regulation of meristem structural organization | 3.93E-03 |
| 60 | GO:0007017: microtubule-based process | 5.27E-03 |
| 61 | GO:0016998: cell wall macromolecule catabolic process | 5.62E-03 |
| 62 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 5.98E-03 |
| 63 | GO:0007623: circadian rhythm | 6.70E-03 |
| 64 | GO:0048443: stamen development | 6.73E-03 |
| 65 | GO:0042335: cuticle development | 7.51E-03 |
| 66 | GO:0009958: positive gravitropism | 7.91E-03 |
| 67 | GO:0009741: response to brassinosteroid | 7.91E-03 |
| 68 | GO:0007018: microtubule-based movement | 8.32E-03 |
| 69 | GO:0048825: cotyledon development | 8.74E-03 |
| 70 | GO:0000302: response to reactive oxygen species | 9.16E-03 |
| 71 | GO:0010583: response to cyclopentenone | 9.60E-03 |
| 72 | GO:0016032: viral process | 9.60E-03 |
| 73 | GO:0009826: unidimensional cell growth | 9.99E-03 |
| 74 | GO:0010252: auxin homeostasis | 1.05E-02 |
| 75 | GO:0009639: response to red or far red light | 1.05E-02 |
| 76 | GO:0009627: systemic acquired resistance | 1.28E-02 |
| 77 | GO:0010218: response to far red light | 1.54E-02 |
| 78 | GO:0048527: lateral root development | 1.59E-02 |
| 79 | GO:0007568: aging | 1.59E-02 |
| 80 | GO:0016051: carbohydrate biosynthetic process | 1.69E-02 |
| 81 | GO:0009637: response to blue light | 1.69E-02 |
| 82 | GO:0034599: cellular response to oxidative stress | 1.75E-02 |
| 83 | GO:0048364: root development | 1.99E-02 |
| 84 | GO:0009640: photomorphogenesis | 2.03E-02 |
| 85 | GO:0042546: cell wall biogenesis | 2.09E-02 |
| 86 | GO:0031347: regulation of defense response | 2.32E-02 |
| 87 | GO:0006364: rRNA processing | 2.51E-02 |
| 88 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.57E-02 |
| 89 | GO:0006857: oligopeptide transport | 2.63E-02 |
| 90 | GO:0009734: auxin-activated signaling pathway | 2.69E-02 |
| 91 | GO:0042545: cell wall modification | 3.16E-02 |
| 92 | GO:0009416: response to light stimulus | 3.38E-02 |
| 93 | GO:0009845: seed germination | 4.00E-02 |
| 94 | GO:0042744: hydrogen peroxide catabolic process | 4.15E-02 |
| 95 | GO:0055085: transmembrane transport | 4.28E-02 |
| 96 | GO:0006633: fatty acid biosynthetic process | 4.45E-02 |
| 97 | GO:0045490: pectin catabolic process | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 2 | GO:0004853: uroporphyrinogen decarboxylase activity | 0.00E+00 |
| 3 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 4 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 5 | GO:0004418: hydroxymethylbilane synthase activity | 0.00E+00 |
| 6 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 9.14E-05 |
| 7 | GO:0004856: xylulokinase activity | 9.14E-05 |
| 8 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 9.14E-05 |
| 9 | GO:0005344: oxygen transporter activity | 9.14E-05 |
| 10 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 9.14E-05 |
| 11 | GO:0010329: auxin efflux transmembrane transporter activity | 1.77E-04 |
| 12 | GO:0019172: glyoxalase III activity | 2.16E-04 |
| 13 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.16E-04 |
| 14 | GO:0016851: magnesium chelatase activity | 5.20E-04 |
| 15 | GO:0009044: xylan 1,4-beta-xylosidase activity | 6.90E-04 |
| 16 | GO:0046556: alpha-L-arabinofuranosidase activity | 6.90E-04 |
| 17 | GO:0016279: protein-lysine N-methyltransferase activity | 6.90E-04 |
| 18 | GO:0042936: dipeptide transporter activity | 6.90E-04 |
| 19 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 8.73E-04 |
| 20 | GO:0017137: Rab GTPase binding | 8.73E-04 |
| 21 | GO:0004130: cytochrome-c peroxidase activity | 1.07E-03 |
| 22 | GO:0031177: phosphopantetheine binding | 1.07E-03 |
| 23 | GO:0004462: lactoylglutathione lyase activity | 1.07E-03 |
| 24 | GO:0016832: aldehyde-lyase activity | 1.27E-03 |
