co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G49660

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
2	GO:0015822: ornithine transport	0.00E+00
3	GO:0009715: chalcone biosynthetic process	0.00E+00
4	GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene	0.00E+00
5	GO:0009813: flavonoid biosynthetic process	1.52E-10
6	GO:0080167: response to karrikin	1.56E-09
7	GO:0045489: pectin biosynthetic process	1.78E-06
8	GO:0009411: response to UV	3.77E-05
9	GO:0010224: response to UV-B	5.93E-05
10	GO:0071555: cell wall organization	1.23E-04
11	GO:0000066: mitochondrial ornithine transport	1.40E-04
12	GO:1901349: glucosinolate transport	1.40E-04
13	GO:1902265: abscisic acid homeostasis	1.40E-04
14	GO:0090449: phloem glucosinolate loading	1.40E-04
15	GO:0046244: salicylic acid catabolic process	1.40E-04
16	GO:0006659: phosphatidylserine biosynthetic process	1.40E-04
17	GO:0009698: phenylpropanoid metabolic process	2.44E-04
18	GO:0009637: response to blue light	2.97E-04
19	GO:0009629: response to gravity	3.20E-04
20	GO:0000719: photoreactive repair	3.20E-04
21	GO:0007154: cell communication	3.20E-04
22	GO:0030036: actin cytoskeleton organization	3.21E-04
23	GO:0019253: reductive pentose-phosphate cycle	3.63E-04
24	GO:0005977: glycogen metabolic process	5.26E-04
25	GO:0006011: UDP-glucose metabolic process	5.26E-04
26	GO:0031022: nuclear migration along microfilament	5.26E-04
27	GO:0040007: growth	7.22E-04
28	GO:0009733: response to auxin	7.42E-04
29	GO:0006096: glycolytic process	7.46E-04
30	GO:0046653: tetrahydrofolate metabolic process	7.53E-04
31	GO:0051016: barbed-end actin filament capping	7.53E-04
32	GO:0042823: pyridoxal phosphate biosynthetic process	7.53E-04
33	GO:0009800: cinnamic acid biosynthetic process	7.53E-04
34	GO:0009650: UV protection	7.53E-04
35	GO:0019722: calcium-mediated signaling	7.83E-04
36	GO:0000271: polysaccharide biosynthetic process	9.10E-04
37	GO:0009741: response to brassinosteroid	9.78E-04
38	GO:0009765: photosynthesis, light harvesting	9.98E-04
39	GO:0006021: inositol biosynthetic process	9.98E-04
40	GO:0009902: chloroplast relocation	9.98E-04
41	GO:0009694: jasmonic acid metabolic process	9.98E-04
42	GO:0009791: post-embryonic development	1.12E-03
43	GO:0032876: negative regulation of DNA endoreduplication	1.26E-03
44	GO:0016120: carotene biosynthetic process	1.26E-03
45	GO:0007264: small GTPase mediated signal transduction	1.27E-03
46	GO:0010583: response to cyclopentenone	1.27E-03
47	GO:0007267: cell-cell signaling	1.53E-03
48	GO:0010942: positive regulation of cell death	1.55E-03
49	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.55E-03
50	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.55E-03
51	GO:0006559: L-phenylalanine catabolic process	1.55E-03
52	GO:0016126: sterol biosynthetic process	1.71E-03
53	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.86E-03
54	GO:0045926: negative regulation of growth	1.86E-03
55	GO:0017148: negative regulation of translation	1.86E-03
56	GO:0009903: chloroplast avoidance movement	1.86E-03
57	GO:0051510: regulation of unidimensional cell growth	2.18E-03
58	GO:0045010: actin nucleation	2.52E-03
59	GO:0031540: regulation of anthocyanin biosynthetic process	2.52E-03
60	GO:0052543: callose deposition in cell wall	2.52E-03
61	GO:0007155: cell adhesion	2.52E-03
62	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.52E-03
63	GO:0009819: drought recovery	2.52E-03
64	GO:0016051: carbohydrate biosynthetic process	2.81E-03
65	GO:0009699: phenylpropanoid biosynthetic process	2.88E-03
66	GO:0022900: electron transport chain	2.88E-03
67	GO:0048193: Golgi vesicle transport	2.88E-03
68	GO:0007389: pattern specification process	2.88E-03
69	GO:0000902: cell morphogenesis	3.26E-03
70	GO:0042546: cell wall biogenesis	3.75E-03
71	GO:0010192: mucilage biosynthetic process	4.06E-03
72	GO:0051555: flavonol biosynthetic process	4.06E-03
73	GO:0000038: very long-chain fatty acid metabolic process	4.48E-03
74	GO:0000272: polysaccharide catabolic process	4.48E-03
75	GO:0046274: lignin catabolic process	5.37E-03
76	GO:0030048: actin filament-based movement	5.37E-03
77	GO:0006006: glucose metabolic process	5.37E-03
78	GO:0048768: root hair cell tip growth	5.84E-03
79	GO:0009825: multidimensional cell growth	6.32E-03
80	GO:0016042: lipid catabolic process	6.68E-03