| 25 | GO:0000035: acyl binding | 1.27E-03 |
| 26 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.72E-03 |
| 27 | GO:0005381: iron ion transmembrane transporter activity | 2.48E-03 |
| 28 | GO:0009672: auxin:proton symporter activity | 2.48E-03 |
| 29 | GO:0015020: glucuronosyltransferase activity | 2.75E-03 |
| 30 | GO:0047372: acylglycerol lipase activity | 3.03E-03 |
| 31 | GO:0003777: microtubule motor activity | 3.04E-03 |
| 32 | GO:0031072: heat shock protein binding | 3.63E-03 |
| 33 | GO:0003774: motor activity | 3.93E-03 |
| 34 | GO:0003714: transcription corepressor activity | 4.92E-03 |
| 35 | GO:0033612: receptor serine/threonine kinase binding | 5.62E-03 |
| 36 | GO:0003756: protein disulfide isomerase activity | 6.73E-03 |
| 37 | GO:0016301: kinase activity | 6.87E-03 |
| 38 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 9.16E-03 |
| 39 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.09E-02 |
| 40 | GO:0005200: structural constituent of cytoskeleton | 1.09E-02 |
| 41 | GO:0008375: acetylglucosaminyltransferase activity | 1.28E-02 |
| 42 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.33E-02 |
| 43 | GO:0005096: GTPase activator activity | 1.48E-02 |
| 44 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.59E-02 |
| 45 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.80E-02 |
| 46 | GO:0005215: transporter activity | 1.92E-02 |
| 47 | GO:0004185: serine-type carboxypeptidase activity | 2.03E-02 |
| 48 | GO:0043621: protein self-association | 2.14E-02 |
| 49 | GO:0008289: lipid binding | 2.65E-02 |
| 50 | GO:0045330: aspartyl esterase activity | 2.70E-02 |
| 51 | GO:0020037: heme binding | 2.99E-02 |
| 52 | GO:0016874: ligase activity | 3.09E-02 |
| 53 | GO:0030599: pectinesterase activity | 3.09E-02 |
| 54 | GO:0051082: unfolded protein binding | 3.22E-02 |
| 55 | GO:0005515: protein binding | 3.48E-02 |
| 56 | GO:0016787: hydrolase activity | 4.36E-02 |
| 57 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.52E-02 |
| 58 | GO:0046910: pectinesterase inhibitor activity | 4.52E-02 |
| 59 | GO:0019825: oxygen binding | 4.79E-02 |
| 60 | GO:0008017: microtubule binding | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.17E-15 |
| 4 | GO:0009534: chloroplast thylakoid | 7.19E-14 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.76E-11 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 9.53E-08 |
| 7 | GO:0009570: chloroplast stroma | 8.16E-06 |
| 8 | GO:0009941: chloroplast envelope | 1.28E-05 |
| 9 | GO:0009538: photosystem I reaction center | 4.94E-05 |
| 10 | GO:0010287: plastoglobule | 5.05E-05 |
| 11 | GO:0031977: thylakoid lumen | 1.72E-04 |
| 12 | GO:0009508: plastid chromosome | 1.77E-04 |
| 13 | GO:0030095: chloroplast photosystem II | 2.02E-04 |
| 14 | GO:0009579: thylakoid | 3.37E-04 |
| 15 | GO:0010007: magnesium chelatase complex | 3.61E-04 |
| 16 | GO:0042646: plastid nucleoid | 5.20E-04 |
| 17 | GO:0009517: PSII associated light-harvesting complex II | 6.90E-04 |
| 18 | GO:0009295: nucleoid | 8.83E-04 |
| 19 | GO:0016363: nuclear matrix | 1.27E-03 |
| 20 | GO:0016020: membrane | 1.70E-03 |
| 21 | GO:0042644: chloroplast nucleoid | 2.21E-03 |
| 22 | GO:0045298: tubulin complex | 2.21E-03 |
| 23 | GO:0016459: myosin complex | 2.75E-03 |
| 24 | GO:0005618: cell wall | 2.80E-03 |
| 25 | GO:0005871: kinesin complex | 7.11E-03 |
| 26 | GO:0009523: photosystem II | 8.74E-03 |
| 27 | GO:0071944: cell periphery | 1.00E-02 |
| 28 | GO:0005874: microtubule | 1.24E-02 |
| 29 | GO:0031969: chloroplast membrane | 1.29E-02 |
| 30 | GO:0000325: plant-type vacuole | 1.59E-02 |
| 31 | GO:0009505: plant-type cell wall | 2.24E-02 |
| 32 | GO:0012505: endomembrane system | 3.16E-02 |
| 33 | GO:0009706: chloroplast inner membrane | 3.22E-02 |