81	GO:0009833: plant-type primary cell wall biogenesis	6.81E-03
82	GO:0006833: water transport	6.81E-03
83	GO:0009742: brassinosteroid mediated signaling pathway	7.31E-03
84	GO:0006487: protein N-linked glycosylation	7.32E-03
85	GO:0009695: jasmonic acid biosynthetic process	7.84E-03
86	GO:0009768: photosynthesis, light harvesting in photosystem I	7.84E-03
87	GO:0031408: oxylipin biosynthetic process	8.38E-03
88	GO:0010584: pollen exine formation	1.01E-02
89	GO:0016117: carotenoid biosynthetic process	1.06E-02
90	GO:0006633: fatty acid biosynthetic process	1.09E-02
91	GO:0010051: xylem and phloem pattern formation	1.12E-02
92	GO:0000226: microtubule cytoskeleton organization	1.12E-02
93	GO:0042335: cuticle development	1.12E-02
94	GO:0034220: ion transmembrane transport	1.12E-02
95	GO:0006468: protein phosphorylation	1.22E-02
96	GO:0008654: phospholipid biosynthetic process	1.31E-02
97	GO:0006635: fatty acid beta-oxidation	1.37E-02
98	GO:0009416: response to light stimulus	1.44E-02
99	GO:0009611: response to wounding	1.48E-02
100	GO:0010029: regulation of seed germination	1.86E-02
101	GO:0009860: pollen tube growth	2.00E-02
102	GO:0030244: cellulose biosynthetic process	2.16E-02
103	GO:0018298: protein-chromophore linkage	2.16E-02
104	GO:0009832: plant-type cell wall biogenesis	2.23E-02
105	GO:0010218: response to far red light	2.31E-02
106	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.38E-02
107	GO:0010119: regulation of stomatal movement	2.39E-02
108	GO:0009867: jasmonic acid mediated signaling pathway	2.55E-02
109	GO:0006839: mitochondrial transport	2.80E-02
110	GO:0010114: response to red light	3.06E-02
111	GO:0009926: auxin polar transport	3.06E-02
112	GO:0009744: response to sucrose	3.06E-02
113	GO:0032259: methylation	3.25E-02
114	GO:0006629: lipid metabolic process	3.39E-02
115	GO:0031347: regulation of defense response	3.50E-02
116	GO:0016310: phosphorylation	3.56E-02
117	GO:0008152: metabolic process	3.74E-02
118	GO:0009809: lignin biosynthetic process	3.78E-02
119	GO:0051603: proteolysis involved in cellular protein catabolic process	3.87E-02
120	GO:0006857: oligopeptide transport	3.97E-02

Rank	GO Term	Adjusted P value
1	GO:0102078: methyl jasmonate methylesterase activity	0.00E+00
2	GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity	0.00E+00
3	GO:0045486: naringenin 3-dioxygenase activity	0.00E+00
4	GO:0016719: carotene 7,8-desaturase activity	0.00E+00
5	GO:0016711: flavonoid 3'-monooxygenase activity	0.00E+00
6	GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity	0.00E+00
7	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
8	GO:0033961: cis-stilbene-oxide hydrolase activity	0.00E+00
9	GO:0016210: naringenin-chalcone synthase activity	0.00E+00
10	GO:0047213: anthocyanidin 3-O-glucosyltransferase activity	0.00E+00
11	GO:0003904: deoxyribodipyrimidine photo-lyase activity	0.00E+00
12	GO:0008115: sarcosine oxidase activity	0.00E+00
13	GO:0050613: delta14-sterol reductase activity	0.00E+00
14	GO:0030795: jasmonate O-methyltransferase activity	0.00E+00
15	GO:0016757: transferase activity, transferring glycosyl groups	8.96E-07
16	GO:0045430: chalcone isomerase activity	1.59E-05
17	GO:0090448: glucosinolate:proton symporter activity	1.40E-04
18	GO:0030797: 24-methylenesterol C-methyltransferase activity	1.40E-04
19	GO:0010313: phytochrome binding	1.40E-04
20	GO:0004618: phosphoglycerate kinase activity	3.20E-04
21	GO:0000064: L-ornithine transmembrane transporter activity	3.20E-04
22	GO:0004512: inositol-3-phosphate synthase activity	3.20E-04
23	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	3.20E-04
24	GO:0048531: beta-1,3-galactosyltransferase activity	3.20E-04
25	GO:0031418: L-ascorbic acid binding	5.03E-04
26	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	5.26E-04
27	GO:0045548: phenylalanine ammonia-lyase activity	5.26E-04
28	GO:0003913: DNA photolyase activity	5.26E-04
29	GO:0051087: chaperone binding	5.53E-04
30	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	6.63E-04
31	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	7.53E-04
32	GO:0048027: mRNA 5'-UTR binding	7.53E-04
33	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	7.53E-04
34	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	7.53E-04
35	GO:0004301: epoxide hydrolase activity	9.98E-04
36	GO:0046527: glucosyltransferase activity	9.98E-04
37	GO:0019901: protein kinase binding	1.12E-03
38	GO:0016758: transferase activity, transferring hexosyl groups	1.20E-03
39	GO:0045431: flavonol synthase activity	1.26E-03
40	GO:0016759: cellulose synthase activity	1.44E-03
41	GO:0102229: amylopectin maltohydrolase activity	1.55E-03
42	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	1.55E-03
43	GO:0016161: beta-amylase activity	1.86E-03
44	GO:0008194: UDP-glycosyltransferase activity	2.14E-03
45	GO:0102425: myricetin 3-O-glucosyltransferase activity	2.18E-03
46	GO:0102360: daphnetin 3-O-glucosyltransferase activity	2.18E-03
47	GO:0016621: cinnamoyl-CoA reductase activity	2.18E-03
48	GO:0047893: flavonol 3-O-glucosyltransferase activity	2.52E-03
49	GO:0016207: 4-coumarate-CoA ligase activity	3.26E-03
50	GO:0030955: potassium ion binding	3.65E-03
51	GO:0004743: pyruvate kinase activity	3.65E-03
52	GO:0052689: carboxylic ester hydrolase activity	4.80E-03
53	GO:0016298: lipase activity	5.02E-03
54	GO:0008081: phosphoric diester hydrolase activity	5.37E-03
55	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.84E-03
56	GO:0080043: quercetin 3-O-glucosyltransferase activity	6.30E-03
57	GO:0080044: quercetin 7-O-glucosyltransferase activity	6.30E-03
58	GO:0031409: pigment binding	6.81E-03
59	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	6.81E-03
60	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	6.81E-03
61	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	6.81E-03
62	GO:0035251: UDP-glucosyltransferase activity	8.38E-03
63	GO:0004176: ATP-dependent peptidase activity	8.38E-03
64	GO:0016760: cellulose synthase (UDP-forming) activity	9.48E-03
65	GO:0004518: nuclease activity	1.44E-02
66	GO:0051015: actin filament binding	1.51E-02
67	GO:0008237: metallopeptidase activity	1.64E-02
68	GO:0005200: structural constituent of cytoskeleton	1.64E-02
69	GO:0004672: protein kinase activity	1.67E-02
70	GO:0015250: water channel activity	1.79E-02
71	GO:0046982: protein heterodimerization activity	1.82E-02
72	GO:0016168: chlorophyll binding	1.86E-02
73	GO:0016788: hydrolase activity, acting on ester bonds	1.89E-02
74	GO:0008375: acetylglucosaminyltransferase activity	1.93E-02
75	GO:0030247: polysaccharide binding	2.00E-02
76	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.08E-02
77	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.31E-02
78	GO:0004222: metalloendopeptidase activity	2.31E-02
79	GO:0050661: NADP binding	2.80E-02
80	GO:0004871: signal transducer activity	2.88E-02
81	GO:0004185: serine-type carboxypeptidase activity	3.06E-02
82	GO:0051537: 2 iron, 2 sulfur cluster binding	3.23E-02
83	GO:0003924: GTPase activity	3.39E-02
84	GO:0051287: NAD binding	3.50E-02
85	GO:0009055: electron carrier activity	3.64E-02
86	GO:0004674: protein serine/threonine kinase activity	3.70E-02
87	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.35E-02
88	GO:0005524: ATP binding	4.42E-02
89	GO:0016874: ligase activity	4.65E-02
90	GO:0022857: transmembrane transporter activity	4.65E-02
91	GO:0003779: actin binding	4.75E-02
92	GO:0015035: protein disulfide oxidoreductase activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0005794: Golgi apparatus	7.58E-06
2	GO:0000139: Golgi membrane	2.64E-04
3	GO:0042406: extrinsic component of endoplasmic reticulum membrane	5.26E-04
4	GO:0009509: chromoplast	5.26E-04
5	GO:0009506: plasmodesma	9.29E-04
6	GO:0000786: nucleosome	2.68E-03
7	GO:0009505: plant-type cell wall	3.54E-03
8	GO:0009941: chloroplast envelope	4.18E-03
9	GO:0019013: viral nucleocapsid	5.37E-03
10	GO:0030076: light-harvesting complex	6.32E-03
11	GO:0030176: integral component of endoplasmic reticulum membrane	6.32E-03
12	GO:0016021: integral component of membrane	8.30E-03
13	GO:0005886: plasma membrane	9.63E-03
14	GO:0009705: plant-type vacuole membrane	1.19E-02
15	GO:0009522: photosystem I	1.25E-02
16	GO:0009523: photosystem II	1.31E-02
17	GO:0046658: anchored component of plasma membrane	1.58E-02
18	GO:0010319: stromule	1.64E-02
19	GO:0009570: chloroplast stroma	2.32E-02
20	GO:0031225: anchored component of membrane	2.52E-02
21	GO:0009535: chloroplast thylakoid membrane	3.12E-02
22	GO:0005743: mitochondrial inner membrane	3.16E-02
23	GO:0005856: cytoskeleton	3.32E-02
24	GO:0043231: intracellular membrane-bounded organelle	3.74E-02
25	GO:0009536: plastid	4.47E-02
26	GO:0005737: cytoplasm	4.69E-02